RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 VIL1P09327 827 aaKnown RBP13.61□□□□□ -0.23
HMGN1-220ENST00000492280 SP4Q02446 784 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 CXCL9Q07325 125 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 NAB2Q15742 525 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 DNAJC21Q5F1R6 531 aaKnown RBP13.61□□□□□ -0.23
HMGN1-220ENST00000492280 C8orf74Q6P047 294 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 FOXR1Q6PIV2 292 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 FRMD5Q7Z6J6 570 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 TSEN2Q8NCE0 465 aaKnown RBP13.61□□□□□ -0.23
HMGN1-220ENST00000492280 U2AF1L4Q8WU68 220 aaKnown RBP13.61□□□□□ -0.23
HMGN1-220ENST00000492280 KRT12Q99456 494 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 KIFC3Q9BVG8 833 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 KCNH7Q9NS40 1196 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 AIPL1Q9NZN9 384 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 TELO2Q9Y4R8 837 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 ZNF536O15090 1300 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 ATAD5Q96QE3 1844 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 K7ENM7 598 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 KCNK3O14649 394 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 MYCLP12524 364 aaPredicted RBP13.61□□□□□ -0.23
HMGN1-220ENST00000492280 KCNA3P22001 575 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 SOX10P56693 466 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 ITGB3BPQ13352 177 aaPredicted RBP13.61□□□□□ -0.23
HMGN1-220ENST00000492280 RASA3Q14644 834 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 UGCGQ16739 394 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 ALKBH5Q6P6C2 394 aaKnown RBP13.61□□□□□ -0.23
HMGN1-220ENST00000492280 GLYCTKQ8IVS8 523 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 IFT81Q8WYA0 676 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 OSGEPQ9NPF4 335 aa13.61□□□□□ -0.23
HMGN1-220ENST00000492280 RGS17Q9UGC6 210 aaPredicted RBP13.61□□□□□ -0.23
HMGN1-220ENST00000492280 FAM153BP0C7A2 387 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 TCP1P17987 556 aaKnown RBP13.6□□□□□ -0.23
HMGN1-220ENST00000492280 PPP2R5CQ13362 524 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 FRMPD4Q14CM0 1322 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 FAM153CQ494X1 144 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 PLA2G4FQ68DD2 849 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 GBP6Q6ZN66 633 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 SUPT20HQ8NEM7 779 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 CHURC1Q8WUH1 139 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 AP1M1Q9BXS5 423 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 AGPAT3Q9NRZ7 376 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 FAM153AQ9UHL3 310 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 NAGPAQ9UK23 515 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 IGSF9BQ9UPX0 1349 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 ARHGEF35A5YM69 484 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 AGPSO00116 658 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 EVI5O60447 810 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 PAFAH1B1P43034 410 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 CARSP49589 748 aaKnown RBP13.6□□□□□ -0.23
HMGN1-220ENST00000492280 GUCY2FP51841 1108 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 GPS2Q13227 327 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 TTC19Q6DKK2 380 aaPredicted RBP13.6□□□□□ -0.23
HMGN1-220ENST00000492280 SYCP3Q8IZU3 236 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 TEKT3Q9BXF9 490 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 EDEM3Q9BZQ6 932 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 ACP6Q9NPH0 428 aa13.6□□□□□ -0.23
HMGN1-220ENST00000492280 MRPL11Q9Y3B7 192 aaKnown RBP13.6□□□□□ -0.23
HMGN1-220ENST00000492280 GOLGA8IPA6NC78 632 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 GOLGA8JA6NMD2 632 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 DDX3XO00571 662 aaKnown RBP eCLIP13.59□□□□□ -0.235e-16■■■■□ 24.5
HMGN1-220ENST00000492280 CAPN2P17655 700 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 GUCY2DQ02846 1103 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 MAPK7Q13164 816 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 ZNF720Q7Z2F6 126 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 SAMD7Q7Z3H4 446 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 MIER3Q7Z3K6 550 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 ADAT2Q7Z6V5 191 aaKnown RBP13.59□□□□□ -0.23
HMGN1-220ENST00000492280 LNX1Q8TBB1 728 aaPredicted RBP13.59□□□□□ -0.23
HMGN1-220ENST00000492280 CBWD1Q9BRT8 395 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 OLFML3Q9NRN5 406 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 TAS2R14Q9NYV8 317 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 STIM2Q9P246 746 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 NFU1Q9UMS0 254 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 DOCK5Q9H7D0 1870 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 FER1L6Q2WGJ9 1857 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 PSME4Q14997 1843 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 ATP9AO75110 1047 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 FLOT1O75955 427 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 HEXIM1O94992 359 aaKnown RBP13.59□□□□□ -0.23
HMGN1-220ENST00000492280 NPEPPSP55786 919 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 MRPS9P82933 396 aaKnown RBP13.59□□□□□ -0.23
HMGN1-220ENST00000492280 BMT2Q1RMZ1 405 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 NAA35Q5VZE5 725 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 PADI6Q6TGC4 694 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 NSMFQ6X4W1 530 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 NIM1KQ8IY84 436 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 MMGT1Q8N4V1 131 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 AENQ8WTP8 325 aaKnown RBP13.59□□□□□ -0.23
HMGN1-220ENST00000492280 KAT5Q92993 513 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 BORCS6Q96GS4 357 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 RPGRIP1Q96KN7 1286 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 TAAR1Q96RJ0 339 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 ZHX2Q9Y6X8 837 aa13.59□□□□□ -0.23
HMGN1-220ENST00000492280 TARSL2A2RTX5 802 aaKnown RBP13.58□□□□□ -0.24
HMGN1-220ENST00000492280 EXOC3O60645 756 aa13.58□□□□□ -0.24
HMGN1-220ENST00000492280 ZBTB7AO95365 584 aa13.58□□□□□ -0.24
HMGN1-220ENST00000492280 RPL13P26373 211 aaKnown RBP13.58□□□□□ -0.24
HMGN1-220ENST00000492280 FMO5P49326 533 aa13.58□□□□□ -0.24
HMGN1-220ENST00000492280 MTMR2Q13614 643 aa13.58□□□□□ -0.24
HMGN1-220ENST00000492280 MEI1Q5TIA1 1274 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms