RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 TGS1Q96RS0 853 aaKnown RBP13.75□□□□□ -0.21
HDLBP-246ENST00000496569 ERVK-5Q9HDB9 667 aa13.75□□□□□ -0.21
HDLBP-246ENST00000496569 AKT3Q9Y243 479 aa13.75□□□□□ -0.21
HDLBP-246ENST00000496569 INSL6Q9Y581 213 aa13.75□□□□□ -0.21
HDLBP-246ENST00000496569 XIRP2A4UGR9 3374 aa13.74□□□□□ -0.21
HDLBP-246ENST00000496569 KDM3AQ9Y4C1 1321 aa13.74□□□□□ -0.21
HDLBP-246ENST00000496569 EIF5BO60841 1220 aaKnown RBP13.74□□□□□ -0.21
HDLBP-246ENST00000496569 GPR32O75388 356 aa13.74□□□□□ -0.21
HDLBP-246ENST00000496569 CSDE1O75534 798 aaKnown RBP13.74□□□□□ -0.21
HDLBP-246ENST00000496569 PAN2Q504Q3 1202 aaKnown RBP13.74□□□□□ -0.21
HDLBP-246ENST00000496569 PPP4R3AQ6IN85 833 aa13.74□□□□□ -0.21
HDLBP-246ENST00000496569 ZNF579Q8NAF0 562 aaKnown RBP13.74□□□□□ -0.21
HDLBP-246ENST00000496569 CEP89Q96ST8 783 aa13.74□□□□□ -0.21
HDLBP-246ENST00000496569 COL25A1Q9BXS0 654 aaPredicted RBP13.74□□□□□ -0.21
HDLBP-246ENST00000496569 BRMS1Q9HCU9 246 aa13.74□□□□□ -0.21
HDLBP-246ENST00000496569 RGL1Q9NZL6 768 aa13.74□□□□□ -0.21
HDLBP-246ENST00000496569 ADGRA3Q8IWK6 1321 aa13.73□□□□□ -0.21
HDLBP-246ENST00000496569 DDX11L8A8MPP1 907 aa13.73□□□□□ -0.21
HDLBP-246ENST00000496569 MARCH6O60337 910 aa13.73□□□□□ -0.21
HDLBP-246ENST00000496569 RPS6KA5O75582 802 aa13.73□□□□□ -0.21
HDLBP-246ENST00000496569 GCFC2P16383 781 aaKnown RBP13.73□□□□□ -0.21
HDLBP-246ENST00000496569 RBM25P49756 843 aaKnown RBP13.73□□□□□ -0.21
HDLBP-246ENST00000496569 NPEPPSP55786 919 aa13.73□□□□□ -0.21
HDLBP-246ENST00000496569 NLRP11P59045 1033 aaKnown RBP13.73□□□□□ -0.21
HDLBP-246ENST00000496569 CYP4A11Q02928 519 aa13.73□□□□□ -0.21
HDLBP-246ENST00000496569 TFF2Q03403 129 aa13.73□□□□□ -0.21
HDLBP-246ENST00000496569 SPIRE1Q08AE8 756 aa13.73□□□□□ -0.21
HDLBP-246ENST00000496569 PPP2R5CQ13362 524 aa13.73□□□□□ -0.21
HDLBP-246ENST00000496569 TRIM29Q14134 588 aa13.73□□□□□ -0.21
HDLBP-246ENST00000496569 SKIV2LQ15477 1246 aaKnown RBP13.73□□□□□ -0.21
HDLBP-246ENST00000496569 TARBP2Q15633 366 aaKnown RBP13.73□□□□□ -0.21
HDLBP-246ENST00000496569 NME8Q8N427 588 aa13.73□□□□□ -0.21
HDLBP-246ENST00000496569 FBXO22Q8NEZ5 403 aa13.73□□□□□ -0.21
HDLBP-246ENST00000496569 DYDC2Q96IM9 177 aa13.73□□□□□ -0.21
HDLBP-246ENST00000496569 TMEM60Q9H2L4 133 aa13.73□□□□□ -0.21
HDLBP-246ENST00000496569 RC3H2Q9HBD1 1191 aaKnown RBP13.73□□□□□ -0.21
HDLBP-246ENST00000496569 NRBP2Q9NSY0 501 aa13.73□□□□□ -0.21
HDLBP-246ENST00000496569 HCSTQ9UBK5 93 aa13.73□□□□□ -0.21
HDLBP-246ENST00000496569 CEP131Q9UPN4 1083 aa13.73□□□□□ -0.21
HDLBP-246ENST00000496569 NCOR1O75376 2440 aa13.73□□□□□ -0.21
HDLBP-246ENST00000496569 A0A087WWV3 80 aa13.72□□□□□ -0.21
HDLBP-246ENST00000496569 ZBTB39O15060 712 aa13.72□□□□□ -0.21
HDLBP-246ENST00000496569 GTPBP6O43824 516 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-246ENST00000496569 LINC00271P0C7V0 271 aa13.72□□□□□ -0.21
HDLBP-246ENST00000496569 TBC1D8BQ0IIM8 1120 aa13.72□□□□□ -0.21
HDLBP-246ENST00000496569 CTTNQ14247 550 aaKnown RBP13.72□□□□□ -0.21
HDLBP-246ENST00000496569 NBR1Q14596 966 aa13.72□□□□□ -0.21
HDLBP-246ENST00000496569 EPC2Q52LR7 807 aa13.72□□□□□ -0.21
HDLBP-246ENST00000496569 XKR3Q5GH77 459 aa13.72□□□□□ -0.21
HDLBP-246ENST00000496569 ANO5Q75V66 913 aa13.72□□□□□ -0.21
HDLBP-246ENST00000496569 RDM1Q8NG50 284 aa13.72□□□□□ -0.21
HDLBP-246ENST00000496569 C8orf76Q96K31 380 aa13.72□□□□□ -0.21
HDLBP-246ENST00000496569 MAP7D2Q96T17 732 aa13.72□□□□□ -0.21
HDLBP-246ENST00000496569 TSPYL2Q9H2G4 693 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-246ENST00000496569 ADAMTS10Q9H324 1103 aa13.72□□□□□ -0.21
HDLBP-246ENST00000496569 ST3GAL5Q9UNP4 418 aa13.72□□□□□ -0.21
HDLBP-246ENST00000496569 MAGEB2O15479 319 aa13.71□□□□□ -0.21
HDLBP-246ENST00000496569 RPLP2P05387 115 aaKnown RBP13.71□□□□□ -0.21
HDLBP-246ENST00000496569 CTNNB1P35222 781 aa13.71□□□□□ -0.21
HDLBP-246ENST00000496569 GPC3P51654 580 aa13.71□□□□□ -0.21
HDLBP-246ENST00000496569 CRYBB1P53674 252 aaPredicted RBP13.71□□□□□ -0.21
HDLBP-246ENST00000496569 PSMC5P62195 406 aa13.71□□□□□ -0.21
HDLBP-246ENST00000496569 KSR1Q8IVT5 923 aa13.71□□□□□ -0.21
HDLBP-246ENST00000496569 TMEM192Q8IY95 271 aa13.71□□□□□ -0.21
HDLBP-246ENST00000496569 FAM20AQ96MK3 541 aa13.71□□□□□ -0.21
HDLBP-246ENST00000496569 SCLT1Q96NL6 688 aa13.71□□□□□ -0.21
HDLBP-246ENST00000496569 ADAM2Q99965 735 aa13.71□□□□□ -0.21
HDLBP-246ENST00000496569 LXNQ9BS40 222 aa13.71□□□□□ -0.21
HDLBP-246ENST00000496569 THEGQ9P2T0 379 aa13.71□□□□□ -0.21
HDLBP-246ENST00000496569 MRPL42Q9Y6G3 142 aaKnown RBP13.71□□□□□ -0.21
HDLBP-246ENST00000496569 SQORQ9Y6N5 450 aa13.71□□□□□ -0.21
HDLBP-246ENST00000496569 MUC3AQ02505 3323 aa13.7□□□□□ -0.22
HDLBP-246ENST00000496569 POTEMA6NI47 508 aa13.7□□□□□ -0.22
HDLBP-246ENST00000496569 NEMFO60524 1076 aa13.7□□□□□ -0.22
HDLBP-246ENST00000496569 DGKIO75912 1065 aa13.7□□□□□ -0.22
HDLBP-246ENST00000496569 MCM7P33993 719 aa13.7□□□□□ -0.22
HDLBP-246ENST00000496569 TXKP42681 527 aa13.7□□□□□ -0.22
HDLBP-246ENST00000496569 QARSP47897 775 aaKnown RBP13.7□□□□□ -0.22
HDLBP-246ENST00000496569 BTG3Q14201 252 aaPredicted RBP13.7□□□□□ -0.22
HDLBP-246ENST00000496569 RABEP1Q15276 862 aa13.7□□□□□ -0.22
HDLBP-246ENST00000496569 CALCRLQ16602 461 aa13.7□□□□□ -0.22
HDLBP-246ENST00000496569 NPAS4Q8IUM7 802 aa13.7□□□□□ -0.22
HDLBP-246ENST00000496569 CRIPAKQ8N1N5 446 aa13.7□□□□□ -0.22
HDLBP-246ENST00000496569 FIBCD1Q8N539 461 aa13.7□□□□□ -0.22
HDLBP-246ENST00000496569 ZNF689Q96CS4 500 aaPredicted RBP13.7□□□□□ -0.22
HDLBP-246ENST00000496569 NIFKQ9BYG3 293 aaKnown RBP13.7□□□□□ -0.22
HDLBP-246ENST00000496569 A0A087WZ62 844 aa13.69□□□□□ -0.22
HDLBP-246ENST00000496569 DENND3A2RUS2 1198 aa13.69□□□□□ -0.22
HDLBP-246ENST00000496569 TBX3O15119 743 aa13.69□□□□□ -0.22
HDLBP-246ENST00000496569 P4HBP07237 508 aaKnown RBP13.69□□□□□ -0.22
HDLBP-246ENST00000496569 FGFR1P11362 822 aa13.69□□□□□ -0.22
HDLBP-246ENST00000496569 POU3F3P20264 500 aaPredicted RBP13.69□□□□□ -0.22
HDLBP-246ENST00000496569 TMOD1P28289 359 aa13.69□□□□□ -0.22
HDLBP-246ENST00000496569 GPM6BQ13491 265 aa13.69□□□□□ -0.22
HDLBP-246ENST00000496569 DSC3Q14574 896 aa13.69□□□□□ -0.22
HDLBP-246ENST00000496569 EPHA7Q15375 998 aa13.69□□□□□ -0.22
HDLBP-246ENST00000496569 ZNF174Q15697 407 aa13.69□□□□□ -0.22
HDLBP-246ENST00000496569 FAM102BQ5T8I3 360 aa13.69□□□□□ -0.22
HDLBP-246ENST00000496569 FAM184AQ8NB25 1140 aa13.69□□□□□ -0.22
HDLBP-246ENST00000496569 NLRP7Q8WX94 980 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms