RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 DRC1Q96MC2 740 aa15.45■□□□□ 0.06
PTPN7-216ENST00000492977 ARMCX3Q9UH62 379 aaPredicted RBP15.45■□□□□ 0.06
PTPN7-216ENST00000492977 PPP1R37O75864 691 aa15.44■□□□□ 0.06
PTPN7-216ENST00000492977 EPB41P11171 864 aaKnown RBP15.44■□□□□ 0.06
PTPN7-216ENST00000492977 PLS3P13797 630 aa15.44■□□□□ 0.06
PTPN7-216ENST00000492977 EDNRBP24530 442 aa15.44■□□□□ 0.06
PTPN7-216ENST00000492977 HNRNPH3P31942 346 aaKnown RBP15.44■□□□□ 0.06
PTPN7-216ENST00000492977 KCNA1Q09470 495 aa15.44■□□□□ 0.06
PTPN7-216ENST00000492977 SNAPC2Q13487 334 aa15.44■□□□□ 0.06
PTPN7-216ENST00000492977 ZC2HC1CQ53FD0 456 aaPredicted RBP15.44■□□□□ 0.06
PTPN7-216ENST00000492977 XKR9Q5GH70 373 aa15.44■□□□□ 0.06
PTPN7-216ENST00000492977 WDR59Q6PJI9 974 aa15.44■□□□□ 0.06
PTPN7-216ENST00000492977 HS2ST1Q7LGA3 356 aa15.44■□□□□ 0.06
PTPN7-216ENST00000492977 NEK11Q8NG66 645 aa15.44■□□□□ 0.06
PTPN7-216ENST00000492977 DESI2Q9BSY9 194 aa15.44■□□□□ 0.06
PTPN7-216ENST00000492977 PAGR1Q9BTK6 254 aa15.44■□□□□ 0.06
PTPN7-216ENST00000492977 GBP3Q9H0R5 595 aa15.44■□□□□ 0.06
PTPN7-216ENST00000492977 MMRN2Q9H8L6 949 aa15.44■□□□□ 0.06
PTPN7-216ENST00000492977 WDR81Q562E7 1941 aa15.44■□□□□ 0.06
PTPN7-216ENST00000492977 ZMYM2Q9UBW7 1377 aa15.43■□□□□ 0.06
PTPN7-216ENST00000492977 PHLPP2Q6ZVD8 1323 aa15.43■□□□□ 0.06
PTPN7-216ENST00000492977 BACH1O14867 736 aa15.43■□□□□ 0.06
PTPN7-216ENST00000492977 USO1O60763 962 aaKnown RBP15.43■□□□□ 0.06
PTPN7-216ENST00000492977 ERCC3P19447 782 aa15.43■□□□□ 0.06
PTPN7-216ENST00000492977 KCNMA1Q12791 1236 aa15.43■□□□□ 0.06
PTPN7-216ENST00000492977 KCNH2Q12809 1159 aa15.43■□□□□ 0.06
PTPN7-216ENST00000492977 MYBPC2Q14324 1141 aa15.43■□□□□ 0.06
PTPN7-216ENST00000492977 GPAT2Q6NUI2 795 aa15.43■□□□□ 0.06
PTPN7-216ENST00000492977 MIS18BP1Q6P0N0 1132 aa15.43■□□□□ 0.06
PTPN7-216ENST00000492977 ABHD15Q6UXT9 468 aa15.43■□□□□ 0.06
PTPN7-216ENST00000492977 SYT10Q6XYQ8 523 aa15.43■□□□□ 0.06
PTPN7-216ENST00000492977 FAM133AQ8N9E0 248 aa15.43■□□□□ 0.06
PTPN7-216ENST00000492977 GTF3C2Q8WUA4 911 aaPredicted RBP15.43■□□□□ 0.06
PTPN7-216ENST00000492977 MPHOSPH6Q99547 160 aaKnown RBP15.43■□□□□ 0.06
PTPN7-216ENST00000492977 CHP1Q99653 195 aa15.43■□□□□ 0.06
PTPN7-216ENST00000492977 MKNK1Q9BUB5 465 aa15.43■□□□□ 0.06
PTPN7-216ENST00000492977 ST6GALNAC4Q9H4F1 302 aa15.43■□□□□ 0.06
PTPN7-216ENST00000492977 RBPJLQ9UBG7 517 aa15.43■□□□□ 0.06
PTPN7-216ENST00000492977 GABBR1Q9UBS5 961 aa15.43■□□□□ 0.06
PTPN7-216ENST00000492977 EPN1Q9Y6I3 576 aaPredicted RBP15.43■□□□□ 0.06
PTPN7-216ENST00000492977 UTRNP46939 3433 aa15.43■□□□□ 0.06
PTPN7-216ENST00000492977 DYNC1I1O14576 645 aa15.42■□□□□ 0.06
PTPN7-216ENST00000492977 PEX10O60683 326 aa15.42■□□□□ 0.06
PTPN7-216ENST00000492977 AKAP3O75969 853 aa15.42■□□□□ 0.06
PTPN7-216ENST00000492977 ACTR2P61160 394 aa15.42■□□□□ 0.06
PTPN7-216ENST00000492977 UTP14CQ5TAP6 766 aaKnown RBP15.42■□□□□ 0.06
PTPN7-216ENST00000492977 SWSAP1Q6NVH7 229 aa15.42■□□□□ 0.06
PTPN7-216ENST00000492977 ANO5Q75V66 913 aa15.42■□□□□ 0.06
PTPN7-216ENST00000492977 CCDC170Q8IYT3 715 aa15.42■□□□□ 0.06
PTPN7-216ENST00000492977 TMEM174Q8WUU8 243 aa15.42■□□□□ 0.06
PTPN7-216ENST00000492977 NUCKS1Q9H1E3 243 aaKnown RBP15.42■□□□□ 0.06
PTPN7-216ENST00000492977 TMEM206Q9H813 350 aa15.42■□□□□ 0.06
PTPN7-216ENST00000492977 FAM207AQ9NSI2 230 aaPredicted RBP15.42■□□□□ 0.06
PTPN7-216ENST00000492977 DMAC2Q9NW81 257 aa15.42■□□□□ 0.06
PTPN7-216ENST00000492977 CGNQ9P2M7 1197 aaKnown RBP15.42■□□□□ 0.06
PTPN7-216ENST00000492977 PLAGL2Q9UPG8 496 aa15.42■□□□□ 0.06
PTPN7-216ENST00000492977 SOWAHBA6NEL2 793 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 K7ENM7 598 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 CLIC2O15247 247 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 ZNF862O60290 1169 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 STBD1O95210 358 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 NDUFA10O95299 355 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 ATG7O95352 703 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 SUPT20HL2P0C7V6 817 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 TGFB3P10600 412 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 XRCC5P13010 732 aaKnown RBP15.41■□□□□ 0.06
PTPN7-216ENST00000492977 PSMC2P35998 433 aaKnown RBP15.41■□□□□ 0.06
PTPN7-216ENST00000492977 GJA5P36382 358 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 SNRPFP62306 86 aaKnown RBP15.41■□□□□ 0.06
PTPN7-216ENST00000492977 MAEAQ7L5Y9 396 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 SLC9A9Q8IVB4 645 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 SMCR8Q8TEV9 937 aaPredicted RBP15.41■□□□□ 0.06
PTPN7-216ENST00000492977 ACCSQ96QU6 501 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 MROH8Q9H579 483 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 TXNRD2Q9NNW7 524 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 AGPAT3Q9NRZ7 376 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 PNMA3Q9UL41 463 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 AFPP02771 609 aaKnown RBP15.41■□□□□ 0.06
PTPN7-216ENST00000492977 CYLC1P35663 651 aaPredicted RBP15.41■□□□□ 0.06
PTPN7-216ENST00000492977 NPEPPSP55786 919 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 FKBP1BP68106 108 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 GTF2BQ00403 316 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 SP2Q02086 613 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 PLA2G4FQ68DD2 849 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 SYCP3Q8IZU3 236 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 BORCS6Q96GS4 357 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 C17orf75Q9HAS0 396 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 CEP72Q9P209 647 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 DNAI1Q9UI46 699 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 FRMD4BQ9Y2L6 1034 aa15.41■□□□□ 0.06
PTPN7-216ENST00000492977 TMEM150BA6NC51 233 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 EPHB6O15197 1021 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 CASP4P49662 377 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 SMTNP53814 917 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 NCKAP1LP55160 1127 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 KRT83P78385 493 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 FSTL1Q12841 308 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 NEDD9Q14511 834 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 Q3C1V9 767 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 XKR3Q5GH77 459 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms