RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 RGL1Q9NZL6 768 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 WRAP73Q9P2S5 460 aaPredicted RBP11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 AKT3Q9Y243 479 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 COL4A6Q14031 1691 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 TMEM150BA6NC51 233 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 GAS2O43903 313 aaKnown RBP11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 MAFO75444 373 aaPredicted RBP11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 GJB5O95377 273 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 CD52P31358 61 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 RFC5P40937 340 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 PRPHP41219 470 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 DNM2P50570 870 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 CRYBB1P53674 252 aaPredicted RBP11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 CTTNQ14247 550 aaKnown RBP11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 NBR1Q14596 966 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 HAUS3Q68CZ6 603 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 PLA2G4FQ68DD2 849 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 Q7L0L9 218 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 TPH2Q8IWU9 490 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 LRRC71Q8N4P6 559 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 C4orf32Q8N8J7 132 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 SLC17A8Q8NDX2 589 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 SLC7A3Q8WY07 619 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 CEP170P1Q96L14 293 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 RAB34Q9BZG1 259 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 TTYH1Q9H313 450 aaPredicted RBP11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 SEMA6BQ9H3T3 888 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 SUGCTQ9HAC7 445 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 SLC28A3Q9HAS3 691 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 TUFT1Q9NNX1 390 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 MTMR10Q9NXD2 777 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 YBX2Q9Y2T7 364 aaKnown RBP11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 PCDHB6Q9Y5E3 794 aa11.92□□□□□ -0.5
CDC42SE1-206ENST00000492796 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 TLL1O43897 1013 aa11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 GPR32O75388 356 aa11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 RPS6KA5O75582 802 aa11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 VTNP04004 478 aa11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 MUTP22033 750 aa11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 TECP42680 631 aa11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 GPC3P51654 580 aa11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 RABGGTBP53611 331 aa11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 POLGP54098 1239 aaPredicted RBP11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 PTGDRQ13258 359 aa11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 KIZQ2M2Z5 673 aa11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 MYOCDQ8IZQ8 938 aa11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 CCDC43Q96MW1 224 aaKnown RBP11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 OSMRQ99650 979 aa11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 ZBED2Q9BTP6 218 aa11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 POLR3CQ9BUI4 534 aaPredicted RBP11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 NKX2-4Q9H2Z4 354 aa11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 ZNF576Q9H609 170 aa11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 DHX33Q9H6R0 707 aaKnown RBP11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 AGO3Q9H9G7 860 aaKnown RBP11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 ANKEF1Q9NU02 776 aa11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 PADI3Q9ULW8 664 aa11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 GINS2Q9Y248 185 aa11.91□□□□□ -0.5
CDC42SE1-206ENST00000492796 CUL9Q8IWT3 2517 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 VPS37CA5D8V6 355 aaPredicted RBP11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 GPR182O15218 404 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 CA3P07451 260 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 XRCC6P12956 609 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 RPA1P27694 616 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 NPEPPSP55786 919 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 NLRP11P59045 1033 aaKnown RBP11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 ATP2C1P98194 919 aaPredicted RBP11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 PDIA5Q14554 519 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 XKR9Q5GH70 373 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 PPP2R2DQ66LE6 453 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 ZNF410Q86VK4 478 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 CATSPER3Q86XQ3 398 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 IGSF22Q8N9C0 903 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 TMEM40Q8WWA1 233 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 TCP11Q8WWU5 503 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 TOP1MTQ969P6 601 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 GUCD1Q96NT3 240 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 RAD9AQ99638 391 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 SH2D3AQ9BRG2 576 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 ADAMTS10Q9H324 1103 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 CDHR5Q9HBB8 845 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 ERVK-5Q9HDB9 667 aa11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 NOC2LQ9Y3T9 749 aaKnown RBP11.9□□□□□ -0.5
CDC42SE1-206ENST00000492796 DGAT1O75907 488 aa11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 BMP15O95972 392 aa11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 SPATA31C1P0DKV0 1188 aa11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 PDIA4P13667 645 aaKnown RBP11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 SYT1P21579 422 aa11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 EIF4BP23588 611 aaKnown RBP11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 HTRA4P83105 476 aaPredicted RBP11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 DRP2Q13474 957 aa11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 EMC2Q15006 297 aa11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 ARL6IP4Q66PJ3 421 aaKnown RBP11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 DTHD1Q6ZMT9 781 aa11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 FAM228AQ86W67 206 aa11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 NLRP7Q8WX94 980 aa11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 FAM161BQ96MY7 647 aa11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 SCLT1Q96NL6 688 aa11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 NACC1Q96RE7 527 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms