RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 MRPL42Q9Y6G3 142 aaKnown RBP16.12■□□□□ 0.17
VTI1A-209ENST00000496445 ARID2Q68CP9 1835 aa16.12■□□□□ 0.17
VTI1A-209ENST00000496445 RPS6KA5O75582 802 aa16.11■□□□□ 0.17
VTI1A-209ENST00000496445 SFNP31947 248 aa16.11■□□□□ 0.17
VTI1A-209ENST00000496445 BMPR1AP36894 532 aa16.11■□□□□ 0.17
VTI1A-209ENST00000496445 GATMP50440 423 aa16.11■□□□□ 0.17
VTI1A-209ENST00000496445 BTG3Q14201 252 aaPredicted RBP16.11■□□□□ 0.17
VTI1A-209ENST00000496445 PTPROQ16827 1216 aa16.11■□□□□ 0.17
VTI1A-209ENST00000496445 TIGD5Q53EQ6 642 aa16.11■□□□□ 0.17
VTI1A-209ENST00000496445 KRT25Q7Z3Z0 450 aa16.11■□□□□ 0.17
VTI1A-209ENST00000496445 FAM228AQ86W67 206 aa16.11■□□□□ 0.17
VTI1A-209ENST00000496445 LRRC71Q8N4P6 559 aa16.11■□□□□ 0.17
VTI1A-209ENST00000496445 METTL13Q8N6R0 699 aa16.11■□□□□ 0.17
VTI1A-209ENST00000496445 OXER1Q8TDS5 423 aa16.11■□□□□ 0.17
VTI1A-209ENST00000496445 UBE2ZQ9H832 354 aaPredicted RBP16.11■□□□□ 0.17
VTI1A-209ENST00000496445 ST3GAL5Q9UNP4 418 aa16.11■□□□□ 0.17
VTI1A-209ENST00000496445 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.1■□□□□ 0.17
VTI1A-209ENST00000496445 GRM6O15303 877 aa16.1■□□□□ 0.17
VTI1A-209ENST00000496445 SARSP49591 514 aaKnown RBP16.1■□□□□ 0.17
VTI1A-209ENST00000496445 CRYBB1P53674 252 aaPredicted RBP16.1■□□□□ 0.17
VTI1A-209ENST00000496445 NFX1Q12986 1120 aaKnown RBP16.1■□□□□ 0.17
VTI1A-209ENST00000496445 ME3Q16798 604 aa16.1■□□□□ 0.17
VTI1A-209ENST00000496445 EARS2Q5JPH6 523 aaKnown RBP16.1■□□□□ 0.17
VTI1A-209ENST00000496445 MIER3Q7Z3K6 550 aa16.1■□□□□ 0.17
VTI1A-209ENST00000496445 CMTR2Q8IYT2 770 aaKnown RBP16.1■□□□□ 0.17
VTI1A-209ENST00000496445 BANK1Q8NDB2 785 aa16.1■□□□□ 0.17
VTI1A-209ENST00000496445 RDM1Q8NG50 284 aa16.1■□□□□ 0.17
VTI1A-209ENST00000496445 DDX25Q9UHL0 483 aaKnown RBP16.1■□□□□ 0.17
VTI1A-209ENST00000496445 RWDD3Q9Y3V2 267 aa16.1■□□□□ 0.17
VTI1A-209ENST00000496445 TMEM150BA6NC51 233 aa16.09■□□□□ 0.17
VTI1A-209ENST00000496445 MAGEB2O15479 319 aa16.09■□□□□ 0.17
VTI1A-209ENST00000496445 STBD1O95210 358 aa16.09■□□□□ 0.17
VTI1A-209ENST00000496445 SEC24BO95487 1268 aa16.09■□□□□ 0.17
VTI1A-209ENST00000496445 RB1P06400 928 aa16.09■□□□□ 0.17
VTI1A-209ENST00000496445 FDPSP14324 419 aaKnown RBP16.09■□□□□ 0.17
VTI1A-209ENST00000496445 ANKRD1Q15327 319 aa16.09■□□□□ 0.17
VTI1A-209ENST00000496445 TARBP2Q15633 366 aaKnown RBP16.09■□□□□ 0.17
VTI1A-209ENST00000496445 LETM2Q2VYF4 491 aa16.09■□□□□ 0.17
VTI1A-209ENST00000496445 PAN2Q504Q3 1202 aaKnown RBP16.09■□□□□ 0.17
VTI1A-209ENST00000496445 TCEAL5Q5H9L2 206 aa16.09■□□□□ 0.17
VTI1A-209ENST00000496445 EFCAB12Q6NXP0 572 aa16.09■□□□□ 0.17
VTI1A-209ENST00000496445 NECAB1Q8N987 351 aa16.09■□□□□ 0.17
VTI1A-209ENST00000496445 GTF3C6Q969F1 213 aa16.09■□□□□ 0.17
VTI1A-209ENST00000496445 CEP89Q96ST8 783 aa16.09■□□□□ 0.17
VTI1A-209ENST00000496445 C11orf84Q9BUA3 381 aaPredicted RBP16.09■□□□□ 0.17
VTI1A-209ENST00000496445 ADAMTS10Q9H324 1103 aa16.09■□□□□ 0.17
VTI1A-209ENST00000496445 KCNMB3Q9NPA1 279 aa16.09■□□□□ 0.17
VTI1A-209ENST00000496445 RGS18Q9NS28 235 aa16.09■□□□□ 0.17
VTI1A-209ENST00000496445 VAV3Q9UKW4 847 aa16.09■□□□□ 0.17
VTI1A-209ENST00000496445 AKT3Q9Y243 479 aa16.09■□□□□ 0.17
VTI1A-209ENST00000496445 CCDC194A0A1B0GVG4 234 aa16.08■□□□□ 0.16
VTI1A-209ENST00000496445 FAM205CA6NFA0 338 aa16.08■□□□□ 0.16
VTI1A-209ENST00000496445 C9IYK1 514 aa16.08■□□□□ 0.16
VTI1A-209ENST00000496445 STAG3L1P0CL83 205 aa16.08■□□□□ 0.16
VTI1A-209ENST00000496445 IBSPP21815 317 aaPredicted RBP16.08■□□□□ 0.16
VTI1A-209ENST00000496445 DRP2Q13474 957 aa16.08■□□□□ 0.16
VTI1A-209ENST00000496445 DSC3Q14574 896 aa16.08■□□□□ 0.16
VTI1A-209ENST00000496445 COL19A1Q14993 1142 aa16.08■□□□□ 0.16
VTI1A-209ENST00000496445 NEK8Q86SG6 692 aa16.08■□□□□ 0.16
VTI1A-209ENST00000496445 MAP7D2Q96T17 732 aa16.08■□□□□ 0.16
VTI1A-209ENST00000496445 ADAM2Q99965 735 aa16.08■□□□□ 0.16
VTI1A-209ENST00000496445 PLVAPQ9BX97 442 aa16.08■□□□□ 0.16
VTI1A-209ENST00000496445 NSUN3Q9H649 340 aaKnown RBP16.08■□□□□ 0.16
VTI1A-209ENST00000496445 NRBP2Q9NSY0 501 aa16.08■□□□□ 0.16
VTI1A-209ENST00000496445 ORC3Q9UBD5 711 aaPredicted RBP16.08■□□□□ 0.16
VTI1A-209ENST00000496445 SEPT9Q9UHD8 586 aaPredicted RBP16.08■□□□□ 0.16
VTI1A-209ENST00000496445 DENND3A2RUS2 1198 aa16.07■□□□□ 0.16
VTI1A-209ENST00000496445 EML1O00423 815 aa16.07■□□□□ 0.16
VTI1A-209ENST00000496445 GPR182O15218 404 aa16.07■□□□□ 0.16
VTI1A-209ENST00000496445 MMP1P03956 469 aa16.07■□□□□ 0.16
VTI1A-209ENST00000496445 KCNA5P22460 613 aa16.07■□□□□ 0.16
VTI1A-209ENST00000496445 GPC3P51654 580 aa16.07■□□□□ 0.16
VTI1A-209ENST00000496445 NLRP11P59045 1033 aaKnown RBP16.07■□□□□ 0.16
VTI1A-209ENST00000496445 ST3GAL1Q11201 340 aa16.07■□□□□ 0.16
VTI1A-209ENST00000496445 CAMK1Q14012 370 aa16.07■□□□□ 0.16
VTI1A-209ENST00000496445 PIK3AP1Q6ZUJ8 805 aa16.07■□□□□ 0.16
VTI1A-209ENST00000496445 NSUN7Q8NE18 718 aaKnown RBP16.07■□□□□ 0.16
VTI1A-209ENST00000496445 TNFRSF25Q93038 417 aa16.07■□□□□ 0.16
VTI1A-209ENST00000496445 ZNF668Q96K58 619 aaPredicted RBP16.07■□□□□ 0.16
VTI1A-209ENST00000496445 SH2D3AQ9BRG2 576 aa16.07■□□□□ 0.16
VTI1A-209ENST00000496445 NIFKQ9BYG3 293 aaKnown RBP16.07■□□□□ 0.16
VTI1A-209ENST00000496445 LMAN2LQ9H0V9 348 aa16.07■□□□□ 0.16
VTI1A-209ENST00000496445 ALG13Q9NP73 1137 aaKnown RBP16.07■□□□□ 0.16
VTI1A-209ENST00000496445 C1orf112Q9NSG2 853 aa16.07■□□□□ 0.16
VTI1A-209ENST00000496445 HCSTQ9UBK5 93 aa16.07■□□□□ 0.16
VTI1A-209ENST00000496445 LRFN2Q9ULH4 789 aa16.07■□□□□ 0.16
VTI1A-209ENST00000496445 CSPG5O95196 566 aa16.06■□□□□ 0.16
VTI1A-209ENST00000496445 XBP1P17861 261 aa16.06■□□□□ 0.16
VTI1A-209ENST00000496445 DNAJB1P25685 340 aa16.06■□□□□ 0.16
VTI1A-209ENST00000496445 TMOD1P28289 359 aa16.06■□□□□ 0.16
VTI1A-209ENST00000496445 TBC1D8BQ0IIM8 1120 aa16.06■□□□□ 0.16
VTI1A-209ENST00000496445 NR5A1Q13285 461 aa16.06■□□□□ 0.16
VTI1A-209ENST00000496445 PPP2R5CQ13362 524 aa16.06■□□□□ 0.16
VTI1A-209ENST00000496445 LEXMQ3ZCV2 418 aa16.06■□□□□ 0.16
VTI1A-209ENST00000496445 MTERF2Q49AM1 385 aa16.06■□□□□ 0.16
VTI1A-209ENST00000496445 XKR3Q5GH77 459 aa16.06■□□□□ 0.16
VTI1A-209ENST00000496445 ODR4Q5SWX8 454 aa16.06■□□□□ 0.16
VTI1A-209ENST00000496445 FAM102BQ5T8I3 360 aa16.06■□□□□ 0.16
VTI1A-209ENST00000496445 PPP4R3AQ6IN85 833 aa16.06■□□□□ 0.16
VTI1A-209ENST00000496445 FAM43BQ6ZT52 329 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms