RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 KIAA0319LQ8IZA0 1049 aa12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 NSUN7Q8NE18 718 aaKnown RBP12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 ZNF577Q9BSK1 485 aa12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 ERVK-5Q9HDB9 667 aa12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 ALG13Q9NP73 1137 aaKnown RBP12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 TSHZ2Q9NRE2 1034 aa12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 VPS54Q9P1Q0 977 aa12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 HCSTQ9UBK5 93 aa12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 GINS2Q9Y248 185 aa12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 C5orf42Q9H799 3197 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 COL1A2P08123 1366 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 GRXCR2A6NFK2 248 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 M0QZ92 97 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 LINC01565O15544 149 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 HBP1O60381 514 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 CTDNEP1O95476 244 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 LTBRP36941 435 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 SLC26A2P50443 739 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 DLX2Q07687 328 aaPredicted RBP12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 HYAL1Q12794 435 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 GNL2Q13823 731 aaKnown RBP12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 PRR16Q569H4 304 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 FAM160B1Q5W0V3 765 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 MIS18BP1Q6P0N0 1132 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 EP400NLQ6ZTU2 488 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 ADGRD2Q7Z7M1 963 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 NPAS4Q8IUM7 802 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 FAM178BQ8IXR5 827 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 BLIDQ8IZY5 108 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 GJA10Q969M2 543 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 PABPC5Q96DU9 382 aaKnown RBP12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 INTS4Q96HW7 963 aaKnown RBP12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 C8orf76Q96K31 380 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 C11orf84Q9BUA3 381 aaPredicted RBP12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 KCNH6Q9H252 994 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 CLDND1Q9NY35 253 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 TCEAL9Q9UHQ7 104 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 PCDHA4Q9UN74 947 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 NOC2LQ9Y3T9 749 aaKnown RBP12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 SQORQ9Y6N5 450 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 ZNF318Q5VUA4 2279 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 ARID2Q68CP9 1835 aa12.44□□□□□ -0.42
TMEM39A-211ENST00000491685 H3BQV1 296 aa12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 TBX10O75333 385 aa12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 MMP1P03956 469 aa12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 VTNP04004 478 aa12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 RB1P06400 928 aa12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 PDCP20941 246 aa12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 CIITAP33076 1130 aa12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 IRS1P35568 1242 aa12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 SETQ01105 290 aaPredicted RBP12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 NFX1Q12986 1120 aaKnown RBP12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 CLUL1Q15846 466 aa12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 UGCGQ16739 394 aa12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 KIZQ2M2Z5 673 aa12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 CMTR2Q8IYT2 770 aaKnown RBP12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 GJD3Q8N144 294 aa12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 OSMRQ99650 979 aa12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 FTHL17Q9BXU8 183 aa12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 GABBR1Q9UBS5 961 aa12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 PCDHGC5Q9Y5F6 944 aa12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 MAFBQ9Y5Q3 323 aaPredicted RBP12.43□□□□□ -0.42
TMEM39A-211ENST00000491685 CCDC194A0A1B0GVG4 234 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 MSH4O15457 936 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 ZNF862O60290 1169 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 DTNBO60941 627 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 GPR32O75388 356 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 ITGB1P05556 798 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 ALADP13716 330 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 FDPSP14324 419 aaKnown RBP12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 CLCN3P51790 818 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 NHLH1Q02575 133 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 CUL4AQ13619 759 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 CTC1Q2NKJ3 1217 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 ZNF484Q5JVG2 852 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 LARP1BQ659C4 914 aaKnown RBP12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 ZNF746Q6NUN9 644 aaPredicted RBP12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 FAM228AQ86W67 206 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 CKAP2LQ8IYA6 745 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 NME8Q8N427 588 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 LINC01465Q8N7H1 131 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 ZNF668Q96K58 619 aaPredicted RBP12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 SNX27Q96L92 541 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 AIFM3Q96NN9 605 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 NAP1L4Q99733 375 aaKnown RBP12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 LMAN2LQ9H0V9 348 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 RNF216Q9NWF9 866 aaPredicted RBP12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 ST3GAL5Q9UNP4 418 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 PLAGL2Q9UPG8 496 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 RWDD3Q9Y3V2 267 aa12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 RBM19Q9Y4C8 960 aaKnown RBP12.42□□□□□ -0.42
TMEM39A-211ENST00000491685 JAK2O60674 1132 aa12.41□□□□□ -0.42
TMEM39A-211ENST00000491685 RPS6KA5O75582 802 aa12.41□□□□□ -0.42
TMEM39A-211ENST00000491685 CD2BP2O95400 341 aaKnown RBP12.41□□□□□ -0.42
TMEM39A-211ENST00000491685 PSAPP07602 524 aa12.41□□□□□ -0.42
TMEM39A-211ENST00000491685 GJB2P29033 226 aa12.41□□□□□ -0.42
TMEM39A-211ENST00000491685 KRT2P35908 639 aa12.41□□□□□ -0.42
TMEM39A-211ENST00000491685 SARSP49591 514 aaKnown RBP12.41□□□□□ -0.42
TMEM39A-211ENST00000491685 USP11P51784 963 aa12.41□□□□□ -0.42
TMEM39A-211ENST00000491685 FAM102BQ5T8I3 360 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms