RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 ODR4Q5SWX8 454 aa14.82□□□□□ -0.04
ERCC3-209ENST00000494464 TRMT1LQ7Z2T5 733 aaKnown RBP14.82□□□□□ -0.04
ERCC3-209ENST00000494464 CCDC83Q8IWF9 413 aa14.82□□□□□ -0.04
ERCC3-209ENST00000494464 METTL13Q8N6R0 699 aa14.82□□□□□ -0.04
ERCC3-209ENST00000494464 TMEM40Q8WWA1 233 aa14.82□□□□□ -0.04
ERCC3-209ENST00000494464 HAS1Q92839 578 aa14.82□□□□□ -0.04
ERCC3-209ENST00000494464 NIFKQ9BYG3 293 aaKnown RBP14.82□□□□□ -0.04
ERCC3-209ENST00000494464 ERVK-5Q9HDB9 667 aa14.82□□□□□ -0.04
ERCC3-209ENST00000494464 SEPT9Q9UHD8 586 aaPredicted RBP14.82□□□□□ -0.04
ERCC3-209ENST00000494464 ADGRA3Q8IWK6 1321 aa14.81□□□□□ -0.04
ERCC3-209ENST00000494464 BTBD18B2RXH4 712 aa14.81□□□□□ -0.04
ERCC3-209ENST00000494464 DKC1O60832 514 aaKnown RBP eCLIP14.81□□□□□ -0.04
ERCC3-209ENST00000494464 GPR32O75388 356 aa14.81□□□□□ -0.04
ERCC3-209ENST00000494464 RPS6KA5O75582 802 aa14.81□□□□□ -0.04
ERCC3-209ENST00000494464 STBD1O95210 358 aa14.81□□□□□ -0.04
ERCC3-209ENST00000494464 VTNP04004 478 aa14.81□□□□□ -0.04
ERCC3-209ENST00000494464 CLCN3P51790 818 aa14.81□□□□□ -0.04
ERCC3-209ENST00000494464 CRYBB1P53674 252 aaPredicted RBP14.81□□□□□ -0.04
ERCC3-209ENST00000494464 PSMC5P62195 406 aa14.81□□□□□ -0.04
ERCC3-209ENST00000494464 TBC1D8BQ0IIM8 1120 aa14.81□□□□□ -0.04
ERCC3-209ENST00000494464 SLFN12Q8IYM2 578 aa14.81□□□□□ -0.04
ERCC3-209ENST00000494464 CRIPAKQ8N1N5 446 aa14.81□□□□□ -0.04
ERCC3-209ENST00000494464 TMX1Q9H3N1 280 aa14.81□□□□□ -0.04
ERCC3-209ENST00000494464 SUGCTQ9HAC7 445 aa14.81□□□□□ -0.04
ERCC3-209ENST00000494464 LMCD1Q9NZU5 365 aa14.81□□□□□ -0.04
ERCC3-209ENST00000494464 GINS2Q9Y248 185 aa14.81□□□□□ -0.04
ERCC3-209ENST00000494464 KIAA1671Q9BY89 1806 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 A0A0C4DFX4 3053 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 EML1O00423 815 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 SPIRE1Q08AE8 756 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 KIZQ2M2Z5 673 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 EFCAB12Q6NXP0 572 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 CLEC17AQ6ZS10 378 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 NPAS4Q8IUM7 802 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 LRRC71Q8N4P6 559 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 BANK1Q8NDB2 785 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 FBXO22Q8NEZ5 403 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 GDPD5Q8WTR4 605 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 ZNF689Q96CS4 500 aaPredicted RBP14.8□□□□□ -0.04
ERCC3-209ENST00000494464 CEP89Q96ST8 783 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 OSMRQ99650 979 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 C17orf80Q9BSJ5 609 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 CDHR5Q9HBB8 845 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 FOXD4L1Q9NU39 408 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 THEGQ9P2T0 379 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 MTUS1Q9ULD2 1270 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 AKT3Q9Y243 479 aa14.8□□□□□ -0.04
ERCC3-209ENST00000494464 NOC2LQ9Y3T9 749 aaKnown RBP14.8□□□□□ -0.04
ERCC3-209ENST00000494464 PRRC2BQ5JSZ5 2229 aaKnown RBP14.79□□□□□ -0.04
ERCC3-209ENST00000494464 IGKV6-21A0A0C4DH24 114 aa14.79□□□□□ -0.04
ERCC3-209ENST00000494464 GPR182O15218 404 aa14.79□□□□□ -0.04
ERCC3-209ENST00000494464 BAG4O95429 457 aaKnown RBP14.79□□□□□ -0.04
ERCC3-209ENST00000494464 P4HBP07237 508 aaKnown RBP14.79□□□□□ -0.04
ERCC3-209ENST00000494464 QARSP47897 775 aaKnown RBP14.79□□□□□ -0.04
ERCC3-209ENST00000494464 FOSBP53539 338 aa14.79□□□□□ -0.04
ERCC3-209ENST00000494464 SAFBQ15424 915 aaKnown RBP eCLIP14.79□□□□□ -0.04
ERCC3-209ENST00000494464 CCDC85BQ15834 202 aaPredicted RBP14.79□□□□□ -0.04
ERCC3-209ENST00000494464 TMEM266Q2M3C6 531 aa14.79□□□□□ -0.04
ERCC3-209ENST00000494464 MTERF2Q49AM1 385 aa14.79□□□□□ -0.04
ERCC3-209ENST00000494464 RTN4RL1Q86UN2 441 aaPredicted RBP14.79□□□□□ -0.04
ERCC3-209ENST00000494464 FAM228AQ86W67 206 aa14.79□□□□□ -0.04
ERCC3-209ENST00000494464 PPM1EQ8WY54 764 aa14.79□□□□□ -0.04
ERCC3-209ENST00000494464 C8orf76Q96K31 380 aa14.79□□□□□ -0.04
ERCC3-209ENST00000494464 RWDD3Q9Y3V2 267 aa14.79□□□□□ -0.04
ERCC3-209ENST00000494464 PPME1Q9Y570 386 aa14.79□□□□□ -0.04
ERCC3-209ENST00000494464 MARCH6O60337 910 aa14.78□□□□□ -0.04
ERCC3-209ENST00000494464 NEMFO60524 1076 aa14.78□□□□□ -0.04
ERCC3-209ENST00000494464 MAFO75444 373 aaPredicted RBP14.78□□□□□ -0.04
ERCC3-209ENST00000494464 DGKIO75912 1065 aa14.78□□□□□ -0.04
ERCC3-209ENST00000494464 LINC00271P0C7V0 271 aa14.78□□□□□ -0.04
ERCC3-209ENST00000494464 STAG3L1P0CL83 205 aa14.78□□□□□ -0.04
ERCC3-209ENST00000494464 GPC3P51654 580 aa14.78□□□□□ -0.04
ERCC3-209ENST00000494464 NLRP11P59045 1033 aaKnown RBP14.78□□□□□ -0.04
ERCC3-209ENST00000494464 NFX1Q12986 1120 aaKnown RBP14.78□□□□□ -0.04
ERCC3-209ENST00000494464 EPHA7Q15375 998 aa14.78□□□□□ -0.04
ERCC3-209ENST00000494464 EPC2Q52LR7 807 aa14.78□□□□□ -0.04
ERCC3-209ENST00000494464 ANO5Q75V66 913 aa14.78□□□□□ -0.04
ERCC3-209ENST00000494464 C4orf19Q8IY42 314 aa14.78□□□□□ -0.04
ERCC3-209ENST00000494464 MICALL1Q8N3F8 863 aa14.78□□□□□ -0.04
ERCC3-209ENST00000494464 FIBCD1Q8N539 461 aa14.78□□□□□ -0.04
ERCC3-209ENST00000494464 ATXN2LQ8WWM7 1075 aaKnown RBP14.78□□□□□ -0.04
ERCC3-209ENST00000494464 PPP1R16BQ96T49 567 aa14.78□□□□□ -0.04
ERCC3-209ENST00000494464 JPH2Q9BR39 696 aaPredicted RBP14.78□□□□□ -0.04
ERCC3-209ENST00000494464 ADAMTS10Q9H324 1103 aa14.78□□□□□ -0.04
ERCC3-209ENST00000494464 C1orf112Q9NSG2 853 aa14.78□□□□□ -0.04
ERCC3-209ENST00000494464 RNF216Q9NWF9 866 aaPredicted RBP14.78□□□□□ -0.04
ERCC3-209ENST00000494464 ST3GAL5Q9UNP4 418 aa14.78□□□□□ -0.04
ERCC3-209ENST00000494464 VCANP13611 3396 aa14.78□□□□□ -0.04
ERCC3-209ENST00000494464 FNDC1Q4ZHG4 1894 aaPredicted RBP14.77□□□□□ -0.04
ERCC3-209ENST00000494464 TMEM150BA6NC51 233 aa14.77□□□□□ -0.04
ERCC3-209ENST00000494464 DDX11L8A8MPP1 907 aa14.77□□□□□ -0.04
ERCC3-209ENST00000494464 C5orf67F2Z3F1 127 aa14.77□□□□□ -0.04
ERCC3-209ENST00000494464 WNT7AO00755 349 aa14.77□□□□□ -0.04
ERCC3-209ENST00000494464 MGEA5O60502 916 aa14.77□□□□□ -0.04
ERCC3-209ENST00000494464 EIF4BP23588 611 aaKnown RBP14.77□□□□□ -0.04
ERCC3-209ENST00000494464 MCM4P33991 863 aa14.77□□□□□ -0.04
ERCC3-209ENST00000494464 SARSP49591 514 aaKnown RBP14.77□□□□□ -0.04
ERCC3-209ENST00000494464 CDC42EP1Q00587 391 aa14.77□□□□□ -0.04
ERCC3-209ENST00000494464 ORC2Q13416 577 aaPredicted RBP14.77□□□□□ -0.04
ERCC3-209ENST00000494464 CALCRLQ16602 461 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms