RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 MAP3K14Q99558 947 aa13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 PHF7Q9BWX1 381 aaPredicted RBP13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 JPH1Q9HDC5 661 aaPredicted RBP13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 KCNH7Q9NS40 1196 aa13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 TYW1Q9NV66 732 aaKnown RBP13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 RBM28Q9NW13 759 aaKnown RBP13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 SLC9A2Q9UBY0 812 aa13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 SEC63Q9UGP8 760 aaKnown RBP13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 LRFN2Q9ULH4 789 aa13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 PCDHA2Q9Y5H9 948 aa13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 MYO10Q9HD67 2058 aa13.33□□□□□ -0.27
CSNK1E-212ENST00000494610 HIDE1A8MVS5 230 aa13.33□□□□□ -0.28
CSNK1E-212ENST00000494610 H0Y858 1186 aa13.33□□□□□ -0.28
CSNK1E-212ENST00000494610 FGF18O76093 207 aa13.33□□□□□ -0.28
CSNK1E-212ENST00000494610 PTPN5P54829 565 aa13.33□□□□□ -0.28
CSNK1E-212ENST00000494610 KRT76Q01546 638 aa13.33□□□□□ -0.28
CSNK1E-212ENST00000494610 ME3Q16798 604 aa13.33□□□□□ -0.28
CSNK1E-212ENST00000494610 PLPP4Q5VZY2 271 aa13.33□□□□□ -0.28
CSNK1E-212ENST00000494610 TRMT1LQ7Z2T5 733 aaKnown RBP13.33□□□□□ -0.28
CSNK1E-212ENST00000494610 SUGP1Q8IWZ8 645 aaKnown RBP13.33□□□□□ -0.28
CSNK1E-212ENST00000494610 SUSD6Q92537 303 aa13.33□□□□□ -0.28
CSNK1E-212ENST00000494610 ADAM2Q99965 735 aa13.33□□□□□ -0.28
CSNK1E-212ENST00000494610 S1PR5Q9H228 398 aa13.33□□□□□ -0.28
CSNK1E-212ENST00000494610 ERVK-5Q9HDB9 667 aa13.33□□□□□ -0.28
CSNK1E-212ENST00000494610 TLR9Q9NR96 1032 aa13.33□□□□□ -0.28
CSNK1E-212ENST00000494610 TMEM260Q9NX78 707 aa13.33□□□□□ -0.28
CSNK1E-212ENST00000494610 DMXL1Q9Y485 3027 aa13.33□□□□□ -0.28
CSNK1E-212ENST00000494610 PTPRZ1P23471 2315 aaPredicted RBP13.33□□□□□ -0.28
CSNK1E-212ENST00000494610 PLXNA3P51805 1871 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 RRN3P2A6NIE6 340 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 ADAMTS3O15072 1205 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 CCNE2O96020 404 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 STAG3L1P0CL83 205 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 KLRC1P26715 233 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 PDIA3P30101 505 aaKnown RBP13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 SARSP49591 514 aaKnown RBP13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 GNAQP50148 359 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 STAT5BP51692 787 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 RTN1Q16799 776 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 DUSP6Q16828 381 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 NAALADL2Q58DX5 795 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 KANK3Q6NY19 840 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 SYCE2Q6PIF2 218 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 LRRC55Q6ZSA7 311 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 HEATR3Q7Z4Q2 680 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 MICU3Q86XE3 530 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 CCDC83Q8IWF9 413 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 KIAA0319LQ8IZA0 1049 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 COLGALT1Q8NBJ5 622 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 ZNF668Q96K58 619 aaPredicted RBP13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 MXRA8Q9BRK3 442 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 FTHL17Q9BXU8 183 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 AZI2Q9H6S1 392 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 CWH43Q9H720 699 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 ST3GAL5Q9UNP4 418 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 SMC3Q9UQE7 1217 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 PCDHB7Q9Y5E2 793 aa13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 RIF1Q5UIP0 2472 aaKnown RBP13.32□□□□□ -0.28
CSNK1E-212ENST00000494610 SMIM35A0A1B0GVV1 85 aa13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 SPDYE3A6NKU9 549 aa13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 M0QZ92 97 aa13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 FSCN2O14926 492 aa13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 GFRA3O60609 400 aa13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 WEE2P0C1S8 567 aa13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 ATP4AP20648 1035 aa13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 PDCP20941 246 aa13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 AVPR2P30518 371 aa13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 TECP42680 631 aa13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 SIGLEC14Q08ET2 396 aa13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 KIZQ2M2Z5 673 aa13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 WWC2Q6AWC2 1192 aa13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 THNSL1Q8IYQ7 743 aa13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 PPP2R3CQ969Q6 453 aa13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 CDHR1Q96JP9 859 aa13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 OSMRQ99650 979 aa13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 LZTS2Q9BRK4 669 aa13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 AGO4Q9HCK5 861 aaKnown RBP13.31□□□□□ -0.28
CSNK1E-212ENST00000494610 DNAH14Q0VDD8 3507 aa13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 ZBTB42B2RXF5 422 aa13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 C9IYK1 514 aa13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 RPS6KA5O75582 802 aa13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 VTNP04004 478 aa13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 SCRN1Q12765 414 aa13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 STK3Q13188 491 aa13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 KCNC3Q14003 757 aa13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 PTPN21Q16825 1174 aa13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 ANKRD54Q6NXT1 300 aa13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 FAM228AQ86W67 206 aa13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 CCDC60Q8IWA6 550 aaPredicted RBP13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 TRIM22Q8IYM9 498 aa13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 WASF1Q92558 559 aa13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 ATOH1Q92858 354 aaPredicted RBP13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 RGS18Q9NS28 235 aa13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 RNF19AQ9NV58 838 aa13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 BRPF3Q9ULD4 1205 aa13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 PCDHB12Q9Y5F1 795 aa13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 SQORQ9Y6N5 450 aa13.3□□□□□ -0.28
CSNK1E-212ENST00000494610 DENND3A2RUS2 1198 aa13.29□□□□□ -0.28
CSNK1E-212ENST00000494610 LARGE1O95461 756 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms