RNA–Protein interactions for RNA: ENST00000493511.1

GTF3C2-212, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-212ENST00000493511 PPME1Q9Y570 386 aa20.2■□□□□ 0.82
GTF3C2-212ENST00000493511 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.2■□□□□ 0.82
GTF3C2-212ENST00000493511 LCHNA4D1U4 455 aa20.19■□□□□ 0.82
GTF3C2-212ENST00000493511 RBAK-RBAKDNI3L0D1 243 aa20.19■□□□□ 0.82
GTF3C2-212ENST00000493511 WNT7AO00755 349 aa20.19■□□□□ 0.82
GTF3C2-212ENST00000493511 ENPP3O14638 875 aa20.19■□□□□ 0.82
GTF3C2-212ENST00000493511 UPP2O95045 317 aa20.19■□□□□ 0.82
GTF3C2-212ENST00000493511 STBD1O95210 358 aa20.19■□□□□ 0.82
GTF3C2-212ENST00000493511 U2AF2P26368 475 aaKnown RBP eCLIP20.19■□□□□ 0.823e-13■■■□□ 17.2
GTF3C2-212ENST00000493511 TXKP42681 527 aa20.19■□□□□ 0.82
GTF3C2-212ENST00000493511 HTRA4P83105 476 aaPredicted RBP20.19■□□□□ 0.82
GTF3C2-212ENST00000493511 CDC42EP1Q00587 391 aa20.19■□□□□ 0.82
GTF3C2-212ENST00000493511 ANO5Q75V66 913 aa20.19■□□□□ 0.82
GTF3C2-212ENST00000493511 EXOC8Q8IYI6 725 aa20.19■□□□□ 0.82
GTF3C2-212ENST00000493511 MAFAQ8NHW3 353 aaPredicted RBP20.19■□□□□ 0.82
GTF3C2-212ENST00000493511 YME1L1Q96TA2 773 aa20.19■□□□□ 0.82
GTF3C2-212ENST00000493511 LOXHD1Q8IVV2 1947 aa20.18■□□□□ 0.82
GTF3C2-212ENST00000493511 TMEM150BA6NC51 233 aa20.18■□□□□ 0.82
GTF3C2-212ENST00000493511 GPR182O15218 404 aa20.18■□□□□ 0.82
GTF3C2-212ENST00000493511 GPR32O75388 356 aa20.18■□□□□ 0.82
GTF3C2-212ENST00000493511 NFX1Q12986 1120 aaKnown RBP20.18■□□□□ 0.82
GTF3C2-212ENST00000493511 OTUD6AQ7L8S5 288 aa20.18■□□□□ 0.82
GTF3C2-212ENST00000493511 C4orf19Q8IY42 314 aa20.18■□□□□ 0.82
GTF3C2-212ENST00000493511 NEK9Q8TD19 979 aa20.18■□□□□ 0.82
GTF3C2-212ENST00000493511 PPP1R16BQ96T49 567 aa20.18■□□□□ 0.82
GTF3C2-212ENST00000493511 OSMRQ99650 979 aa20.18■□□□□ 0.82
GTF3C2-212ENST00000493511 CDHR5Q9HBB8 845 aa20.18■□□□□ 0.82
GTF3C2-212ENST00000493511 CYP26B1Q9NR63 512 aa20.18■□□□□ 0.82
GTF3C2-212ENST00000493511 RGL1Q9NZL6 768 aa20.18■□□□□ 0.82
GTF3C2-212ENST00000493511 SMC3Q9UQE7 1217 aa20.18■□□□□ 0.82
GTF3C2-212ENST00000493511 MAFO75444 373 aaPredicted RBP20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 GJB2P29033 226 aa20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 YWHABP31946 246 aaKnown RBP20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 NLRP11P59045 1033 aaKnown RBP20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 CYP4A11Q02928 519 aa20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 TMEM266Q2M3C6 531 aa20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 TTC38Q5R3I4 469 aa20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 TPH2Q8IWU9 490 aa20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 TMEM40Q8WWA1 233 aa20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 SLC7A3Q8WY07 619 aa20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 ARNTL2Q8WYA1 636 aa20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 DYDC2Q96IM9 177 aa20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 CEP170P1Q96L14 293 aa20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 SCLT1Q96NL6 688 aa20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 TGS1Q96RS0 853 aaKnown RBP20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 CEP89Q96ST8 783 aa20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 EIF2AK1Q9BQI3 630 aaKnown RBP20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 SH2D3AQ9BRG2 576 aa20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 TSPYL2Q9H2G4 693 aaPredicted RBP20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 NOC2LQ9Y3T9 749 aaKnown RBP20.17■□□□□ 0.82
GTF3C2-212ENST00000493511 TTC3P53804 2025 aa20.16■□□□□ 0.82
GTF3C2-212ENST00000493511 IGKV6-21A0A0C4DH24 114 aa20.16■□□□□ 0.82
GTF3C2-212ENST00000493511 LINC01553A4QN01 128 aa20.16■□□□□ 0.82
GTF3C2-212ENST00000493511 H3BQV1 296 aa20.16■□□□□ 0.82
GTF3C2-212ENST00000493511 ARHGEF15O94989 841 aa20.16■□□□□ 0.82
GTF3C2-212ENST00000493511 OR52Z1P0C646 297 aa20.16■□□□□ 0.82
GTF3C2-212ENST00000493511 ZNF174Q15697 407 aa20.16■□□□□ 0.82
GTF3C2-212ENST00000493511 PLA2G4FQ68DD2 849 aa20.16■□□□□ 0.82
GTF3C2-212ENST00000493511 SP7Q8TDD2 431 aaPredicted RBP20.16■□□□□ 0.82
GTF3C2-212ENST00000493511 HSD17B14Q9BPX1 270 aa20.16■□□□□ 0.82
GTF3C2-212ENST00000493511 TMEM60Q9H2L4 133 aa20.16■□□□□ 0.82
GTF3C2-212ENST00000493511 ADAMTS10Q9H324 1103 aa20.16■□□□□ 0.82
GTF3C2-212ENST00000493511 CERS4Q9HA82 394 aa20.16■□□□□ 0.82
GTF3C2-212ENST00000493511 ERVK-5Q9HDB9 667 aa20.16■□□□□ 0.82
GTF3C2-212ENST00000493511 WRAP73Q9P2S5 460 aaPredicted RBP20.16■□□□□ 0.82
GTF3C2-212ENST00000493511 ST3GAL5Q9UNP4 418 aa20.16■□□□□ 0.82
GTF3C2-212ENST00000493511 DENND3A2RUS2 1198 aa20.15■□□□□ 0.82
GTF3C2-212ENST00000493511 SLITRK3O94933 977 aa20.15■□□□□ 0.82
GTF3C2-212ENST00000493511 IGFBP4P22692 258 aa20.15■□□□□ 0.82
GTF3C2-212ENST00000493511 EIF4BP23588 611 aaKnown RBP20.15■□□□□ 0.82
GTF3C2-212ENST00000493511 RFC5P40937 340 aa20.15■□□□□ 0.82
GTF3C2-212ENST00000493511 GPC3P51654 580 aa20.15■□□□□ 0.82
GTF3C2-212ENST00000493511 POLGP54098 1239 aaPredicted RBP20.15■□□□□ 0.82
GTF3C2-212ENST00000493511 CTTNQ14247 550 aaKnown RBP20.15■□□□□ 0.82
GTF3C2-212ENST00000493511 MCTP1Q6DN14 999 aa20.15■□□□□ 0.82
GTF3C2-212ENST00000493511 NLRP7Q8WX94 980 aa20.15■□□□□ 0.82
GTF3C2-212ENST00000493511 LINC01599Q8WXQ3 324 aa20.15■□□□□ 0.82
GTF3C2-212ENST00000493511 RNF216Q9NWF9 866 aaPredicted RBP20.15■□□□□ 0.82
GTF3C2-212ENST00000493511 REV3LO60673 3130 aa20.14■□□□□ 0.82
GTF3C2-212ENST00000493511 CUL9Q8IWT3 2517 aa20.14■□□□□ 0.82
GTF3C2-212ENST00000493511 LYPLA2O95372 231 aa20.14■□□□□ 0.81
GTF3C2-212ENST00000493511 STAG3L1P0CL83 205 aa20.14■□□□□ 0.81
GTF3C2-212ENST00000493511 NPEPPSP55786 919 aa20.14■□□□□ 0.81
GTF3C2-212ENST00000493511 ERVK-21P61565 698 aa20.14■□□□□ 0.81
GTF3C2-212ENST00000493511 ADGRE1Q14246 886 aa20.14■□□□□ 0.81
GTF3C2-212ENST00000493511 TMX1Q9H3N1 280 aa20.14■□□□□ 0.81
GTF3C2-212ENST00000493511 SUCLA2Q9P2R7 463 aaPredicted RBP20.14■□□□□ 0.81
GTF3C2-212ENST00000493511 POTEMA6NI47 508 aa20.13■□□□□ 0.81
GTF3C2-212ENST00000493511 GTPBP6O43824 516 aaPredicted RBP20.13■□□□□ 0.81
GTF3C2-212ENST00000493511 GAS2O43903 313 aaKnown RBP20.13■□□□□ 0.81
GTF3C2-212ENST00000493511 DRP2Q13474 957 aa20.13■□□□□ 0.81
GTF3C2-212ENST00000493511 XKR9Q5GH70 373 aa20.13■□□□□ 0.81
GTF3C2-212ENST00000493511 RTN4RL1Q86UN2 441 aaPredicted RBP20.13■□□□□ 0.81
GTF3C2-212ENST00000493511 FAM228AQ86W67 206 aa20.13■□□□□ 0.81
GTF3C2-212ENST00000493511 NPAS4Q8IUM7 802 aa20.13■□□□□ 0.81
GTF3C2-212ENST00000493511 SLC17A8Q8NDX2 589 aa20.13■□□□□ 0.81
GTF3C2-212ENST00000493511 ERMNQ8TAM6 284 aa20.13■□□□□ 0.81
GTF3C2-212ENST00000493511 CCDC43Q96MW1 224 aaKnown RBP20.13■□□□□ 0.81
GTF3C2-212ENST00000493511 SAMD11Q96NU1 681 aa20.13■□□□□ 0.81
GTF3C2-212ENST00000493511 GCOM2Q9BZD3 368 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms