RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 WRAP73Q9P2S5 460 aaPredicted RBP21.51■■□□□ 1.03
CTDSP1-213ENST00000496785 MSRAQ9UJ68 235 aa21.51■■□□□ 1.03
CTDSP1-213ENST00000496785 IGKV6-21A0A0C4DH24 114 aa21.5■■□□□ 1.03
CTDSP1-213ENST00000496785 AMHP03971 560 aa21.5■■□□□ 1.03
CTDSP1-213ENST00000496785 RPA1P27694 616 aa21.5■■□□□ 1.03
CTDSP1-213ENST00000496785 CRYBB1P53674 252 aaPredicted RBP21.5■■□□□ 1.03
CTDSP1-213ENST00000496785 WDR5P61964 334 aaKnown RBP21.5■■□□□ 1.03
CTDSP1-213ENST00000496785 LPIN1Q14693 890 aa21.5■■□□□ 1.03
CTDSP1-213ENST00000496785 XKR9Q5GH70 373 aa21.5■■□□□ 1.03
CTDSP1-213ENST00000496785 FERMT3Q86UX7 667 aa21.5■■□□□ 1.03
CTDSP1-213ENST00000496785 LRRC71Q8N4P6 559 aa21.5■■□□□ 1.03
CTDSP1-213ENST00000496785 FTHL17Q9BXU8 183 aa21.5■■□□□ 1.03
CTDSP1-213ENST00000496785 GINS2Q9Y248 185 aa21.5■■□□□ 1.03
CTDSP1-213ENST00000496785 TMEM150BA6NC51 233 aa21.49■■□□□ 1.03
CTDSP1-213ENST00000496785 VTNP04004 478 aa21.49■■□□□ 1.03
CTDSP1-213ENST00000496785 PAK2Q13177 524 aa21.49■■□□□ 1.03
CTDSP1-213ENST00000496785 FAM109BQ6ICB4 259 aaPredicted RBP21.49■■□□□ 1.03
CTDSP1-213ENST00000496785 IGSF22Q8N9C0 903 aa21.49■■□□□ 1.03
CTDSP1-213ENST00000496785 TCP11Q8WWU5 503 aa21.49■■□□□ 1.03
CTDSP1-213ENST00000496785 SCLT1Q96NL6 688 aa21.49■■□□□ 1.03
CTDSP1-213ENST00000496785 NACC1Q96RE7 527 aa21.49■■□□□ 1.03
CTDSP1-213ENST00000496785 CEP89Q96ST8 783 aa21.49■■□□□ 1.03
CTDSP1-213ENST00000496785 TET1Q8NFU7 2136 aa21.49■■□□□ 1.03
CTDSP1-213ENST00000496785 DNAJB2P25686 324 aa21.48■■□□□ 1.03
CTDSP1-213ENST00000496785 NPEPPSP55786 919 aa21.48■■□□□ 1.03
CTDSP1-213ENST00000496785 BECN1Q14457 450 aa21.48■■□□□ 1.03
CTDSP1-213ENST00000496785 KIZQ2M2Z5 673 aa21.48■■□□□ 1.03
CTDSP1-213ENST00000496785 ZNF697Q5TEC3 545 aa21.48■■□□□ 1.03
CTDSP1-213ENST00000496785 KRT79Q5XKE5 535 aa21.48■■□□□ 1.03
CTDSP1-213ENST00000496785 CATSPER3Q86XQ3 398 aa21.48■■□□□ 1.03
CTDSP1-213ENST00000496785 DHX33Q9H6R0 707 aaKnown RBP21.48■■□□□ 1.03
CTDSP1-213ENST00000496785 MTMR6Q9Y217 621 aa21.48■■□□□ 1.03
CTDSP1-213ENST00000496785 PCDHA11Q9Y5I1 949 aa21.48■■□□□ 1.03
CTDSP1-213ENST00000496785 EVPLQ92817 2033 aa21.47■■□□□ 1.03
CTDSP1-213ENST00000496785 GPR182O15218 404 aa21.47■■□□□ 1.03
CTDSP1-213ENST00000496785 RPS6KA5O75582 802 aa21.47■■□□□ 1.03
CTDSP1-213ENST00000496785 DGAT1O75907 488 aa21.47■■□□□ 1.03
CTDSP1-213ENST00000496785 SPATA31C1P0DKV0 1188 aa21.47■■□□□ 1.03
CTDSP1-213ENST00000496785 CCT6AP40227 531 aaKnown RBP21.47■■□□□ 1.03
CTDSP1-213ENST00000496785 NLRP11P59045 1033 aaKnown RBP21.47■■□□□ 1.03
CTDSP1-213ENST00000496785 RESTQ13127 1097 aa21.47■■□□□ 1.03
CTDSP1-213ENST00000496785 HERC6Q8IVU3 1022 aa21.47■■□□□ 1.03
CTDSP1-213ENST00000496785 SNX29Q8TEQ0 813 aa21.47■■□□□ 1.03
CTDSP1-213ENST00000496785 PSPC1Q8WXF1 523 aaKnown RBP21.47■■□□□ 1.03
CTDSP1-213ENST00000496785 MTRQ99707 1265 aa21.47■■□□□ 1.03
CTDSP1-213ENST00000496785 SH2D3AQ9BRG2 576 aa21.47■■□□□ 1.03
CTDSP1-213ENST00000496785 DBR1Q9UK59 544 aaKnown RBP21.47■■□□□ 1.03
CTDSP1-213ENST00000496785 SIP14410 1827 aa21.46■■□□□ 1.03
CTDSP1-213ENST00000496785 GPR32O75388 356 aa21.46■■□□□ 1.03
CTDSP1-213ENST00000496785 MED24O75448 989 aa21.46■■□□□ 1.03
CTDSP1-213ENST00000496785 CD52P31358 61 aa21.46■■□□□ 1.03
CTDSP1-213ENST00000496785 GPC3P51654 580 aa21.46■■□□□ 1.03
CTDSP1-213ENST00000496785 EMC2Q15006 297 aa21.46■■□□□ 1.03
CTDSP1-213ENST00000496785 ZNF410Q86VK4 478 aa21.46■■□□□ 1.03
CTDSP1-213ENST00000496785 KCTD17Q8N5Z5 321 aa21.46■■□□□ 1.03
CTDSP1-213ENST00000496785 NLRP7Q8WX94 980 aa21.46■■□□□ 1.03
CTDSP1-213ENST00000496785 TIFAQ96CG3 184 aa21.46■■□□□ 1.03
CTDSP1-213ENST00000496785 OSMRQ99650 979 aa21.46■■□□□ 1.03
CTDSP1-213ENST00000496785 ZBED2Q9BTP6 218 aa21.46■■□□□ 1.03
CTDSP1-213ENST00000496785 PBX4Q9BYU1 374 aa21.46■■□□□ 1.03
CTDSP1-213ENST00000496785 INO80BQ9C086 356 aaPredicted RBP21.46■■□□□ 1.03
CTDSP1-213ENST00000496785 ATP6V0A4Q9HBG4 840 aa21.46■■□□□ 1.03
CTDSP1-213ENST00000496785 RNF216Q9NWF9 866 aaPredicted RBP21.46■■□□□ 1.03
CTDSP1-213ENST00000496785 SUCLA2Q9P2R7 463 aaPredicted RBP21.46■■□□□ 1.03
CTDSP1-213ENST00000496785 PADI3Q9ULW8 664 aa21.46■■□□□ 1.03
CTDSP1-213ENST00000496785 ASAP2O43150 1006 aa21.45■■□□□ 1.02
CTDSP1-213ENST00000496785 RARRES1P49788 294 aa21.45■■□□□ 1.02
CTDSP1-213ENST00000496785 SF3A1Q15459 793 aaKnown RBP21.45■■□□□ 1.02
CTDSP1-213ENST00000496785 MYOCDQ8IZQ8 938 aa21.45■■□□□ 1.02
CTDSP1-213ENST00000496785 AK8Q96MA6 479 aa21.45■■□□□ 1.02
CTDSP1-213ENST00000496785 GCOM2Q9BZD3 368 aaPredicted RBP21.45■■□□□ 1.02
CTDSP1-213ENST00000496785 AGO3Q9H9G7 860 aaKnown RBP21.45■■□□□ 1.02
CTDSP1-213ENST00000496785 VWA3AA6NCI4 1184 aa21.44■■□□□ 1.02
CTDSP1-213ENST00000496785 GRXCR1A8MXD5 290 aa21.44■■□□□ 1.02
CTDSP1-213ENST00000496785 SLC26A4O43511 780 aa21.44■■□□□ 1.02
CTDSP1-213ENST00000496785 EIF4BP23588 611 aaKnown RBP21.44■■□□□ 1.02
CTDSP1-213ENST00000496785 NFX1Q12986 1120 aaKnown RBP21.44■■□□□ 1.02
CTDSP1-213ENST00000496785 MKRN4PQ13434 485 aaPredicted RBP21.44■■□□□ 1.02
CTDSP1-213ENST00000496785 TCTN1Q2MV58 587 aa21.44■■□□□ 1.02
CTDSP1-213ENST00000496785 POTEGQ6S5H5 508 aa21.44■■□□□ 1.02
CTDSP1-213ENST00000496785 RHPN2Q8IUC4 686 aa21.44■■□□□ 1.02
CTDSP1-213ENST00000496785 PIGOQ8TEQ8 1089 aa21.44■■□□□ 1.02
CTDSP1-213ENST00000496785 PPP1R16BQ96T49 567 aa21.44■■□□□ 1.02
CTDSP1-213ENST00000496785 OSBPL7Q9BZF2 842 aa21.44■■□□□ 1.02
CTDSP1-213ENST00000496785 ADAMTS10Q9H324 1103 aa21.44■■□□□ 1.02
CTDSP1-213ENST00000496785 NOC2LQ9Y3T9 749 aaKnown RBP21.44■■□□□ 1.02
CTDSP1-213ENST00000496785 COL4A3BPQ9Y5P4 624 aa21.44■■□□□ 1.02
CTDSP1-213ENST00000496785 MICAL3Q7RTP6 2002 aa21.43■■□□□ 1.02
CTDSP1-213ENST00000496785 ARHGEF35A5YM69 484 aa21.43■■□□□ 1.02
CTDSP1-213ENST00000496785 ZBTB39O15060 712 aa21.43■■□□□ 1.02
CTDSP1-213ENST00000496785 TLL1O43897 1013 aa21.43■■□□□ 1.02
CTDSP1-213ENST00000496785 GJB5O95377 273 aa21.43■■□□□ 1.02
CTDSP1-213ENST00000496785 DEFB103AP81534 67 aa21.43■■□□□ 1.02
CTDSP1-213ENST00000496785 MXD4Q14582 209 aaPredicted RBP21.43■■□□□ 1.02
CTDSP1-213ENST00000496785 DEFB123Q8N688 67 aa21.43■■□□□ 1.02
CTDSP1-213ENST00000496785 ZNF579Q8NAF0 562 aaKnown RBP21.43■■□□□ 1.02
CTDSP1-213ENST00000496785 MCPH1Q8NEM0 835 aa21.43■■□□□ 1.02
CTDSP1-213ENST00000496785 NT5C3AQ9H0P0 336 aa21.43■■□□□ 1.02
CTDSP1-213ENST00000496785 SLC28A3Q9HAS3 691 aa21.43■■□□□ 1.02
CTDSP1-213ENST00000496785 CDHR5Q9HBB8 845 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms