RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 TPCN1Q9ULQ1 816 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 ST3GAL5Q9UNP4 418 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 SAMM50Q9Y512 469 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 PCDHGC5Q9Y5F6 944 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 GAS7O60861 476 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 STBD1O95210 358 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 LARGE1O95461 756 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 CTDNEP1O95476 244 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 MMP1P03956 469 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 OATP04181 439 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 ITGB1P05556 798 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 IRS1P35568 1242 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 LTBRP36941 435 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 SARSP49591 514 aaKnown RBP13.16□□□□□ -0.3
VTI1A-208ENST00000494728 USP11P51784 963 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 DLX2Q07687 328 aaPredicted RBP13.16□□□□□ -0.3
VTI1A-208ENST00000494728 DRP2Q13474 957 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 PTPROQ16827 1216 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 TRIM22Q8IYM9 498 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 METTL13Q8N6R0 699 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 OXER1Q8TDS5 423 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 TNPO1Q92973 898 aaKnown RBP13.16□□□□□ -0.3
VTI1A-208ENST00000494728 MBOAT7Q96N66 472 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 ADAM2Q99965 735 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 SH2D3AQ9BRG2 576 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 C11orf84Q9BUA3 381 aaPredicted RBP13.16□□□□□ -0.3
VTI1A-208ENST00000494728 ADAMTS10Q9H324 1103 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 EPHX3Q9H6B9 360 aa13.16□□□□□ -0.3
VTI1A-208ENST00000494728 CYP3A7-CYP3A51PA0A087WV96 503 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 FAM205CA6NFA0 338 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 C9IYK1 514 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 CPLX1O14810 134 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 LINC01565O15544 149 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 TBX10O75333 385 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 CYP3A7P24462 503 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 HYAL1Q12794 435 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 DSC3Q14574 896 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 INF2Q27J81 1249 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 Q4G0T1 1027 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 EARS2Q5JPH6 523 aaKnown RBP13.15□□□□□ -0.3
VTI1A-208ENST00000494728 FAM102BQ5T8I3 360 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 PTCRAQ6ISU1 281 aaPredicted RBP13.15□□□□□ -0.3
VTI1A-208ENST00000494728 ADGRD2Q7Z7M1 963 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 PABPC5Q96DU9 382 aaKnown RBP13.15□□□□□ -0.3
VTI1A-208ENST00000494728 CEP89Q96ST8 783 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 RIT2Q99578 217 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 TEKT3Q9BXF9 490 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 C11orf16Q9NQ32 467 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 RGS18Q9NS28 235 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 RNF19AQ9NV58 838 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 TCEAL9Q9UHQ7 104 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 PLAGL2Q9UPG8 496 aa13.15□□□□□ -0.3
VTI1A-208ENST00000494728 RB1P06400 928 aa13.14□□□□□ -0.31
VTI1A-208ENST00000494728 FGFR1P11362 822 aa13.14□□□□□ -0.31
VTI1A-208ENST00000494728 COL9A1P20849 921 aa13.14□□□□□ -0.31
VTI1A-208ENST00000494728 FGFR4P22455 802 aa13.14□□□□□ -0.31
VTI1A-208ENST00000494728 CRYBB1P53674 252 aaPredicted RBP13.14□□□□□ -0.31
VTI1A-208ENST00000494728 NLRP11P59045 1033 aaKnown RBP13.14□□□□□ -0.31
VTI1A-208ENST00000494728 TARBP2Q15633 366 aaKnown RBP13.14□□□□□ -0.31
VTI1A-208ENST00000494728 CTC1Q2NKJ3 1217 aa13.14□□□□□ -0.31
VTI1A-208ENST00000494728 EFCAB12Q6NXP0 572 aa13.14□□□□□ -0.31
VTI1A-208ENST00000494728 POTEHQ6S545 545 aa13.14□□□□□ -0.31
VTI1A-208ENST00000494728 FAM178BQ8IXR5 827 aa13.14□□□□□ -0.31
VTI1A-208ENST00000494728 KLHL23Q8NBE8 558 aa13.14□□□□□ -0.31
VTI1A-208ENST00000494728 PHF20Q9BVI0 1012 aa13.14□□□□□ -0.31
VTI1A-208ENST00000494728 CLDND1Q9NY35 253 aa13.14□□□□□ -0.31
VTI1A-208ENST00000494728 VAV3Q9UKW4 847 aa13.14□□□□□ -0.31
VTI1A-208ENST00000494728 AKT3Q9Y243 479 aa13.14□□□□□ -0.31
VTI1A-208ENST00000494728 RWDD3Q9Y3V2 267 aa13.14□□□□□ -0.31
VTI1A-208ENST00000494728 STK36Q9NRP7 1315 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 ZNF318Q5VUA4 2279 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 GRXCR2A6NFK2 248 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 EML1O00423 815 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 PFKFB2O60825 505 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 CSDE1O75534 798 aaKnown RBP13.13□□□□□ -0.31
VTI1A-208ENST00000494728 NEFLP07196 543 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 FDPSP14324 419 aaKnown RBP13.13□□□□□ -0.31
VTI1A-208ENST00000494728 GPC3P51654 580 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 JAK3P52333 1124 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 AK2P54819 239 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 ST3GAL1Q11201 340 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 CLUL1Q15846 466 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 EP400NLQ6ZTU2 488 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 MIER3Q7Z3K6 550 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 SPPL3Q8TCT6 385 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 P2RX5Q93086 422 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 FAM167AQ96KS9 214 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 PLVAPQ9BX97 442 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 LMAN2LQ9H0V9 348 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 WRAP73Q9P2S5 460 aaPredicted RBP13.13□□□□□ -0.31
VTI1A-208ENST00000494728 SEPT9Q9UHD8 586 aaPredicted RBP13.13□□□□□ -0.31
VTI1A-208ENST00000494728 CEP131Q9UPN4 1083 aa13.13□□□□□ -0.31
VTI1A-208ENST00000494728 DENND3A2RUS2 1198 aa13.12□□□□□ -0.31
VTI1A-208ENST00000494728 FAM86C2PA6NEL3 165 aa13.12□□□□□ -0.31
VTI1A-208ENST00000494728 TBKBP1A7MCY6 615 aa13.12□□□□□ -0.31
VTI1A-208ENST00000494728 STAG3L1P0CL83 205 aa13.12□□□□□ -0.31
VTI1A-208ENST00000494728 SFNP31947 248 aa13.12□□□□□ -0.31
VTI1A-208ENST00000494728 RBM10P98175 930 aaKnown RBP13.12□□□□□ -0.31
VTI1A-208ENST00000494728 NONOQ15233 471 aaKnown RBP eCLIP13.12□□□□□ -0.31
VTI1A-208ENST00000494728 LETM2Q2VYF4 491 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms