RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 TDRD10Q5VZ19 366 aaKnown RBP8.22□□□□□ -1.09
TPR-208ENST00000492973 APOBEC3HQ6NTF7 200 aaKnown RBP8.22□□□□□ -1.09
TPR-208ENST00000492973 HHIPL2Q6UWX4 724 aa8.22□□□□□ -1.09
TPR-208ENST00000492973 ADGRA1Q86SQ6 560 aa8.22□□□□□ -1.09
TPR-208ENST00000492973 PNMA8AQ86V59 439 aaPredicted RBP8.22□□□□□ -1.09
TPR-208ENST00000492973 DZIP1Q86YF9 867 aaKnown RBP8.22□□□□□ -1.09
TPR-208ENST00000492973 MCF2L2Q86YR7 1114 aa8.22□□□□□ -1.09
TPR-208ENST00000492973 CREG2Q8IUH2 290 aa8.22□□□□□ -1.09
TPR-208ENST00000492973 DAGLBQ8NCG7 672 aa8.22□□□□□ -1.09
TPR-208ENST00000492973 TEKT1Q969V4 418 aa8.22□□□□□ -1.09
TPR-208ENST00000492973 ANAPC16Q96DE5 110 aa8.22□□□□□ -1.09
TPR-208ENST00000492973 ZDHHC15Q96MV8 337 aa8.22□□□□□ -1.09
TPR-208ENST00000492973 ASCC2Q9H1I8 757 aaPredicted RBP8.22□□□□□ -1.09
TPR-208ENST00000492973 MAST3O60307 1309 aa8.22□□□□□ -1.09
TPR-208ENST00000492973 SIGLEC6O43699 453 aa8.21□□□□□ -1.1
TPR-208ENST00000492973 IGSF3O75054 1194 aa8.21□□□□□ -1.1
TPR-208ENST00000492973 IDH1O75874 414 aaKnown RBP8.21□□□□□ -1.1
TPR-208ENST00000492973 PDE6AP16499 860 aa8.21□□□□□ -1.1
TPR-208ENST00000492973 TTF1Q15361 905 aaPredicted RBP8.21□□□□□ -1.1
TPR-208ENST00000492973 CLEC16AQ2KHT3 1053 aa8.21□□□□□ -1.1
TPR-208ENST00000492973 AXDND1Q5T1B0 1012 aaPredicted RBP8.21□□□□□ -1.1
TPR-208ENST00000492973 NAA16Q6N069 864 aaPredicted RBP8.21□□□□□ -1.1
TPR-208ENST00000492973 LDHDQ86WU2 507 aa8.21□□□□□ -1.1
TPR-208ENST00000492973 C7orf61Q8IZ16 206 aa8.21□□□□□ -1.1
TPR-208ENST00000492973 KBTBD3Q8NAB2 608 aa8.21□□□□□ -1.1
TPR-208ENST00000492973 LRRN4CLQ8ND94 238 aa8.21□□□□□ -1.1
TPR-208ENST00000492973 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.21□□□□□ -1.15e-12■■□□□ 11.5
TPR-208ENST00000492973 TDRD3Q9H7E2 651 aaKnown RBP8.21□□□□□ -1.1
TPR-208ENST00000492973 RC3H2Q9HBD1 1191 aaKnown RBP8.21□□□□□ -1.1
TPR-208ENST00000492973 PRR13Q9NZ81 148 aa8.21□□□□□ -1.1
TPR-208ENST00000492973 ZNF70Q9UC06 446 aaPredicted RBP8.21□□□□□ -1.1
TPR-208ENST00000492973 PCDHB12Q9Y5F1 795 aa8.21□□□□□ -1.1
TPR-208ENST00000492973 PCDHA11Q9Y5I1 949 aa8.21□□□□□ -1.1
TPR-208ENST00000492973 MROH7-TTC4A0A0A0MT08 1334 aa8.21□□□□□ -1.1
TPR-208ENST00000492973 GPR75-ASB3A0A0A6YYF3 556 aa8.2□□□□□ -1.1
TPR-208ENST00000492973 TCRBV5S4A2TA0A5A2 114 aa8.2□□□□□ -1.1
TPR-208ENST00000492973 CLRN2A0PK11 232 aa8.2□□□□□ -1.1
TPR-208ENST00000492973 PRAMEF1O95521 474 aa8.2□□□□□ -1.1
TPR-208ENST00000492973 SSBP05455 408 aaKnown RBP eCLIP8.2□□□□□ -1.1
TPR-208ENST00000492973 DNAJA1P31689 397 aaKnown RBP8.2□□□□□ -1.1
TPR-208ENST00000492973 BTDP43251 543 aa8.2□□□□□ -1.1
TPR-208ENST00000492973 RBM5P52756 815 aaKnown RBP eCLIP8.2□□□□□ -1.1
TPR-208ENST00000492973 RHBDL3P58872 404 aa8.2□□□□□ -1.1
TPR-208ENST00000492973 GSTO1P78417 241 aa8.2□□□□□ -1.1
TPR-208ENST00000492973 MAP3K12Q12852 859 aa8.2□□□□□ -1.1
TPR-208ENST00000492973 BBS9Q3SYG4 887 aa8.2□□□□□ -1.1
TPR-208ENST00000492973 ANKRD39Q53RE8 183 aa8.2□□□□□ -1.1
TPR-208ENST00000492973 SLC9C2Q5TAH2 1124 aa8.2□□□□□ -1.1
TPR-208ENST00000492973 CDC42EP5Q6NZY7 148 aa8.2□□□□□ -1.1
TPR-208ENST00000492973 DLK2Q6UY11 383 aa8.2□□□□□ -1.1
TPR-208ENST00000492973 CCDC144CPQ8IYA2 1237 aa8.2□□□□□ -1.1
TPR-208ENST00000492973 MAGEB6Q8N7X4 407 aa8.2□□□□□ -1.1
TPR-208ENST00000492973 GGA3Q9NZ52 723 aa8.2□□□□□ -1.1
TPR-208ENST00000492973 SCAF8Q9UPN6 1271 aaKnown RBP8.2□□□□□ -1.1
TPR-208ENST00000492973 MRVI1Q9Y6F6 885 aa8.2□□□□□ -1.1
TPR-208ENST00000492973 PSME4Q14997 1843 aa8.19□□□□□ -1.1
TPR-208ENST00000492973 AKAP11Q9UKA4 1901 aa8.19□□□□□ -1.1
TPR-208ENST00000492973 TOMM70O94826 608 aa8.19□□□□□ -1.1
TPR-208ENST00000492973 LDHCP07864 332 aa8.19□□□□□ -1.1
TPR-208ENST00000492973 ITGB5P18084 799 aa8.19□□□□□ -1.1
TPR-208ENST00000492973 ADD2P35612 726 aa8.19□□□□□ -1.1
TPR-208ENST00000492973 CACNB3P54284 484 aa8.19□□□□□ -1.1
TPR-208ENST00000492973 DYNLL1P63167 89 aaKnown RBP8.19□□□□□ -1.1
TPR-208ENST00000492973 EGR3Q06889 387 aa8.19□□□□□ -1.1
TPR-208ENST00000492973 UBE3CQ15386 1083 aa8.19□□□□□ -1.1
TPR-208ENST00000492973 NAALADL2Q58DX5 795 aa8.19□□□□□ -1.1
TPR-208ENST00000492973 DCAF15Q66K64 600 aa8.19□□□□□ -1.1
TPR-208ENST00000492973 ZNF655Q8N720 491 aaPredicted RBP8.19□□□□□ -1.1
TPR-208ENST00000492973 RILPL2Q969X0 211 aa8.19□□□□□ -1.1
TPR-208ENST00000492973 EVI5LQ96CN4 794 aa8.19□□□□□ -1.1
TPR-208ENST00000492973 ALPK1Q96QP1 1244 aa8.19□□□□□ -1.1
TPR-208ENST00000492973 GLIS2Q9BZE0 524 aaPredicted RBP8.19□□□□□ -1.1
TPR-208ENST00000492973 USP40Q9NVE5 1235 aa8.19□□□□□ -1.1
TPR-208ENST00000492973 C19orf73Q9NVV2 129 aa8.19□□□□□ -1.1
TPR-208ENST00000492973 ZNF532Q9HCE3 1301 aa8.19□□□□□ -1.1
TPR-208ENST00000492973 ADM5C9JUS6 153 aa8.18□□□□□ -1.1
TPR-208ENST00000492973 TRAF5O00463 557 aa8.18□□□□□ -1.1
TPR-208ENST00000492973 SMAD7O15105 426 aaKnown RBP8.18□□□□□ -1.1
TPR-208ENST00000492973 RNF113AO15541 343 aaKnown RBP8.18□□□□□ -1.1
TPR-208ENST00000492973 CDC45O75419 566 aa8.18□□□□□ -1.1
TPR-208ENST00000492973 WDHD1O75717 1129 aaPredicted RBP8.18□□□□□ -1.1
TPR-208ENST00000492973 TP53P04637 393 aaPredicted RBP8.18□□□□□ -1.1
TPR-208ENST00000492973 CHMLP26374 656 aa8.18□□□□□ -1.1
TPR-208ENST00000492973 ETFBP38117 255 aa8.18□□□□□ -1.1
TPR-208ENST00000492973 PPP2R5EQ16537 467 aa8.18□□□□□ -1.1
TPR-208ENST00000492973 MCTP1Q6DN14 999 aa8.18□□□□□ -1.1
TPR-208ENST00000492973 TMED8Q6PL24 325 aaPredicted RBP8.18□□□□□ -1.1
TPR-208ENST00000492973 KRT26Q7Z3Y9 468 aa8.18□□□□□ -1.1
TPR-208ENST00000492973 CNTROBQ8N137 903 aa8.18□□□□□ -1.1
TPR-208ENST00000492973 MIGA1Q8NAN2 632 aa8.18□□□□□ -1.1
TPR-208ENST00000492973 SH3RF3Q8TEJ3 882 aaPredicted RBP8.18□□□□□ -1.1
TPR-208ENST00000492973 KLHL6Q8WZ60 621 aa8.18□□□□□ -1.1
TPR-208ENST00000492973 OSBP2Q969R2 916 aa8.18□□□□□ -1.1
TPR-208ENST00000492973 TCTN2Q96GX1 697 aa8.18□□□□□ -1.1
TPR-208ENST00000492973 RIOK1Q9BRS2 568 aaKnown RBP8.18□□□□□ -1.1
TPR-208ENST00000492973 FSD1Q9BTV5 496 aa8.18□□□□□ -1.1
TPR-208ENST00000492973 VEZTQ9HBM0 779 aa8.18□□□□□ -1.1
TPR-208ENST00000492973 DDX4Q9NQI0 724 aaKnown RBP8.18□□□□□ -1.1
TPR-208ENST00000492973 CHST7Q9NS84 486 aa8.18□□□□□ -1.1
TPR-208ENST00000492973 GFOD1Q9NXC2 390 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms