RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 EFCAB14O75071 495 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 MPIG6BO95866 241 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 MMEP08473 750 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 MRE11P49959 708 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 TGFB2P61812 414 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 ABHD18Q0P651 414 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 DUSP8Q13202 625 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 FHL2Q14192 279 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 PCOLCEQ15113 449 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 SEC23AQ15436 765 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 KANK2Q63ZY3 851 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 LRSAM1Q6UWE0 723 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 FILIP1Q7Z7B0 1213 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 RTKN2Q8IZC4 609 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 CISD2Q8N5K1 135 aaKnown RBP4.91□□□□□ -1.62
PTCD3-218ENST00000493430 CFHR4Q92496 578 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 TANGO6Q9C0B7 1094 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 NELFAQ9H3P2 528 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 KCNH7Q9NS40 1196 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 PPRC1Q5VV67 1664 aaKnown RBP4.9□□□□□ -1.62
PTCD3-218ENST00000493430 LRRIQ1Q96JM4 1722 aa4.9□□□□□ -1.62
PTCD3-218ENST00000493430 OVOL3O00110 214 aa4.9□□□□□ -1.63
PTCD3-218ENST00000493430 HHEXQ03014 270 aa4.9□□□□□ -1.63
PTCD3-218ENST00000493430 PTH1RQ03431 593 aa4.9□□□□□ -1.63
PTCD3-218ENST00000493430 FOXL1Q12952 345 aa4.9□□□□□ -1.63
PTCD3-218ENST00000493430 MOGSQ13724 837 aa4.9□□□□□ -1.63
PTCD3-218ENST00000493430 LSM12Q3MHD2 195 aaKnown RBP4.9□□□□□ -1.63
PTCD3-218ENST00000493430 TMEM200BQ69YZ2 307 aa4.9□□□□□ -1.63
PTCD3-218ENST00000493430 LRP10Q7Z4F1 713 aa4.9□□□□□ -1.63
PTCD3-218ENST00000493430 HIPK4Q8NE63 616 aa4.9□□□□□ -1.63
PTCD3-218ENST00000493430 ASB15Q8WXK1 588 aa4.9□□□□□ -1.63
PTCD3-218ENST00000493430 MAGEB10Q96LZ2 347 aaPredicted RBP4.9□□□□□ -1.63
PTCD3-218ENST00000493430 GBP4Q96PP9 640 aa4.9□□□□□ -1.63
PTCD3-218ENST00000493430 HIRIP3Q9BW71 556 aaPredicted RBP4.9□□□□□ -1.63
PTCD3-218ENST00000493430 SLC52A2Q9HAB3 445 aa4.9□□□□□ -1.63
PTCD3-218ENST00000493430 PLA2G3Q9NZ20 509 aa4.9□□□□□ -1.63
PTCD3-218ENST00000493430 NDOR1Q9UHB4 597 aa4.9□□□□□ -1.63
PTCD3-218ENST00000493430 ERICH3Q5RHP9 1530 aa4.89□□□□□ -1.63
PTCD3-218ENST00000493430 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-218ENST00000493430 PRAMEF22A3QJZ6 481 aa4.89□□□□□ -1.63
PTCD3-218ENST00000493430 FOXP2O15409 715 aa4.89□□□□□ -1.63
PTCD3-218ENST00000493430 ZNF202O95125 648 aa4.89□□□□□ -1.63
PTCD3-218ENST00000493430 ACRV1P26436 265 aa4.89□□□□□ -1.63
PTCD3-218ENST00000493430 HIBADHP31937 336 aaKnown RBP4.89□□□□□ -1.63
PTCD3-218ENST00000493430 MCM7P33993 719 aa4.89□□□□□ -1.63
PTCD3-218ENST00000493430 MSX2P35548 267 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-218ENST00000493430 GRM7Q14831 915 aa4.89□□□□□ -1.63
PTCD3-218ENST00000493430 GRAMD4Q6IC98 578 aa4.89□□□□□ -1.63
PTCD3-218ENST00000493430 CYB5RLQ6IPT4 315 aa4.89□□□□□ -1.63
PTCD3-218ENST00000493430 NOSTRINQ8IVI9 506 aa4.89□□□□□ -1.63
PTCD3-218ENST00000493430 ZNF808Q8N4W9 903 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-218ENST00000493430 PLEKHG4BQ96PX9 1271 aa4.89□□□□□ -1.63
PTCD3-218ENST00000493430 CELF4Q9BZC1 486 aaKnown RBP4.89□□□□□ -1.63
PTCD3-218ENST00000493430 FAM184BQ9ULE4 1060 aa4.89□□□□□ -1.63
PTCD3-218ENST00000493430 COQ6Q9Y2Z9 468 aa4.89□□□□□ -1.63
PTCD3-218ENST00000493430 ASB1Q9Y576 335 aa4.89□□□□□ -1.63
PTCD3-218ENST00000493430 PMS2P1A4D2B8 440 aa4.88□□□□□ -1.63
PTCD3-218ENST00000493430 GOLGA6L22H0YM25 854 aa4.88□□□□□ -1.63
PTCD3-218ENST00000493430 NARSO43776 548 aaKnown RBP4.88□□□□□ -1.63
PTCD3-218ENST00000493430 GTF2F1P35269 517 aaKnown RBP eCLIP4.88□□□□□ -1.63
PTCD3-218ENST00000493430 DGCR2P98153 550 aa4.88□□□□□ -1.63
PTCD3-218ENST00000493430 TMEM132BQ14DG7 1078 aa4.88□□□□□ -1.63
PTCD3-218ENST00000493430 CRB2Q5IJ48 1285 aa4.88□□□□□ -1.63
PTCD3-218ENST00000493430 IGFL4Q6B9Z1 124 aa4.88□□□□□ -1.63
PTCD3-218ENST00000493430 ADGRE4PQ86SQ3 457 aa4.88□□□□□ -1.63
PTCD3-218ENST00000493430 SGMS1Q86VZ5 419 aa4.88□□□□□ -1.63
PTCD3-218ENST00000493430 GPR135Q8IZ08 494 aa4.88□□□□□ -1.63
PTCD3-218ENST00000493430 GSTCDQ8NEC7 633 aa4.88□□□□□ -1.63
PTCD3-218ENST00000493430 OR14K1Q8NGZ2 314 aa4.88□□□□□ -1.63
PTCD3-218ENST00000493430 IL17DQ8TAD2 202 aa4.88□□□□□ -1.63
PTCD3-218ENST00000493430 CALML6Q8TD86 181 aa4.88□□□□□ -1.63
PTCD3-218ENST00000493430 AURKAIP1Q9NWT8 199 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-218ENST00000493430 B3GALT1Q9Y5Z6 326 aa4.88□□□□□ -1.63
PTCD3-218ENST00000493430 SLC12A8A0AV02 714 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 SLC26A4O43511 780 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 HIP1RO75146 1068 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 RASGRP1O95267 797 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 NPTXRO95502 500 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 C1SP09871 688 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 APEX1P27695 318 aaKnown RBP4.87□□□□□ -1.63
PTCD3-218ENST00000493430 SDHAP31040 664 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 STAT5BP51692 787 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 HGFACQ04756 655 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 MAP3K12Q12852 859 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 TM4SF20Q53R12 229 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 TRIM61Q5EBN2 209 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 KRTAP5-3Q6L8H2 238 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 OVCH1Q7RTY7 1134 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 THEMISQ8N1K5 641 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-218ENST00000493430 SLC7A14Q8TBB6 771 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 DLG3Q92796 817 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 DEPDC7Q96QD5 511 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 TLR9Q9NR96 1032 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 NUP160Q12769 1436 aa4.87□□□□□ -1.63
PTCD3-218ENST00000493430 ZCCHC11Q5TAX3 1644 aaKnown RBP4.86□□□□□ -1.63
PTCD3-218ENST00000493430 CCDC163A0A0D9SF12 145 aa4.86□□□□□ -1.63
PTCD3-218ENST00000493430 FAM221BA6H8Z2 402 aa4.86□□□□□ -1.63
PTCD3-218ENST00000493430 RASSF10A6NK89 507 aa4.86□□□□□ -1.63
PTCD3-218ENST00000493430 SERINC3Q13530 473 aa4.86□□□□□ -1.63
PTCD3-218ENST00000493430 RASA3Q14644 834 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms