RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 CCDC65Q8IXS2 484 aa16.56■□□□□ 0.24
ACTB-213ENST00000493945 FMR1NBQ8N0W7 255 aaPredicted RBP16.56■□□□□ 0.24
ACTB-213ENST00000493945 METTL13Q8N6R0 699 aa16.56■□□□□ 0.24
ACTB-213ENST00000493945 PSPC1Q8WXF1 523 aaKnown RBP16.56■□□□□ 0.24
ACTB-213ENST00000493945 IFT74Q96LB3 600 aa16.56■□□□□ 0.24
ACTB-213ENST00000493945 HTATIP2Q9BUP3 242 aa16.56■□□□□ 0.24
ACTB-213ENST00000493945 GOLPH3LQ9H4A5 285 aa16.56■□□□□ 0.24
ACTB-213ENST00000493945 C17orf75Q9HAS0 396 aa16.56■□□□□ 0.24
ACTB-213ENST00000493945 DACT1Q9NYF0 836 aa16.56■□□□□ 0.24
ACTB-213ENST00000493945 H0YCG3 227 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 FAM13AO94988 1023 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 CYP2C9P11712 490 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 CYP11B2P19099 503 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 SLC12A3P55017 1021 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 NPEPPSP55786 919 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 IRX5P78411 483 aaPredicted RBP16.55■□□□□ 0.24
ACTB-213ENST00000493945 TFDP1Q14186 410 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 MXD4Q14582 209 aaPredicted RBP16.55■□□□□ 0.24
ACTB-213ENST00000493945 TARBP2Q15633 366 aaKnown RBP16.55■□□□□ 0.24
ACTB-213ENST00000493945 ECM1Q16610 540 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 PTGISQ16647 500 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 IER5Q5VY09 327 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 MTHFD1LQ6UB35 978 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 STXBP4Q6ZWJ1 553 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 NME8Q8N427 588 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 PAWRQ96IZ0 340 aaKnown RBP16.55■□□□□ 0.24
ACTB-213ENST00000493945 NUP62CLQ9H1M0 184 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 DHX33Q9H6R0 707 aaKnown RBP16.55■□□□□ 0.24
ACTB-213ENST00000493945 BLOC1S4Q9NUP1 217 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 SETD4Q9NVD3 440 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 KBTBD4Q9NVX7 518 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 RMND1Q9NWS8 449 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 LARSQ9P2J5 1176 aaKnown RBP16.55■□□□□ 0.24
ACTB-213ENST00000493945 SERTAD1Q9UHV2 236 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 PCDHA2Q9Y5H9 948 aa16.55■□□□□ 0.24
ACTB-213ENST00000493945 A0A087X0B3 334 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 SMIM35A0A1B0GVV1 85 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 MBLAC1A4D2B0 266 aaPredicted RBP16.54■□□□□ 0.24
ACTB-213ENST00000493945 CCDC85CA6NKD9 419 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 ASAP2O43150 1006 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 ACTN4O43707 911 aaKnown RBP16.54■□□□□ 0.24
ACTB-213ENST00000493945 GTPBP6O43824 516 aaPredicted RBP16.54■□□□□ 0.24
ACTB-213ENST00000493945 NR1I2O75469 434 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 C22orf31O95567 290 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 COL6A1P12109 1028 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 GAP43P17677 238 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 KLRC1P26715 233 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 ASIC1P78348 528 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 PTK7Q13308 1070 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 DMP1Q13316 513 aaPredicted RBP16.54■□□□□ 0.24
ACTB-213ENST00000493945 BFSP2Q13515 415 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 POSTNQ15063 836 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 NAALADL2Q58DX5 795 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 FAM102BQ5T8I3 360 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 RINT1Q6NUQ1 792 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 SLC39A5Q6ZMH5 540 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 KCNK18Q7Z418 384 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 SLC43A3Q8NBI5 491 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 ENGASEQ8NFI3 743 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 CAGE1Q8TC20 777 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 SCLT1Q96NL6 688 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 TOX2Q96NM4 488 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 SUGCTQ9HAC7 445 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 SEL1LQ9UBV2 794 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 AKT3Q9Y243 479 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 COL4A3BPQ9Y5P4 624 aa16.54■□□□□ 0.24
ACTB-213ENST00000493945 EVPLQ92817 2033 aa16.53■□□□□ 0.24
ACTB-213ENST00000493945 CENPFP49454 3210 aa16.53■□□□□ 0.24
ACTB-213ENST00000493945 STBD1O95210 358 aa16.53■□□□□ 0.24
ACTB-213ENST00000493945 LIG1P18858 919 aa16.53■□□□□ 0.24
ACTB-213ENST00000493945 HOXC8P31273 242 aa16.53■□□□□ 0.24
ACTB-213ENST00000493945 AFMP43652 599 aa16.53■□□□□ 0.24
ACTB-213ENST00000493945 SMTNP53814 917 aa16.53■□□□□ 0.24
ACTB-213ENST00000493945 RTP1P59025 263 aa16.53■□□□□ 0.24
ACTB-213ENST00000493945 SNW1Q13573 536 aaKnown RBP16.53■□□□□ 0.24
ACTB-213ENST00000493945 LONRF3Q496Y0 759 aa16.53■□□□□ 0.24
ACTB-213ENST00000493945 EFCAB12Q6NXP0 572 aa16.53■□□□□ 0.24
ACTB-213ENST00000493945 DDX12PQ92771 950 aa16.53■□□□□ 0.24
ACTB-213ENST00000493945 PARVGQ9HBI0 331 aa16.53■□□□□ 0.24
ACTB-213ENST00000493945 TRIP12Q14669 1992 aaPredicted RBP16.52■□□□□ 0.24
ACTB-213ENST00000493945 PQBP1O60828 265 aaKnown RBP16.52■□□□□ 0.24
ACTB-213ENST00000493945 KIF20AO95235 890 aa16.52■□□□□ 0.24
ACTB-213ENST00000493945 IDEP14735 1019 aa16.52■□□□□ 0.24
ACTB-213ENST00000493945 SNX17Q15036 470 aa16.52■□□□□ 0.24
ACTB-213ENST00000493945 KLHL40Q2TBA0 621 aa16.52■□□□□ 0.24
ACTB-213ENST00000493945 ODR4Q5SWX8 454 aa16.52■□□□□ 0.24
ACTB-213ENST00000493945 CNNM4Q6P4Q7 775 aa16.52■□□□□ 0.24
ACTB-213ENST00000493945 C1orf186Q6ZWK4 172 aa16.52■□□□□ 0.24
ACTB-213ENST00000493945 ANKRD33Q7Z3H0 272 aa16.52■□□□□ 0.24
ACTB-213ENST00000493945 SMARCE1Q969G3 411 aa16.52■□□□□ 0.24
ACTB-213ENST00000493945 PAGE5Q96GU1 130 aa16.52■□□□□ 0.24
ACTB-213ENST00000493945 C7orf25Q9BPX7 421 aa16.52■□□□□ 0.24
ACTB-213ENST00000493945 TRIM9Q9C026 710 aa16.52■□□□□ 0.24
ACTB-213ENST00000493945 C2orf40Q9H1Z8 148 aa16.52■□□□□ 0.24
ACTB-213ENST00000493945 ZHX3Q9H4I2 956 aa16.52■□□□□ 0.24
ACTB-213ENST00000493945 EXOC1Q9NV70 894 aa16.52■□□□□ 0.24
ACTB-213ENST00000493945 PRKAG2Q9UGJ0 569 aa16.52■□□□□ 0.24
ACTB-213ENST00000493945 IGKV6-21A0A0C4DH24 114 aa16.51■□□□□ 0.23
ACTB-213ENST00000493945 PVALEFA0A1B0GWK0 134 aa16.51■□□□□ 0.23
ACTB-213ENST00000493945 TMEM150BA6NC51 233 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms