RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 SMCO2A6NFE2 343 aa24.4■■□□□ 1.5
PFDN4-205ENST00000493356 FAM86B1E9PN63 330 aa24.4■■□□□ 1.5
PFDN4-205ENST00000493356 DHX15O43143 795 aaKnown RBP24.4■■□□□ 1.5
PFDN4-205ENST00000493356 C22orf31O95567 290 aa24.4■■□□□ 1.5
PFDN4-205ENST00000493356 FAM86B2P0C5J1 330 aa24.4■■□□□ 1.5
PFDN4-205ENST00000493356 LAG3P18627 525 aa24.4■■□□□ 1.5
PFDN4-205ENST00000493356 APOBRQ0VD83 1088 aa24.4■■□□□ 1.5
PFDN4-205ENST00000493356 PLPP4Q5VZY2 271 aa24.4■■□□□ 1.5
PFDN4-205ENST00000493356 SWSAP1Q6NVH7 229 aa24.4■■□□□ 1.5
PFDN4-205ENST00000493356 ASIC4Q96FT7 647 aa24.4■■□□□ 1.5
PFDN4-205ENST00000493356 ESYT1Q9BSJ8 1104 aa24.4■■□□□ 1.5
PFDN4-205ENST00000493356 S1PR5Q9H228 398 aa24.4■■□□□ 1.5
PFDN4-205ENST00000493356 ELAC1Q9H777 363 aaKnown RBP24.4■■□□□ 1.5
PFDN4-205ENST00000493356 V9GY48 417 aaPredicted RBP24.4■■□□□ 1.5
PFDN4-205ENST00000493356 hCG_1984214I3L0E3 225 aa24.39■■□□□ 1.49
PFDN4-205ENST00000493356 SRGAP2BP0DMP2 458 aa24.39■■□□□ 1.49
PFDN4-205ENST00000493356 PLCB3Q01970 1234 aa24.39■■□□□ 1.49
PFDN4-205ENST00000493356 DSC3Q14574 896 aa24.39■■□□□ 1.49
PFDN4-205ENST00000493356 PTPN21Q16825 1174 aa24.39■■□□□ 1.49
PFDN4-205ENST00000493356 MIS18BP1Q6P0N0 1132 aa24.39■■□□□ 1.49
PFDN4-205ENST00000493356 PLA2G4DQ86XP0 818 aa24.39■■□□□ 1.49
PFDN4-205ENST00000493356 ZNF713Q8N859 430 aaPredicted RBP24.39■■□□□ 1.49
PFDN4-205ENST00000493356 RASGRP4Q8TDF6 673 aa24.39■■□□□ 1.49
PFDN4-205ENST00000493356 MRPS27Q92552 414 aaKnown RBP24.39■■□□□ 1.49
PFDN4-205ENST00000493356 BARHL2Q9NY43 387 aa24.39■■□□□ 1.49
PFDN4-205ENST00000493356 IGLV3-22A0A075B6J6 115 aa24.38■■□□□ 1.49
PFDN4-205ENST00000493356 IPO5O00410 1097 aaKnown RBP24.38■■□□□ 1.49
PFDN4-205ENST00000493356 GPR32O75388 356 aa24.38■■□□□ 1.49
PFDN4-205ENST00000493356 VTNP04004 478 aa24.38■■□□□ 1.49
PFDN4-205ENST00000493356 TECP42680 631 aa24.38■■□□□ 1.49
PFDN4-205ENST00000493356 VCPP55072 806 aaKnown RBP24.38■■□□□ 1.49
PFDN4-205ENST00000493356 RTN1Q16799 776 aa24.38■■□□□ 1.49
PFDN4-205ENST00000493356 ANKRD54Q6NXT1 300 aa24.38■■□□□ 1.49
PFDN4-205ENST00000493356 SYCE2Q6PIF2 218 aa24.38■■□□□ 1.49
PFDN4-205ENST00000493356 TCF25Q9BQ70 676 aa24.38■■□□□ 1.49
PFDN4-205ENST00000493356 TMEM117Q9H0C3 514 aa24.38■■□□□ 1.49
PFDN4-205ENST00000493356 GLT8D2Q9H1C3 349 aa24.38■■□□□ 1.49
PFDN4-205ENST00000493356 ZFHX2Q9C0A1 2572 aaPredicted RBP24.37■■□□□ 1.49
PFDN4-205ENST00000493356 LRRC55Q6ZSA7 311 aa24.37■■□□□ 1.49
PFDN4-205ENST00000493356 CKAP2LQ8IYA6 745 aa24.37■■□□□ 1.49
PFDN4-205ENST00000493356 METTL13Q8N6R0 699 aa24.37■■□□□ 1.49
PFDN4-205ENST00000493356 CRYGNQ8WXF5 182 aa24.37■■□□□ 1.49
PFDN4-205ENST00000493356 BBXQ8WY36 941 aaPredicted RBP24.37■■□□□ 1.49
PFDN4-205ENST00000493356 ANO2Q9NQ90 1003 aa24.37■■□□□ 1.49
PFDN4-205ENST00000493356 ENTPD7Q9NQZ7 604 aa24.37■■□□□ 1.49
PFDN4-205ENST00000493356 RNF19AQ9NV58 838 aa24.37■■□□□ 1.49
PFDN4-205ENST00000493356 PUF60Q9UHX1 559 aaKnown RBP24.37■■□□□ 1.49
PFDN4-205ENST00000493356 BRPF3Q9ULD4 1205 aa24.37■■□□□ 1.49
PFDN4-205ENST00000493356 MAFBQ9Y5Q3 323 aaPredicted RBP24.37■■□□□ 1.49
PFDN4-205ENST00000493356 HIDE1A8MVS5 230 aa24.36■■□□□ 1.49
PFDN4-205ENST00000493356 ZBTB43O43298 467 aa24.36■■□□□ 1.49
PFDN4-205ENST00000493356 LLGL2Q6P1M3 1020 aa24.36■■□□□ 1.49
PFDN4-205ENST00000493356 CASD1Q96PB1 797 aa24.36■■□□□ 1.49
PFDN4-205ENST00000493356 APOL5Q9BWW9 433 aa24.36■■□□□ 1.49
PFDN4-205ENST00000493356 NGRNQ9NPE2 291 aaKnown RBP24.36■■□□□ 1.49
PFDN4-205ENST00000493356 CYP3A4P08684 503 aa24.35■■□□□ 1.49
PFDN4-205ENST00000493356 JAKMIP3Q5VZ66 844 aa24.35■■□□□ 1.49
PFDN4-205ENST00000493356 KCNT2Q6UVM3 1135 aa24.35■■□□□ 1.49
PFDN4-205ENST00000493356 TRMT1LQ7Z2T5 733 aaKnown RBP24.35■■□□□ 1.49
PFDN4-205ENST00000493356 TCEANC2Q96MN5 208 aa24.35■■□□□ 1.49
PFDN4-205ENST00000493356 ZNF577Q9BSK1 485 aa24.35■■□□□ 1.49
PFDN4-205ENST00000493356 WDR81Q562E7 1941 aa24.35■■□□□ 1.49
PFDN4-205ENST00000493356 CFAP54Q96N23 3096 aa24.35■■□□□ 1.49
PFDN4-205ENST00000493356 HOXA2O43364 376 aa24.34■■□□□ 1.49
PFDN4-205ENST00000493356 ST18O60284 1047 aa24.34■■□□□ 1.49
PFDN4-205ENST00000493356 HOXB8P17481 243 aaPredicted RBP24.34■■□□□ 1.49
PFDN4-205ENST00000493356 AVPR2P30518 371 aa24.34■■□□□ 1.49
PFDN4-205ENST00000493356 PBX3P40426 434 aa24.34■■□□□ 1.49
PFDN4-205ENST00000493356 EXOSC10Q01780 885 aaKnown RBP24.34■■□□□ 1.49
PFDN4-205ENST00000493356 ZNF746Q6NUN9 644 aaPredicted RBP24.34■■□□□ 1.49
PFDN4-205ENST00000493356 LRRC43Q8N309 656 aa24.34■■□□□ 1.49
PFDN4-205ENST00000493356 ZNF558Q96NG5 402 aa24.34■■□□□ 1.49
PFDN4-205ENST00000493356 FAM217BQ9NTX9 383 aaPredicted RBP24.34■■□□□ 1.49
PFDN4-205ENST00000493356 TBC1D22BQ9NU19 505 aa24.34■■□□□ 1.49
PFDN4-205ENST00000493356 FAM86C1Q9NVL1 165 aa24.34■■□□□ 1.49
PFDN4-205ENST00000493356 SP100P23497 879 aaPredicted RBP24.33■■□□□ 1.49
PFDN4-205ENST00000493356 PPM1AP35813 382 aa24.33■■□□□ 1.49
PFDN4-205ENST00000493356 CLCN3P51790 818 aa24.33■■□□□ 1.49
PFDN4-205ENST00000493356 SMAP1Q8IYB5 467 aaPredicted RBP24.33■■□□□ 1.49
PFDN4-205ENST00000493356 CEP131Q9UPN4 1083 aa24.33■■□□□ 1.49
PFDN4-205ENST00000493356 GOLGA8AA7E2F4 631 aa24.32■■□□□ 1.48
PFDN4-205ENST00000493356 GOLGA8BA8MQT2 603 aa24.32■■□□□ 1.48
PFDN4-205ENST00000493356 MAGEB2O15479 319 aa24.32■■□□□ 1.48
PFDN4-205ENST00000493356 CDC27P30260 824 aa24.32■■□□□ 1.48
PFDN4-205ENST00000493356 NLRP11P59045 1033 aaKnown RBP24.32■■□□□ 1.48
PFDN4-205ENST00000493356 SETQ01105 290 aaPredicted RBP24.32■■□□□ 1.48
PFDN4-205ENST00000493356 KRT17Q04695 432 aa24.32■■□□□ 1.48
PFDN4-205ENST00000493356 RNF20Q5VTR2 975 aa24.32■■□□□ 1.48
PFDN4-205ENST00000493356 TMC7Q7Z402 723 aa24.32■■□□□ 1.48
PFDN4-205ENST00000493356 ZBTB33Q86T24 672 aa24.32■■□□□ 1.48
PFDN4-205ENST00000493356 ECHDC2Q86YB7 292 aa24.32■■□□□ 1.48
PFDN4-205ENST00000493356 ABI1Q8IZP0 508 aa24.32■■□□□ 1.48
PFDN4-205ENST00000493356 LINC01465Q8N7H1 131 aa24.32■■□□□ 1.48
PFDN4-205ENST00000493356 ADAMTS10Q9H324 1103 aa24.32■■□□□ 1.48
PFDN4-205ENST00000493356 SPG21Q9NZD8 308 aa24.32■■□□□ 1.48
PFDN4-205ENST00000493356 GABBR1Q9UBS5 961 aa24.32■■□□□ 1.48
PFDN4-205ENST00000493356 CDH22Q9UJ99 828 aa24.32■■□□□ 1.48
PFDN4-205ENST00000493356 AKT3Q9Y243 479 aa24.32■■□□□ 1.48
PFDN4-205ENST00000493356 PCDHA10Q9Y5I2 948 aa24.32■■□□□ 1.48
PFDN4-205ENST00000493356 ADAMTS3O15072 1205 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms