RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 MIER3Q7Z3K6 550 aa16.53■□□□□ 0.24
ATG4B-223ENST00000493618 DAGLBQ8NCG7 672 aa16.53■□□□□ 0.24
ATG4B-223ENST00000493618 SLKQ9H2G2 1235 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-223ENST00000493618 CEP131Q9UPN4 1083 aa16.53■□□□□ 0.24
ATG4B-223ENST00000493618 PCDHB7Q9Y5E2 793 aa16.53■□□□□ 0.24
ATG4B-223ENST00000493618 ARID2Q68CP9 1835 aa16.53■□□□□ 0.24
ATG4B-223ENST00000493618 PSMD10O75832 226 aa16.52■□□□□ 0.24
ATG4B-223ENST00000493618 IL9P15248 144 aa16.52■□□□□ 0.24
ATG4B-223ENST00000493618 COL9A1P20849 921 aa16.52■□□□□ 0.24
ATG4B-223ENST00000493618 SFNP31947 248 aa16.52■□□□□ 0.24
ATG4B-223ENST00000493618 JAK3P52333 1124 aa16.52■□□□□ 0.24
ATG4B-223ENST00000493618 NLRP11P59045 1033 aaKnown RBP16.52■□□□□ 0.24
ATG4B-223ENST00000493618 NONOQ15233 471 aaKnown RBP eCLIP16.52■□□□□ 0.242e-6■■■□□ 14.8
ATG4B-223ENST00000493618 SH2D3AQ9BRG2 576 aa16.52■□□□□ 0.24
ATG4B-223ENST00000493618 C22orf23Q9BZE7 217 aa16.52■□□□□ 0.24
ATG4B-223ENST00000493618 IGFLR1Q9H665 355 aa16.52■□□□□ 0.24
ATG4B-223ENST00000493618 RGS18Q9NS28 235 aa16.52■□□□□ 0.24
ATG4B-223ENST00000493618 NRBP2Q9NSY0 501 aa16.52■□□□□ 0.24
ATG4B-223ENST00000493618 CLDND1Q9NY35 253 aa16.52■□□□□ 0.24
ATG4B-223ENST00000493618 HCSTQ9UBK5 93 aa16.52■□□□□ 0.24
ATG4B-223ENST00000493618 SEPT9Q9UHD8 586 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-223ENST00000493618 CYP3A7-CYP3A51PA0A087WV96 503 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 TBKBP1A7MCY6 615 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 GPR182O15218 404 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 MAGEB2O15479 319 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 SLC37A4O43826 429 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 PFKFB2O60825 505 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 CYP3A7P24462 503 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 DNAJB1P25685 340 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 GTF2F1P35269 517 aaKnown RBP eCLIP16.51■□□□□ 0.232e-8■■■■■ 34.1
ATG4B-223ENST00000493618 AK2P54819 239 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 LETM2Q2VYF4 491 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 MTERF2Q49AM1 385 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 SPOUT1Q5T280 376 aaKnown RBP16.51■□□□□ 0.23
ATG4B-223ENST00000493618 FAM102BQ5T8I3 360 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 PTCRAQ6ISU1 281 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-223ENST00000493618 KRT25Q7Z3Z0 450 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 LINC01465Q8N7H1 131 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 KLHL23Q8NBE8 558 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 ETNPPLQ8TBG4 499 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 PABPC5Q96DU9 382 aaKnown RBP16.51■□□□□ 0.23
ATG4B-223ENST00000493618 MAP7D2Q96T17 732 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 PHF20Q9BVI0 1012 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 LMAN2LQ9H0V9 348 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 CD320Q9NPF0 282 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 DDX25Q9UHL0 483 aaKnown RBP16.51■□□□□ 0.23
ATG4B-223ENST00000493618 RAPGEFL1Q9UHV5 662 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 PLAGL2Q9UPG8 496 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 BDP1A6H8Y1 2624 aa16.51■□□□□ 0.23
ATG4B-223ENST00000493618 C9IYK1 514 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 CDKL5O76039 1030 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 CTDNEP1O95476 244 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 MMP1P03956 469 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 ITGB1P05556 798 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 FGFR4P22455 802 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 TMOD1P28289 359 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 HYAL1Q12794 435 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 CLUL1Q15846 466 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 ODR4Q5SWX8 454 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 GALNT17Q6IS24 598 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 NECAB1Q8N987 351 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 NEK9Q8TD19 979 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 OXER1Q8TDS5 423 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 KHSRPQ92945 711 aaKnown RBP eCLIP16.5■□□□□ 0.233e-7■■□□□ 12.3
ATG4B-223ENST00000493618 MBOAT7Q96N66 472 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 SCLT1Q96NL6 688 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 PLVAPQ9BX97 442 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 ADAMTS10Q9H324 1103 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 EPHX3Q9H6B9 360 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 C1orf112Q9NSG2 853 aa16.5■□□□□ 0.23
ATG4B-223ENST00000493618 STK36Q9NRP7 1315 aa16.49■□□□□ 0.23
ATG4B-223ENST00000493618 CCDC194A0A1B0GVG4 234 aa16.49■□□□□ 0.23
ATG4B-223ENST00000493618 LINC01565O15544 149 aa16.49■□□□□ 0.23
ATG4B-223ENST00000493618 LARGE1O95461 756 aa16.49■□□□□ 0.23
ATG4B-223ENST00000493618 FGFR1P11362 822 aa16.49■□□□□ 0.23
ATG4B-223ENST00000493618 TBC1D8BQ0IIM8 1120 aa16.49■□□□□ 0.23
ATG4B-223ENST00000493618 DRP2Q13474 957 aa16.49■□□□□ 0.23
ATG4B-223ENST00000493618 CAMK1Q14012 370 aa16.49■□□□□ 0.23
ATG4B-223ENST00000493618 DSC3Q14574 896 aa16.49■□□□□ 0.23
ATG4B-223ENST00000493618 SLC24A5Q71RS6 500 aa16.49■□□□□ 0.23
ATG4B-223ENST00000493618 SPPL3Q8TCT6 385 aa16.49■□□□□ 0.23
ATG4B-223ENST00000493618 PCDHGC5Q9Y5F6 944 aa16.49■□□□□ 0.23
ATG4B-223ENST00000493618 C5orf42Q9H799 3197 aa16.49■□□□□ 0.23
ATG4B-223ENST00000493618 FAM205CA6NFA0 338 aa16.48■□□□□ 0.23
ATG4B-223ENST00000493618 GRXCR2A6NFK2 248 aa16.48■□□□□ 0.23
ATG4B-223ENST00000493618 DDX11L8A8MPP1 907 aa16.48■□□□□ 0.23
ATG4B-223ENST00000493618 EML1O00423 815 aa16.48■□□□□ 0.23
ATG4B-223ENST00000493618 CSDE1O75534 798 aaKnown RBP16.48■□□□□ 0.23
ATG4B-223ENST00000493618 STBD1O95210 358 aa16.48■□□□□ 0.23
ATG4B-223ENST00000493618 IRS1P35568 1242 aa16.48■□□□□ 0.23
ATG4B-223ENST00000493618 LTBRP36941 435 aa16.48■□□□□ 0.23
ATG4B-223ENST00000493618 GPC3P51654 580 aa16.48■□□□□ 0.23
ATG4B-223ENST00000493618 FOSBP53539 338 aa16.48■□□□□ 0.23
ATG4B-223ENST00000493618 DLX2Q07687 328 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-223ENST00000493618 TARBP2Q15633 366 aaKnown RBP16.48■□□□□ 0.23
ATG4B-223ENST00000493618 MOXD1Q6UVY6 613 aa16.48■□□□□ 0.23
ATG4B-223ENST00000493618 B3GNT9Q6UX72 402 aa16.48■□□□□ 0.23
ATG4B-223ENST00000493618 PIK3AP1Q6ZUJ8 805 aa16.48■□□□□ 0.23
ATG4B-223ENST00000493618 ADGRD2Q7Z7M1 963 aa16.48■□□□□ 0.23
ATG4B-223ENST00000493618 RDM1Q8NG50 284 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms