RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 USP37Q86T82 979 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 FMNL3Q8IVF7 1028 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 TAB3Q8N5C8 712 aaPredicted RBP11.68□□□□□ -0.54
SNED1-211ENST00000491761 U2AF1L4Q8WU68 220 aaKnown RBP11.68□□□□□ -0.54
SNED1-211ENST00000491761 MTMR8Q96EF0 704 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 TYW1Q9NV66 732 aaKnown RBP11.68□□□□□ -0.54
SNED1-211ENST00000491761 DMGDHQ9UI17 866 aaKnown RBP11.68□□□□□ -0.54
SNED1-211ENST00000491761 GRID2IPA4D2P6 1211 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 CLGNO14967 610 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 LCA5LO95447 670 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 HARSP12081 509 aaKnown RBP11.68□□□□□ -0.54
SNED1-211ENST00000491761 RPA1P27694 616 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 MKRN3Q13064 507 aaKnown RBP11.68□□□□□ -0.54
SNED1-211ENST00000491761 HYIQ5T013 277 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 APOBEC3HQ6NTF7 200 aaKnown RBP11.68□□□□□ -0.54
SNED1-211ENST00000491761 ALKBH5Q6P6C2 394 aaKnown RBP11.68□□□□□ -0.54
SNED1-211ENST00000491761 SYCE1Q8N0S2 351 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 SPICE1Q8N0Z3 855 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 CCDC26Q8TAB7 109 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 MS4A14Q96JA4 679 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 REEP2Q9BRK0 252 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 RBM12Q9NTZ6 932 aaKnown RBP11.68□□□□□ -0.54
SNED1-211ENST00000491761 ASIC3Q9UHC3 531 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 GAS7O60861 476 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 KLRC1P26715 233 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 CLK2P49760 499 aaKnown RBP11.67□□□□□ -0.54
SNED1-211ENST00000491761 APBA1Q02410 837 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 EZH2Q15910 746 aaKnown RBP11.67□□□□□ -0.54
SNED1-211ENST00000491761 C6orf163Q5TEZ5 329 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 ARHGEF2Q92974 986 aaKnown RBP11.67□□□□□ -0.54
SNED1-211ENST00000491761 EHD2Q9NZN4 543 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 DLEC1Q9Y238 1755 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 WNK3Q9BYP7 1800 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 GH2P01242 217 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 FERP16591 822 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 PSMC2P35998 433 aaKnown RBP11.67□□□□□ -0.54
SNED1-211ENST00000491761 LRCH2Q5VUJ6 765 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 SULF1Q8IWU6 871 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 TCP11Q8WWU5 503 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 PBKQ96KB5 322 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 TLR10Q9BXR5 811 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 NKIRAS1Q9NYS0 192 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 GCNT4Q9P109 453 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 ABT1Q9ULW3 272 aaKnown RBP11.67□□□□□ -0.54
SNED1-211ENST00000491761 KIAA1551Q9HCM1 1747 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 A0A087X0T9 212 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 NDUFB10O96000 172 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 FAM228BP0C875 321 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 POLR2MP0CAP2 368 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 CA8P35219 290 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 SETDB1Q15047 1291 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 KLHDC7AQ5VTJ3 777 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 FAM186BQ8IYM0 893 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 SYT2Q8N9I0 419 aaPredicted RBP11.67□□□□□ -0.54
SNED1-211ENST00000491761 ZDHHC15Q96MV8 337 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.67□□□□□ -0.54
SNED1-211ENST00000491761 KCNMB3Q9NPA1 279 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 NFU1Q9UMS0 254 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 BACH1O14867 736 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 PPFIA4O75335 1185 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 ACTN1P12814 892 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 ZNF131P52739 623 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 ZCWPW2Q504Y3 356 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 CTTNBP2NLQ9P2B4 639 aa11.67□□□□□ -0.54
SNED1-211ENST00000491761 ARHGEF35A5YM69 484 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 EIF4E1BA6NMX2 242 aaKnown RBP11.66□□□□□ -0.54
SNED1-211ENST00000491761 NKRFO15226 690 aaKnown RBP eCLIP11.66□□□□□ -0.54
SNED1-211ENST00000491761 UCHL3P15374 230 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 SLC9A1P19634 815 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 GCKP35557 465 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 SESN3P58005 492 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 GIT2Q14161 759 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 FAM178BQ8IXR5 827 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 CSRNP1Q96S65 589 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 EIF2AK1Q9BQI3 630 aaKnown RBP11.66□□□□□ -0.54
SNED1-211ENST00000491761 IMPG2Q9BZV3 1241 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 PICK1Q9NRD5 415 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 PACSIN2Q9UNF0 486 aaPredicted RBP11.66□□□□□ -0.54
SNED1-211ENST00000491761 EYA4O95677 639 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 TNFAIP3P21580 790 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 CTTNQ14247 550 aaKnown RBP11.66□□□□□ -0.54
SNED1-211ENST00000491761 ZFPM1Q8IX07 1006 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 AENQ8WTP8 325 aaKnown RBP11.66□□□□□ -0.54
SNED1-211ENST00000491761 CHURC1Q8WUH1 139 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 HDAC7Q8WUI4 952 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 UTP11Q9Y3A2 253 aaKnown RBP11.66□□□□□ -0.54
SNED1-211ENST00000491761 NAV1Q8NEY1 1877 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 NRAPQ86VF7 1730 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 CYP3A7-CYP3A51PA0A087WV96 503 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 SFI1A8K8P3 1242 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 MYBP10242 640 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 CYP3A7P24462 503 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 CYP2J2P51589 502 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 STRIP1Q5VSL9 837 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 CC2D2BQ6DHV5 1058 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 CCDC105Q8IYK2 499 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 PIGOQ8TEQ8 1089 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 MKL1Q969V6 931 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 LRRC45Q96CN5 670 aa11.66□□□□□ -0.54
SNED1-211ENST00000491761 AIPL1Q9NZN9 384 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms