RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 RTEL1Q9NZ71 1219 aa13.49□□□□□ -0.25
CACNA1C-228ENST00000492150 COL4A3Q01955 1670 aa13.49□□□□□ -0.25
CACNA1C-228ENST00000492150 NARSO43776 548 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-228ENST00000492150 FOXD2O60548 495 aaPredicted RBP13.48□□□□□ -0.25
CACNA1C-228ENST00000492150 CFHP08603 1231 aa13.48□□□□□ -0.25
CACNA1C-228ENST00000492150 TRAF1Q13077 416 aa13.48□□□□□ -0.25
CACNA1C-228ENST00000492150 LPIN1Q14693 890 aa13.48□□□□□ -0.25
CACNA1C-228ENST00000492150 GRM4Q14833 912 aa13.48□□□□□ -0.25
CACNA1C-228ENST00000492150 NONOQ15233 471 aaKnown RBP eCLIP13.48□□□□□ -0.25
CACNA1C-228ENST00000492150 SMC5Q8IY18 1101 aa13.48□□□□□ -0.25
CACNA1C-228ENST00000492150 LINC01599Q8WXQ3 324 aa13.48□□□□□ -0.25
CACNA1C-228ENST00000492150 MRPS27Q92552 414 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-228ENST00000492150 TCF25Q9BQ70 676 aa13.48□□□□□ -0.25
CACNA1C-228ENST00000492150 FTHL17Q9BXU8 183 aa13.48□□□□□ -0.25
CACNA1C-228ENST00000492150 IL25Q9H293 177 aa13.48□□□□□ -0.25
CACNA1C-228ENST00000492150 SENP2Q9HC62 589 aa13.48□□□□□ -0.25
CACNA1C-228ENST00000492150 DZANK1Q9NVP4 752 aa13.48□□□□□ -0.25
CACNA1C-228ENST00000492150 TMEM260Q9NX78 707 aa13.48□□□□□ -0.25
CACNA1C-228ENST00000492150 DOCK5Q9H7D0 1870 aa13.48□□□□□ -0.25
CACNA1C-228ENST00000492150 DSPP15924 2871 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-228ENST00000492150 BPTFQ12830 3046 aa13.47□□□□□ -0.25
CACNA1C-228ENST00000492150 PNMA6FA0A0J9YX94 578 aa13.47□□□□□ -0.25
CACNA1C-228ENST00000492150 HIDE1A8MVS5 230 aa13.47□□□□□ -0.25
CACNA1C-228ENST00000492150 FIBPO43427 364 aa13.47□□□□□ -0.25
CACNA1C-228ENST00000492150 LAMTOR5O43504 91 aa13.47□□□□□ -0.25
CACNA1C-228ENST00000492150 STAM2O75886 525 aa13.47□□□□□ -0.25
CACNA1C-228ENST00000492150 SRFP11831 508 aa13.47□□□□□ -0.25
CACNA1C-228ENST00000492150 MGAT3Q09327 533 aa13.47□□□□□ -0.25
CACNA1C-228ENST00000492150 SPEM2Q0P670 501 aa13.47□□□□□ -0.25
CACNA1C-228ENST00000492150 B4GALNT3Q6L9W6 998 aa13.47□□□□□ -0.25
CACNA1C-228ENST00000492150 THNSL1Q8IYQ7 743 aa13.47□□□□□ -0.25
CACNA1C-228ENST00000492150 SENP7Q9BQF6 1050 aa13.47□□□□□ -0.25
CACNA1C-228ENST00000492150 ENTPD7Q9NQZ7 604 aa13.47□□□□□ -0.25
CACNA1C-228ENST00000492150 ZNF215Q9UL58 517 aaPredicted RBP13.47□□□□□ -0.25
CACNA1C-228ENST00000492150 WDFY3Q8IZQ1 3526 aa13.47□□□□□ -0.25
CACNA1C-228ENST00000492150 LOC400499M0QZD8 3231 aa13.47□□□□□ -0.25
CACNA1C-228ENST00000492150 NRCAMQ92823 1304 aa13.46□□□□□ -0.25
CACNA1C-228ENST00000492150 C2orf16Q68DN1 1984 aa13.46□□□□□ -0.25
CACNA1C-228ENST00000492150 HIP1O00291 1037 aa13.46□□□□□ -0.25
CACNA1C-228ENST00000492150 WEE2P0C1S8 567 aa13.46□□□□□ -0.25
CACNA1C-228ENST00000492150 LIMK1P53667 647 aa13.46□□□□□ -0.25
CACNA1C-228ENST00000492150 SP4Q02446 784 aa13.46□□□□□ -0.25
CACNA1C-228ENST00000492150 SOWAHCQ53LP3 525 aaPredicted RBP13.46□□□□□ -0.25
CACNA1C-228ENST00000492150 RARS2Q5T160 578 aaKnown RBP13.46□□□□□ -0.25
CACNA1C-228ENST00000492150 PRR23CQ6ZRP0 262 aa13.46□□□□□ -0.25
CACNA1C-228ENST00000492150 TSHZ1Q6ZSZ6 1077 aa13.46□□□□□ -0.25
CACNA1C-228ENST00000492150 CCDC149Q6ZUS6 474 aa13.46□□□□□ -0.25
CACNA1C-228ENST00000492150 CHD1LQ86WJ1 897 aa13.46□□□□□ -0.25
CACNA1C-228ENST00000492150 ARHGEF3Q9NR81 526 aa13.46□□□□□ -0.25
CACNA1C-228ENST00000492150 ANKFY1Q9P2R3 1169 aa13.46□□□□□ -0.25
CACNA1C-228ENST00000492150 PUF60Q9UHX1 559 aaKnown RBP13.46□□□□□ -0.25
CACNA1C-228ENST00000492150 CA14Q9ULX7 337 aa13.46□□□□□ -0.25
CACNA1C-228ENST00000492150 TM4SF5O14894 197 aa13.45□□□□□ -0.26
CACNA1C-228ENST00000492150 KCNA4P22459 653 aa13.45□□□□□ -0.26
CACNA1C-228ENST00000492150 MAGEA9P43362 315 aa13.45□□□□□ -0.26
CACNA1C-228ENST00000492150 TROAPQ12815 778 aa13.45□□□□□ -0.26
CACNA1C-228ENST00000492150 FBXO47Q5MNV8 452 aa13.45□□□□□ -0.26
CACNA1C-228ENST00000492150 LAIR1Q6GTX8 287 aa13.45□□□□□ -0.26
CACNA1C-228ENST00000492150 TAF2Q6P1X5 1199 aa13.45□□□□□ -0.26
CACNA1C-228ENST00000492150 COLGALT1Q8NBJ5 622 aa13.45□□□□□ -0.26
CACNA1C-228ENST00000492150 NXPE3Q969Y0 559 aa13.45□□□□□ -0.26
CACNA1C-228ENST00000492150 FAM126AQ9BYI3 521 aaPredicted RBP13.45□□□□□ -0.26
CACNA1C-228ENST00000492150 DACH1Q9UI36 760 aa13.45□□□□□ -0.26
CACNA1C-228ENST00000492150 MBLAC1A4D2B0 266 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 IFIT3O14879 490 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 ATP9AO75110 1047 aa13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 RETP07949 1114 aa13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 TCF7P36402 384 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 STARD6P59095 220 aa13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 NUCB1Q02818 461 aa13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 APOBRQ0VD83 1088 aa13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 PPFIA1Q13136 1202 aa13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 CSRP2Q16527 193 aa13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 MARCH8Q5T0T0 291 aa13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 SPOUT1Q5T280 376 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 PCNX4Q63HM2 1172 aa13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 IL31Q6EBC2 164 aa13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 USP17L6PQ6QN14 398 aa13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 FAM43BQ6ZT52 329 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 RTN4RL1Q86UN2 441 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 DNAJB3Q8WWF6 145 aa13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 PIBF1Q8WXW3 757 aa13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 AGO3Q9H9G7 860 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 SEMA4GQ9NTN9 838 aa13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 SPATA6Q9NWH7 488 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 SQORQ9Y6N5 450 aa13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 ADAMTS20P59510 1910 aa13.44□□□□□ -0.26
CACNA1C-228ENST00000492150 DOCK8Q8NF50 2099 aa13.43□□□□□ -0.26
CACNA1C-228ENST00000492150 GSTTP1A0A1W2PQM5 241 aa13.43□□□□□ -0.26
CACNA1C-228ENST00000492150 MEIS2O14770 477 aa13.43□□□□□ -0.26
CACNA1C-228ENST00000492150 SCG2P13521 617 aa13.43□□□□□ -0.26
CACNA1C-228ENST00000492150 LAG3P18627 525 aa13.43□□□□□ -0.26
CACNA1C-228ENST00000492150 CSTF1Q05048 431 aaKnown RBP13.43□□□□□ -0.26
CACNA1C-228ENST00000492150 GRIK4Q16099 956 aa13.43□□□□□ -0.26
CACNA1C-228ENST00000492150 PRR23BQ6ZRT6 265 aa13.43□□□□□ -0.26
CACNA1C-228ENST00000492150 RSPH3Q86UC2 560 aa13.43□□□□□ -0.26
CACNA1C-228ENST00000492150 MAP4K1Q92918 833 aa13.43□□□□□ -0.26
CACNA1C-228ENST00000492150 BCO2Q9BYV7 579 aa13.43□□□□□ -0.26
CACNA1C-228ENST00000492150 TUBE1Q9UJT0 475 aa13.43□□□□□ -0.26
CACNA1C-228ENST00000492150 RAB23Q9ULC3 237 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms