RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 TRAF5O00463 557 aa5.5□□□□□ -1.53
CD46-218ENST00000496723 ZNF202O95125 648 aa5.5□□□□□ -1.53
CD46-218ENST00000496723 MMEP08473 750 aa5.5□□□□□ -1.53
CD46-218ENST00000496723 ZNF888P0CJ79 500 aaPredicted RBP5.5□□□□□ -1.53
CD46-218ENST00000496723 ZBTB48P10074 688 aaPredicted RBP5.5□□□□□ -1.53
CD46-218ENST00000496723 ACO1P21399 889 aaKnown RBP5.5□□□□□ -1.53
CD46-218ENST00000496723 NEK4P51957 841 aa5.5□□□□□ -1.53
CD46-218ENST00000496723 HERVK_113P62684 666 aa5.5□□□□□ -1.53
CD46-218ENST00000496723 DPTQ07507 201 aa5.5□□□□□ -1.53
CD46-218ENST00000496723 TOP3AQ13472 1001 aaPredicted RBP5.5□□□□□ -1.53
CD46-218ENST00000496723 TMEM132BQ14DG7 1078 aa5.5□□□□□ -1.53
CD46-218ENST00000496723 ARHGAP44Q17R89 818 aa5.5□□□□□ -1.53
CD46-218ENST00000496723 DALRD3Q5D0E6 543 aaKnown RBP5.5□□□□□ -1.53
CD46-218ENST00000496723 CNNM4Q6P4Q7 775 aa5.5□□□□□ -1.53
CD46-218ENST00000496723 OTOP1Q7RTM1 612 aa5.5□□□□□ -1.53
CD46-218ENST00000496723 KIAA0907Q7Z7F0 614 aaPredicted RBP5.5□□□□□ -1.53
CD46-218ENST00000496723 LRRTM3Q86VH5 581 aa5.5□□□□□ -1.53
CD46-218ENST00000496723 DLG3Q92796 817 aa5.5□□□□□ -1.53
CD46-218ENST00000496723 FAM89AQ96GI7 184 aa5.5□□□□□ -1.53
CD46-218ENST00000496723 TACO1Q9BSH4 297 aaKnown RBP5.5□□□□□ -1.53
CD46-218ENST00000496723 CSRNP2Q9H175 543 aa5.5□□□□□ -1.53
CD46-218ENST00000496723 C11orf21Q9P2W6 132 aa5.5□□□□□ -1.53
CD46-218ENST00000496723 PLAAQ9Y263 795 aa5.5□□□□□ -1.53
CD46-218ENST00000496723 B3GALT1Q9Y5Z6 326 aa5.5□□□□□ -1.53
CD46-218ENST00000496723 PTPDC1A2A3K4 754 aa5.49□□□□□ -1.53
CD46-218ENST00000496723 CBX4O00257 560 aa5.49□□□□□ -1.53
CD46-218ENST00000496723 NARSO43776 548 aaKnown RBP5.49□□□□□ -1.53
CD46-218ENST00000496723 KPNA6O60684 536 aa5.49□□□□□ -1.53
CD46-218ENST00000496723 PTGS1P23219 599 aa5.49□□□□□ -1.53
CD46-218ENST00000496723 AOAHP28039 575 aa5.49□□□□□ -1.53
CD46-218ENST00000496723 MC4RP32245 332 aa5.49□□□□□ -1.53
CD46-218ENST00000496723 PTH1RQ03431 593 aa5.49□□□□□ -1.53
CD46-218ENST00000496723 SMN1Q16637 294 aaKnown RBP5.49□□□□□ -1.53
CD46-218ENST00000496723 Q6ZSN1 163 aa5.49□□□□□ -1.53
CD46-218ENST00000496723 EXTL1Q92935 676 aa5.49□□□□□ -1.53
CD46-218ENST00000496723 BTBD7Q9P203 1132 aa5.49□□□□□ -1.53
CD46-218ENST00000496723 PTPN22Q9Y2R2 807 aa5.49□□□□□ -1.53
CD46-218ENST00000496723 RASSF10A6NK89 507 aa5.48□□□□□ -1.53
CD46-218ENST00000496723 FOXP2O15409 715 aa5.48□□□□□ -1.53
CD46-218ENST00000496723 RPS19P39019 145 aaKnown RBP5.48□□□□□ -1.53
CD46-218ENST00000496723 ETV4P43268 484 aa5.48□□□□□ -1.53
CD46-218ENST00000496723 INHBEP58166 350 aa5.48□□□□□ -1.53
CD46-218ENST00000496723 NFYCQ13952 458 aa5.48□□□□□ -1.53
CD46-218ENST00000496723 RNF151Q2KHN1 245 aa5.48□□□□□ -1.53
CD46-218ENST00000496723 LSM12Q3MHD2 195 aaKnown RBP5.48□□□□□ -1.53
CD46-218ENST00000496723 PLEKHG4Q58EX7 1191 aa5.48□□□□□ -1.53
CD46-218ENST00000496723 MAMDC4Q6UXC1 1216 aa5.48□□□□□ -1.53
CD46-218ENST00000496723 CXXC5Q7LFL8 322 aaKnown RBP5.48□□□□□ -1.53
CD46-218ENST00000496723 ASB15Q8WXK1 588 aa5.48□□□□□ -1.53
CD46-218ENST00000496723 CHFRQ96EP1 664 aa5.48□□□□□ -1.53
CD46-218ENST00000496723 MFSD3Q96ES6 412 aa5.48□□□□□ -1.53
CD46-218ENST00000496723 GBP4Q96PP9 640 aa5.48□□□□□ -1.53
CD46-218ENST00000496723 INCENPQ9NQS7 918 aa5.48□□□□□ -1.53
CD46-218ENST00000496723 UCKL1Q9NWZ5 548 aa5.48□□□□□ -1.53
CD46-218ENST00000496723 B4GALT6Q9UBX8 382 aa5.48□□□□□ -1.53
CD46-218ENST00000496723 FBXO10Q9UK96 956 aa5.48□□□□□ -1.53
CD46-218ENST00000496723 FAM83GA6ND36 823 aa5.47□□□□□ -1.53
CD46-218ENST00000496723 PLSCR1O15162 318 aa5.47□□□□□ -1.53
CD46-218ENST00000496723 CDC14BO60729 498 aa5.47□□□□□ -1.53
CD46-218ENST00000496723 SDHAP31040 664 aa5.47□□□□□ -1.53
CD46-218ENST00000496723 KIF11P52732 1056 aa5.47□□□□□ -1.53
CD46-218ENST00000496723 KRTAP1-1Q07627 177 aa5.47□□□□□ -1.53
CD46-218ENST00000496723 CATSPEREQ5SY80 951 aa5.47□□□□□ -1.53
CD46-218ENST00000496723 SDE2Q6IQ49 451 aa5.47□□□□□ -1.53
CD46-218ENST00000496723 C1orf210Q8IVY1 113 aa5.47□□□□□ -1.53
CD46-218ENST00000496723 HIPK4Q8NE63 616 aa5.47□□□□□ -1.53
CD46-218ENST00000496723 CEP89Q96ST8 783 aa5.47□□□□□ -1.53
CD46-218ENST00000496723 TARS2Q9BW92 718 aaKnown RBP5.47□□□□□ -1.53
CD46-218ENST00000496723 TRIM8Q9BZR9 551 aa5.47□□□□□ -1.53
CD46-218ENST00000496723 AURKAIP1Q9NWT8 199 aaPredicted RBP5.47□□□□□ -1.53
CD46-218ENST00000496723 GALNT8Q9NY28 637 aa5.47□□□□□ -1.53
CD46-218ENST00000496723 NR2E1Q9Y466 385 aa5.47□□□□□ -1.53
CD46-218ENST00000496723 PRAMEF22A3QJZ6 481 aa5.46□□□□□ -1.54
CD46-218ENST00000496723 H7C1D1 291 aa5.46□□□□□ -1.54
CD46-218ENST00000496723 DVL2O14641 736 aa5.46□□□□□ -1.54
CD46-218ENST00000496723 MPIG6BO95866 241 aa5.46□□□□□ -1.54
CD46-218ENST00000496723 POU3F2P20265 443 aaPredicted RBP5.46□□□□□ -1.54
CD46-218ENST00000496723 HSD3B2P26439 372 aa5.46□□□□□ -1.54
CD46-218ENST00000496723 GYS2P54840 703 aa5.46□□□□□ -1.54
CD46-218ENST00000496723 PCBP1Q15365 356 aaKnown RBP eCLIP5.46□□□□□ -1.54
CD46-218ENST00000496723 ZNF174Q15697 407 aa5.46□□□□□ -1.54
CD46-218ENST00000496723 IGFL4Q6B9Z1 124 aa5.46□□□□□ -1.54
CD46-218ENST00000496723 CC2D1AQ6P1N0 951 aaPredicted RBP5.46□□□□□ -1.54
CD46-218ENST00000496723 ERCC4Q92889 916 aaPredicted RBP5.46□□□□□ -1.54
CD46-218ENST00000496723 DPYSL5Q9BPU6 564 aa5.46□□□□□ -1.54
CD46-218ENST00000496723 AMNQ9BXJ7 453 aa5.46□□□□□ -1.54
CD46-218ENST00000496723 ZDHHC5Q9C0B5 715 aa5.46□□□□□ -1.54
CD46-218ENST00000496723 MTFR1LQ9H019 292 aa5.46□□□□□ -1.54
CD46-218ENST00000496723 PCIF1Q9H4Z3 704 aa5.46□□□□□ -1.54
CD46-218ENST00000496723 ZKSCAN5Q9Y2L8 839 aa5.46□□□□□ -1.54
CD46-218ENST00000496723 ASB1Q9Y576 335 aa5.46□□□□□ -1.54
CD46-218ENST00000496723 GOLGA6L22H0YM25 854 aa5.45□□□□□ -1.54
CD46-218ENST00000496723 ARHGAP6O43182 974 aa5.45□□□□□ -1.54
CD46-218ENST00000496723 MYCLP1P12525 358 aaPredicted RBP5.45□□□□□ -1.54
CD46-218ENST00000496723 ACRV1P26436 265 aa5.45□□□□□ -1.54
CD46-218ENST00000496723 INHBCP55103 352 aa5.45□□□□□ -1.54
CD46-218ENST00000496723 DUSP8Q13202 625 aa5.45□□□□□ -1.54
CD46-218ENST00000496723 WDR72Q3MJ13 1102 aa5.45□□□□□ -1.54
CD46-218ENST00000496723 TAF7LQ5H9L4 462 aa5.45□□□□□ -1.54
CD46-218ENST00000496723 LRSAM1Q6UWE0 723 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms