RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 TPH2Q8IWU9 490 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 KIAA0319LQ8IZA0 1049 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 LRRC71Q8N4P6 559 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 LINC01465Q8N7H1 131 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 HERVK_113Q902F9 699 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 CDHR5Q9HBB8 845 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 CDY2AQ9Y6F7 541 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 NLRC5Q86WI3 1866 aa13.06□□□□□ -0.32
UBA3-211ENST00000493957 SMIM35A0A1B0GVV1 85 aa13.06□□□□□ -0.32
UBA3-211ENST00000493957 PP2D1A8MPX8 630 aa13.06□□□□□ -0.32
UBA3-211ENST00000493957 GRXCR1A8MXD5 290 aa13.06□□□□□ -0.32
UBA3-211ENST00000493957 STX6O43752 255 aa13.06□□□□□ -0.32
UBA3-211ENST00000493957 MED24O75448 989 aa13.06□□□□□ -0.32
UBA3-211ENST00000493957 VTNP04004 478 aa13.06□□□□□ -0.32
UBA3-211ENST00000493957 P4HBP07237 508 aaKnown RBP13.06□□□□□ -0.32
UBA3-211ENST00000493957 SPATA31C1P0DKV0 1188 aa13.06□□□□□ -0.32
UBA3-211ENST00000493957 GHRP10912 638 aa13.06□□□□□ -0.32
UBA3-211ENST00000493957 MRPS6P82932 125 aaKnown RBP13.06□□□□□ -0.32
UBA3-211ENST00000493957 PKP1Q13835 747 aa13.06□□□□□ -0.32
UBA3-211ENST00000493957 RILPL1Q5EBL4 403 aa13.06□□□□□ -0.32
UBA3-211ENST00000493957 FOXD4L5Q5VV16 416 aaPredicted RBP13.06□□□□□ -0.32
UBA3-211ENST00000493957 RPUSD2Q8IZ73 545 aaKnown RBP13.06□□□□□ -0.32
UBA3-211ENST00000493957 METTL13Q8N6R0 699 aa13.06□□□□□ -0.32
UBA3-211ENST00000493957 FOXD4L4Q8WXT5 416 aaPredicted RBP13.06□□□□□ -0.32
UBA3-211ENST00000493957 ZNF668Q96K58 619 aaPredicted RBP13.06□□□□□ -0.32
UBA3-211ENST00000493957 HSD17B14Q9BPX1 270 aa13.06□□□□□ -0.32
UBA3-211ENST00000493957 NIFKQ9BYG3 293 aaKnown RBP13.06□□□□□ -0.32
UBA3-211ENST00000493957 NRBP2Q9NSY0 501 aa13.06□□□□□ -0.32
UBA3-211ENST00000493957 SZT2Q5T011 3432 aa13.06□□□□□ -0.32
UBA3-211ENST00000493957 TTC3P53804 2025 aa13.06□□□□□ -0.32
UBA3-211ENST00000493957 KIAA1671Q9BY89 1806 aa13.05□□□□□ -0.32
UBA3-211ENST00000493957 ZBBXA8MT70 800 aa13.05□□□□□ -0.32
UBA3-211ENST00000493957 CAND2O75155 1236 aa13.05□□□□□ -0.32
UBA3-211ENST00000493957 HSP90AA1P07900 732 aaKnown RBP13.05□□□□□ -0.32
UBA3-211ENST00000493957 ATP2C1P98194 919 aaPredicted RBP13.05□□□□□ -0.32
UBA3-211ENST00000493957 LPIN1Q14693 890 aa13.05□□□□□ -0.32
UBA3-211ENST00000493957 ECM1Q16610 540 aa13.05□□□□□ -0.32
UBA3-211ENST00000493957 LRIT3Q3SXY7 679 aa13.05□□□□□ -0.32
UBA3-211ENST00000493957 EFCAB12Q6NXP0 572 aa13.05□□□□□ -0.32
UBA3-211ENST00000493957 BRAPQ7Z569 592 aa13.05□□□□□ -0.32
UBA3-211ENST00000493957 TMCO2Q7Z6W1 182 aaPredicted RBP13.05□□□□□ -0.32
UBA3-211ENST00000493957 C4orf19Q8IY42 314 aa13.05□□□□□ -0.32
UBA3-211ENST00000493957 DBF4BQ8NFT6 615 aa13.05□□□□□ -0.32
UBA3-211ENST00000493957 TMEM40Q8WWA1 233 aa13.05□□□□□ -0.32
UBA3-211ENST00000493957 TNPO1Q92973 898 aaKnown RBP13.05□□□□□ -0.32
UBA3-211ENST00000493957 AGO3Q9H9G7 860 aaKnown RBP13.05□□□□□ -0.32
UBA3-211ENST00000493957 CYP26B1Q9NR63 512 aa13.05□□□□□ -0.32
UBA3-211ENST00000493957 PFKMP08237 780 aa13.04□□□□□ -0.32
UBA3-211ENST00000493957 CDC25AP30304 524 aa13.04□□□□□ -0.32
UBA3-211ENST00000493957 YWHABP31946 246 aaKnown RBP13.04□□□□□ -0.32
UBA3-211ENST00000493957 DEFB103AP81534 67 aa13.04□□□□□ -0.32
UBA3-211ENST00000493957 GRIN1Q05586 938 aa13.04□□□□□ -0.32
UBA3-211ENST00000493957 TBC1D8BQ0IIM8 1120 aa13.04□□□□□ -0.32
UBA3-211ENST00000493957 KIZQ2M2Z5 673 aa13.04□□□□□ -0.32
UBA3-211ENST00000493957 PLEKHG4Q58EX7 1191 aa13.04□□□□□ -0.32
UBA3-211ENST00000493957 FBXO47Q5MNV8 452 aa13.04□□□□□ -0.32
UBA3-211ENST00000493957 CNKSR3Q6P9H4 555 aa13.04□□□□□ -0.32
UBA3-211ENST00000493957 RSPH3Q86UC2 560 aa13.04□□□□□ -0.32
UBA3-211ENST00000493957 CATSPER3Q86XQ3 398 aa13.04□□□□□ -0.32
UBA3-211ENST00000493957 PIGOQ8TEQ8 1089 aa13.04□□□□□ -0.32
UBA3-211ENST00000493957 ZSWIM4Q9H7M6 989 aa13.04□□□□□ -0.32
UBA3-211ENST00000493957 SUGCTQ9HAC7 445 aa13.04□□□□□ -0.32
UBA3-211ENST00000493957 CEP131Q9UPN4 1083 aa13.04□□□□□ -0.32
UBA3-211ENST00000493957 GINS2Q9Y248 185 aa13.04□□□□□ -0.32
UBA3-211ENST00000493957 TRPV2Q9Y5S1 764 aa13.04□□□□□ -0.32
UBA3-211ENST00000493957 CLIC4Q9Y696 253 aa13.04□□□□□ -0.32
UBA3-211ENST00000493957 FNDC1Q4ZHG4 1894 aaPredicted RBP13.04□□□□□ -0.32
UBA3-211ENST00000493957 IGKV6-21A0A0C4DH24 114 aa13.03□□□□□ -0.32
UBA3-211ENST00000493957 MAGEB2O15479 319 aa13.03□□□□□ -0.32
UBA3-211ENST00000493957 GPR32O75388 356 aa13.03□□□□□ -0.32
UBA3-211ENST00000493957 CD52P31358 61 aa13.03□□□□□ -0.32
UBA3-211ENST00000493957 PBX2P40425 430 aa13.03□□□□□ -0.32
UBA3-211ENST00000493957 RABGGTBP53611 331 aa13.03□□□□□ -0.32
UBA3-211ENST00000493957 WDR5P61964 334 aaKnown RBP13.03□□□□□ -0.32
UBA3-211ENST00000493957 SF3A1Q15459 793 aaKnown RBP13.03□□□□□ -0.32
UBA3-211ENST00000493957 TMEM266Q2M3C6 531 aa13.03□□□□□ -0.32
UBA3-211ENST00000493957 XKR9Q5GH70 373 aa13.03□□□□□ -0.32
UBA3-211ENST00000493957 GPR153Q6NV75 609 aa13.03□□□□□ -0.32
UBA3-211ENST00000493957 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.03□□□□□ -0.32
UBA3-211ENST00000493957 IGSF22Q8N9C0 903 aa13.03□□□□□ -0.32
UBA3-211ENST00000493957 NEK9Q8TD19 979 aa13.03□□□□□ -0.32
UBA3-211ENST00000493957 CEP170P1Q96L14 293 aa13.03□□□□□ -0.32
UBA3-211ENST00000493957 OSMRQ99650 979 aa13.03□□□□□ -0.32
UBA3-211ENST00000493957 MMTAG2Q9BU76 263 aaKnown RBP13.03□□□□□ -0.32
UBA3-211ENST00000493957 CELF4Q9BZC1 486 aaKnown RBP13.03□□□□□ -0.32
UBA3-211ENST00000493957 LRWD1Q9UFC0 647 aa13.03□□□□□ -0.32
UBA3-211ENST00000493957 AKT3Q9Y243 479 aa13.03□□□□□ -0.32
UBA3-211ENST00000493957 CHD9Q3L8U1 2897 aa13.03□□□□□ -0.32
UBA3-211ENST00000493957 COL4A6Q14031 1691 aa13.02□□□□□ -0.32
UBA3-211ENST00000493957 VWA3AA6NCI4 1184 aa13.02□□□□□ -0.33
UBA3-211ENST00000493957 LAD1O00515 517 aa13.02□□□□□ -0.33
UBA3-211ENST00000493957 MAFO75444 373 aaPredicted RBP13.02□□□□□ -0.33
UBA3-211ENST00000493957 LYPLA2O95372 231 aa13.02□□□□□ -0.33
UBA3-211ENST00000493957 PARNO95453 639 aaKnown RBP13.02□□□□□ -0.33
UBA3-211ENST00000493957 ACTN1P12814 892 aa13.02□□□□□ -0.33
UBA3-211ENST00000493957 PRPHP41219 470 aa13.02□□□□□ -0.33
UBA3-211ENST00000493957 RARRES1P49788 294 aa13.02□□□□□ -0.33
UBA3-211ENST00000493957 CEBPZQ03701 1054 aaKnown RBP13.02□□□□□ -0.33
UBA3-211ENST00000493957 PTPAQ15257 358 aa13.02□□□□□ -0.33
UBA3-211ENST00000493957 IER5Q5VY09 327 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms