RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 KIAA1683Q9H0B3 1180 aa8.73□□□□□ -1.01
TARDBP-210ENST00000496840 OR10A2Q9H208 303 aa8.73□□□□□ -1.01
TARDBP-210ENST00000496840 OAZ3Q9UMX2 235 aa8.73□□□□□ -1.01
TARDBP-210ENST00000496840 PLAAQ9Y263 795 aa8.73□□□□□ -1.01
TARDBP-210ENST00000496840 NR2E1Q9Y466 385 aa8.73□□□□□ -1.01
TARDBP-210ENST00000496840 SPO11Q9Y5K1 396 aa8.73□□□□□ -1.01
TARDBP-210ENST00000496840 UBA6A0AVT1 1052 aaPredicted RBP8.72□□□□□ -1.01
TARDBP-210ENST00000496840 ZNF623O75123 536 aa8.72□□□□□ -1.01
TARDBP-210ENST00000496840 MEOX1P50221 254 aa8.72□□□□□ -1.01
TARDBP-210ENST00000496840 TBR1Q16650 682 aa8.72□□□□□ -1.01
TARDBP-210ENST00000496840 NOP9Q86U38 636 aaKnown RBP8.72□□□□□ -1.01
TARDBP-210ENST00000496840 NIM1KQ8IY84 436 aa8.72□□□□□ -1.01
TARDBP-210ENST00000496840 RTKN2Q8IZC4 609 aa8.72□□□□□ -1.01
TARDBP-210ENST00000496840 BCL6BQ8N143 479 aaPredicted RBP8.72□□□□□ -1.01
TARDBP-210ENST00000496840 Q8TCH9 128 aa8.72□□□□□ -1.01
TARDBP-210ENST00000496840 WWC2-AS2Q96NR7 200 aa8.72□□□□□ -1.01
TARDBP-210ENST00000496840 CDK5RAP1Q96SZ6 601 aaKnown RBP8.72□□□□□ -1.01
TARDBP-210ENST00000496840 ZKSCAN5Q9Y2L8 839 aa8.72□□□□□ -1.01
TARDBP-210ENST00000496840 VWA7Q9Y334 891 aa8.72□□□□□ -1.01
TARDBP-210ENST00000496840 TSC22D4Q9Y3Q8 395 aa8.72□□□□□ -1.01
TARDBP-210ENST00000496840 F2P00734 622 aa8.71□□□□□ -1.02
TARDBP-210ENST00000496840 CR2P20023 1033 aa8.71□□□□□ -1.02
TARDBP-210ENST00000496840 SELENOPP49908 381 aa8.71□□□□□ -1.02
TARDBP-210ENST00000496840 MRE11P49959 708 aa8.71□□□□□ -1.02
TARDBP-210ENST00000496840 SLC6A3Q01959 620 aa8.71□□□□□ -1.02
TARDBP-210ENST00000496840 TTC38Q5R3I4 469 aa8.71□□□□□ -1.02
TARDBP-210ENST00000496840 FILIP1Q7Z7B0 1213 aa8.71□□□□□ -1.02
TARDBP-210ENST00000496840 KIAA0907Q7Z7F0 614 aaPredicted RBP8.71□□□□□ -1.02
TARDBP-210ENST00000496840 GGNQ86UU5 652 aa8.71□□□□□ -1.02
TARDBP-210ENST00000496840 TAX1BP1Q86VP1 789 aa8.71□□□□□ -1.02
TARDBP-210ENST00000496840 GIMAP8Q8ND71 665 aaPredicted RBP8.71□□□□□ -1.02
TARDBP-210ENST00000496840 KLC2Q9H0B6 622 aa8.71□□□□□ -1.02
TARDBP-210ENST00000496840 SEMA4AQ9H3S1 761 aa8.71□□□□□ -1.02
TARDBP-210ENST00000496840 TCAF1Q9Y4C2 921 aa8.71□□□□□ -1.02
TARDBP-210ENST00000496840 MATN2O00339 956 aa8.7□□□□□ -1.02
TARDBP-210ENST00000496840 ENPP3O14638 875 aa8.7□□□□□ -1.02
TARDBP-210ENST00000496840 FOXS1O43638 330 aa8.7□□□□□ -1.02
TARDBP-210ENST00000496840 PTX3P26022 381 aaPredicted RBP8.7□□□□□ -1.02
TARDBP-210ENST00000496840 RGS3P49796 1198 aa8.7□□□□□ -1.02
TARDBP-210ENST00000496840 DSG1Q02413 1049 aa8.7□□□□□ -1.02
TARDBP-210ENST00000496840 ADCY1Q08828 1119 aa8.7□□□□□ -1.02
TARDBP-210ENST00000496840 C21orf62-AS1Q17RA5 79 aa8.7□□□□□ -1.02
TARDBP-210ENST00000496840 SLFN12LQ6IEE8 588 aa8.7□□□□□ -1.02
TARDBP-210ENST00000496840 CFHR4Q92496 578 aa8.7□□□□□ -1.02
TARDBP-210ENST00000496840 ELF4Q99607 663 aaPredicted RBP8.7□□□□□ -1.02
TARDBP-210ENST00000496840 MTFR1LQ9H019 292 aa8.7□□□□□ -1.02
TARDBP-210ENST00000496840 DEF6Q9H4E7 631 aa8.7□□□□□ -1.02
TARDBP-210ENST00000496840 OXSMQ9NWU1 459 aa8.7□□□□□ -1.02
TARDBP-210ENST00000496840 ZFR2Q9UPR6 939 aaKnown RBP8.7□□□□□ -1.02
TARDBP-210ENST00000496840 JAG2Q9Y219 1238 aa8.7□□□□□ -1.02
TARDBP-210ENST00000496840 PMS2P1A4D2B8 440 aa8.69□□□□□ -1.02
TARDBP-210ENST00000496840 KPNA6O60684 536 aa8.69□□□□□ -1.02
TARDBP-210ENST00000496840 GAS7O60861 476 aa8.69□□□□□ -1.02
TARDBP-210ENST00000496840 INSRRP14616 1297 aa8.69□□□□□ -1.02
TARDBP-210ENST00000496840 ATP2A2P16615 1042 aaKnown RBP8.69□□□□□ -1.02
TARDBP-210ENST00000496840 SLC9A1P19634 815 aa8.69□□□□□ -1.02
TARDBP-210ENST00000496840 STAT5BP51692 787 aa8.69□□□□□ -1.02
TARDBP-210ENST00000496840 NEK4P51957 841 aa8.69□□□□□ -1.02
TARDBP-210ENST00000496840 HGFACQ04756 655 aa8.69□□□□□ -1.02
TARDBP-210ENST00000496840 DUSP8Q13202 625 aa8.69□□□□□ -1.02
TARDBP-210ENST00000496840 CDSNQ15517 529 aa8.69□□□□□ -1.02
TARDBP-210ENST00000496840 DALRD3Q5D0E6 543 aaKnown RBP8.69□□□□□ -1.02
TARDBP-210ENST00000496840 ZZZ3Q8IYH5 903 aa8.69□□□□□ -1.02
TARDBP-210ENST00000496840 PPM1KQ8N3J5 372 aa8.69□□□□□ -1.02
TARDBP-210ENST00000496840 LPPQ93052 612 aa8.69□□□□□ -1.02
TARDBP-210ENST00000496840 MFSD3Q96ES6 412 aa8.69□□□□□ -1.02
TARDBP-210ENST00000496840 PUF60Q9UHX1 559 aaKnown RBP8.69□□□□□ -1.02
TARDBP-210ENST00000496840 SLC30A1Q9Y6M5 507 aa8.69□□□□□ -1.02
TARDBP-210ENST00000496840 RAD17O75943 681 aa8.68□□□□□ -1.02
TARDBP-210ENST00000496840 SESN2P58004 480 aaPredicted RBP8.68□□□□□ -1.02
TARDBP-210ENST00000496840 NOLC1Q14978 699 aaKnown RBP eCLIP8.68□□□□□ -1.02
TARDBP-210ENST00000496840 R3HDM1Q15032 1099 aaKnown RBP8.68□□□□□ -1.02
TARDBP-210ENST00000496840 ESRP1Q6NXG1 681 aaKnown RBP8.68□□□□□ -1.02
TARDBP-210ENST00000496840 EFHBQ8N7U6 833 aa8.68□□□□□ -1.02
TARDBP-210ENST00000496840 DPYSL5Q9BPU6 564 aa8.68□□□□□ -1.02
TARDBP-210ENST00000496840 IFT57Q9NWB7 429 aa8.68□□□□□ -1.02
TARDBP-210ENST00000496840 KCMF1Q9P0J7 381 aa8.68□□□□□ -1.02
TARDBP-210ENST00000496840 CDC14BO60729 498 aa8.67□□□□□ -1.02
TARDBP-210ENST00000496840 RPS19P39019 145 aaKnown RBP8.67□□□□□ -1.02
TARDBP-210ENST00000496840 DGKDQ16760 1214 aa8.67□□□□□ -1.02
TARDBP-210ENST00000496840 HS1BP3Q53T59 392 aa8.67□□□□□ -1.02
TARDBP-210ENST00000496840 ZNF585AQ6P3V2 769 aa8.67□□□□□ -1.02
TARDBP-210ENST00000496840 KLHDC10Q6PID8 442 aa8.67□□□□□ -1.02
TARDBP-210ENST00000496840 DHX37Q8IY37 1157 aaKnown RBP8.67□□□□□ -1.02
TARDBP-210ENST00000496840 FUKQ8N0W3 1084 aa8.67□□□□□ -1.02
TARDBP-210ENST00000496840 AHI1Q8N157 1196 aa8.67□□□□□ -1.02
TARDBP-210ENST00000496840 OR5AN1Q8NGI8 311 aa8.67□□□□□ -1.02
TARDBP-210ENST00000496840 TUBGCP5Q96RT8 1024 aa8.67□□□□□ -1.02
TARDBP-210ENST00000496840 SAE1Q9UBE0 346 aaPredicted RBP8.67□□□□□ -1.02
TARDBP-210ENST00000496840 TBX22Q9Y458 520 aa8.67□□□□□ -1.02
TARDBP-210ENST00000496840 TESMINQ9Y4I5 508 aa8.67□□□□□ -1.02
TARDBP-210ENST00000496840 CTDP1Q9Y5B0 961 aaPredicted RBP8.67□□□□□ -1.02
TARDBP-210ENST00000496840 BCAR1P56945 870 aa8.66□□□□□ -1.02
TARDBP-210ENST00000496840 CNNM4Q6P4Q7 775 aa8.66□□□□□ -1.02
TARDBP-210ENST00000496840 BMP8AQ7Z5Y6 402 aa8.66□□□□□ -1.02
TARDBP-210ENST00000496840 PHYKPLQ8IUZ5 450 aa8.66□□□□□ -1.02
TARDBP-210ENST00000496840 HAPLN2Q9GZV7 340 aa8.66□□□□□ -1.02
TARDBP-210ENST00000496840 TOMM22Q9NS69 142 aa8.66□□□□□ -1.02
TARDBP-210ENST00000496840 ZNF891A8MT65 544 aaPredicted RBP8.65□□□□□ -1.02
TARDBP-210ENST00000496840 MUSKO15146 869 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms