RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 DPY19L2P1Q6NXN4 242 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 TAPT1Q6NXT6 567 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 MIS18BP1Q6P0N0 1132 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 C17orf99Q6UX52 265 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 OTUD6AQ7L8S5 288 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 PLPPR4Q7Z2D5 763 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 CCDC60Q8IWA6 550 aaPredicted RBP7.51□□□□□ -1.21
MSH5-217ENST00000494458 FAM114A1Q8IWE2 563 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 TRIM59Q8IWR1 403 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 SPC24Q8NBT2 197 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 CCDC150Q8NCX0 1101 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 ATP6V0A1Q93050 837 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 PARK7Q99497 189 aaKnown RBP7.51□□□□□ -1.21
MSH5-217ENST00000494458 MPHOSPH6Q99547 160 aaKnown RBP7.51□□□□□ -1.21
MSH5-217ENST00000494458 TUBGCP2Q9BSJ2 902 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 TTYH3Q9C0H2 523 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 DHX33Q9H6R0 707 aaKnown RBP7.51□□□□□ -1.21
MSH5-217ENST00000494458 EFCC1Q9HA90 598 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 CGNQ9P2M7 1197 aaKnown RBP7.51□□□□□ -1.21
MSH5-217ENST00000494458 TLL2Q9Y6L7 1015 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 ZNF236Q9UL36 1845 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 ZMYM2Q9UBW7 1377 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 IGKV6-21A0A0C4DH24 114 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 ARHGEF35A5YM69 484 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 SLC15A5A6NIM6 579 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 IGF2BP3O00425 579 aaKnown RBP eCLIP7.5□□□□□ -1.21
MSH5-217ENST00000494458 KIF3CO14782 793 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 BACH1O14867 736 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 MAPK13O15264 365 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 HIP1RO75146 1068 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 DGAT1O75907 488 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 ARIH2O95376 493 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 SNAI1O95863 264 aaPredicted RBP7.5□□□□□ -1.21
MSH5-217ENST00000494458 SSBP05455 408 aaKnown RBP eCLIP7.5□□□□□ -1.21
MSH5-217ENST00000494458 PGK2P07205 417 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 MYBP10242 640 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 PLS3P13797 630 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 ADORA2AP29274 412 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 MAPK4P31152 587 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 NCKAP1LP55160 1127 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 ENPEPQ07075 957 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 FILIP1LQ4L180 1135 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 SWSAP1Q6NVH7 229 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 CYFIP1Q7L576 1253 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 TMC6Q7Z403 805 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 FRMD5Q7Z6J6 570 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 ANKRD13CQ8N6S4 541 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 RETREG2Q8NC44 543 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 ZNF526Q8TF50 670 aaPredicted RBP7.5□□□□□ -1.21
MSH5-217ENST00000494458 SEPT1Q8WYJ6 367 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 IQCDQ96DY2 449 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 TRIM47Q96LD4 638 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 DRC1Q96MC2 740 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 ZNF830Q96NB3 372 aaPredicted RBP7.5□□□□□ -1.21
MSH5-217ENST00000494458 PANX2Q96RD6 677 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 GPR20Q99678 358 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 MKNK1Q9BUB5 465 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 ZNF408Q9H9D4 720 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 VTA1Q9NP79 307 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 XPNPEP1Q9NQW7 623 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 TYW1Q9NV66 732 aaKnown RBP7.5□□□□□ -1.21
MSH5-217ENST00000494458 LARSQ9P2J5 1176 aaKnown RBP7.5□□□□□ -1.21
MSH5-217ENST00000494458 GABBR1Q9UBS5 961 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 KCNG1Q9UIX4 513 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 PYCARDQ9ULZ3 195 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 SIK3Q9Y2K2 1263 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 KIAA1217Q5T5P2 1943 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 EMSYQ7Z589 1322 aa7.5□□□□□ -1.21
MSH5-217ENST00000494458 ZNFX1Q9P2E3 1918 aaKnown RBP7.49□□□□□ -1.21
MSH5-217ENST00000494458 A0A1W2PQJ5 194 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 ZBTB42B2RXF5 422 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 DDX39AO00148 427 aaKnown RBP7.49□□□□□ -1.21
MSH5-217ENST00000494458 N4BP3O15049 544 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 PMM2O15305 246 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 SLC16A3O15427 465 aaKnown RBP7.49□□□□□ -1.21
MSH5-217ENST00000494458 STX10O60499 249 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 TLR2O60603 784 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 TBCAO75347 108 aaKnown RBP7.49□□□□□ -1.21
MSH5-217ENST00000494458 FAM13AO94988 1023 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 GYPCP04921 128 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 KRT18P05783 430 aaKnown RBP7.49□□□□□ -1.21
MSH5-217ENST00000494458 PTMAP06454 111 aaKnown RBP7.49□□□□□ -1.21
MSH5-217ENST00000494458 NMT1P30419 496 aaKnown RBP7.49□□□□□ -1.21
MSH5-217ENST00000494458 HNRNPH3P31942 346 aaKnown RBP7.49□□□□□ -1.21
MSH5-217ENST00000494458 ARL2P36404 184 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 SLC26A2P50443 739 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 NPEPPSP55786 919 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 PPP2R3AQ06190 1150 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 KCNA1Q09470 495 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 LRMPQ12912 555 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 TRIM14Q14142 442 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 MAN2A1Q16706 1144 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 TPD52L1Q16890 204 aaPredicted RBP7.49□□□□□ -1.21
MSH5-217ENST00000494458 VWA3BQ502W6 1294 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 HSP90AA4PQ58FG1 418 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 SEPT14Q6ZU15 432 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 GPR142Q7Z601 462 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 DRC7Q8IY82 874 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 MYCT1Q8N699 235 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 TMEM161BQ8NDZ6 487 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms