RNA–Protein interactions for RNA: ENST00000491584.1

PTPN7-214, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-214ENST00000491584 FOSL2P15408 326 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 SELPP16109 830 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 ATP4AP20648 1035 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 DNAJB2P25686 324 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 MARCKSP29966 332 aaPredicted RBP13.32□□□□□ -0.28
PTPN7-214ENST00000491584 HOXC8P31273 242 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 POLGP54098 1239 aaPredicted RBP13.32□□□□□ -0.28
PTPN7-214ENST00000491584 DNM1Q05193 864 aaKnown RBP13.32□□□□□ -0.28
PTPN7-214ENST00000491584 PPIGQ13427 754 aaKnown RBP eCLIP13.32□□□□□ -0.28
PTPN7-214ENST00000491584 PTPAQ15257 358 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 MTERF2Q49AM1 385 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 TMEM240Q5SV17 173 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 MFSD5Q6N075 450 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 EFCAB12Q6NXP0 572 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 RPAINQ86UA6 219 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 CABP7Q86V35 215 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 ZNF579Q8NAF0 562 aaKnown RBP13.32□□□□□ -0.28
PTPN7-214ENST00000491584 SPATA32Q96LK8 384 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 PYM1Q9BRP8 204 aaKnown RBP13.32□□□□□ -0.28
PTPN7-214ENST00000491584 SUGCTQ9HAC7 445 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 FAM13BQ9NYF5 915 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 RCOR1Q9UKL0 485 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 KIAA1024Q9UPX6 916 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 RSPH10B2B2RC85 870 aa13.31□□□□□ -0.28
PTPN7-214ENST00000491584 ASAP2O43150 1006 aa13.31□□□□□ -0.28
PTPN7-214ENST00000491584 DGAT1O75907 488 aa13.31□□□□□ -0.28
PTPN7-214ENST00000491584 PFKMP08237 780 aa13.31□□□□□ -0.28
PTPN7-214ENST00000491584 RSPH10BP0C881 870 aa13.31□□□□□ -0.28
PTPN7-214ENST00000491584 ADAM17P78536 824 aa13.31□□□□□ -0.28
PTPN7-214ENST00000491584 ZNF200P98182 395 aaPredicted RBP13.31□□□□□ -0.28
PTPN7-214ENST00000491584 PKP1Q13835 747 aa13.31□□□□□ -0.28
PTPN7-214ENST00000491584 UGCGQ16739 394 aa13.31□□□□□ -0.28
PTPN7-214ENST00000491584 ANO5Q75V66 913 aa13.31□□□□□ -0.28
PTPN7-214ENST00000491584 VWCEQ96DN2 955 aa13.31□□□□□ -0.28
PTPN7-214ENST00000491584 NOC4LQ9BVI4 516 aaKnown RBP13.31□□□□□ -0.28
PTPN7-214ENST00000491584 MTIF3Q9H2K0 278 aaKnown RBP13.31□□□□□ -0.28
PTPN7-214ENST00000491584 TSHZ2Q9NRE2 1034 aa13.31□□□□□ -0.28
PTPN7-214ENST00000491584 BMP2KQ9NSY1 1161 aaPredicted RBP13.31□□□□□ -0.28
PTPN7-214ENST00000491584 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-214ENST00000491584 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-214ENST00000491584 MAFO75444 373 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-214ENST00000491584 SPATA31C1P0DKV0 1188 aa13.3□□□□□ -0.28
PTPN7-214ENST00000491584 CKBP12277 381 aa13.3□□□□□ -0.28
PTPN7-214ENST00000491584 ACTN1P12814 892 aa13.3□□□□□ -0.28
PTPN7-214ENST00000491584 PBX2P40425 430 aa13.3□□□□□ -0.28
PTPN7-214ENST00000491584 RBL2Q08999 1139 aa13.3□□□□□ -0.28
PTPN7-214ENST00000491584 TARBP2Q15633 366 aaKnown RBP13.3□□□□□ -0.28
PTPN7-214ENST00000491584 IL17AQ16552 155 aa13.3□□□□□ -0.28
PTPN7-214ENST00000491584 MARCH8Q5T0T0 291 aa13.3□□□□□ -0.28
PTPN7-214ENST00000491584 CCDC73Q6ZRK6 1079 aa13.3□□□□□ -0.28
PTPN7-214ENST00000491584 LRRC8DQ7L1W4 858 aa13.3□□□□□ -0.28
PTPN7-214ENST00000491584 MCPH1Q8NEM0 835 aa13.3□□□□□ -0.28
PTPN7-214ENST00000491584 PPP1R13LQ8WUF5 828 aa13.3□□□□□ -0.28
PTPN7-214ENST00000491584 CCDC34Q96HJ3 373 aa13.3□□□□□ -0.28
PTPN7-214ENST00000491584 SCLT1Q96NL6 688 aa13.3□□□□□ -0.28
PTPN7-214ENST00000491584 PPP1R12CQ9BZL4 782 aa13.3□□□□□ -0.28
PTPN7-214ENST00000491584 INO80BQ9C086 356 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-214ENST00000491584 FTOQ9C0B1 505 aaKnown RBP eCLIP13.3□□□□□ -0.28
PTPN7-214ENST00000491584 CCSER1Q9C0I3 900 aa13.3□□□□□ -0.28
PTPN7-214ENST00000491584 LRRC27Q9C0I9 530 aa13.3□□□□□ -0.28
PTPN7-214ENST00000491584 FAM49AQ9H0Q0 323 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-214ENST00000491584 CSRNP2Q9H175 543 aa13.3□□□□□ -0.28
PTPN7-214ENST00000491584 DDX19AQ9NUU7 478 aaKnown RBP13.3□□□□□ -0.28
PTPN7-214ENST00000491584 FBXO2Q9UK22 296 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-214ENST00000491584 ZDHHC9Q9Y397 364 aa13.3□□□□□ -0.28
PTPN7-214ENST00000491584 MED24O75448 989 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 C22orf31O95567 290 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 EYA4O95677 639 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 IQCF3P0C7M6 154 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 CSF2RAP15509 400 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 CYP2C18P33260 490 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 NCBP1Q09161 790 aaKnown RBP13.29□□□□□ -0.28
PTPN7-214ENST00000491584 TFDP1Q14186 410 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 MXD4Q14582 209 aaPredicted RBP13.29□□□□□ -0.28
PTPN7-214ENST00000491584 RRAGBQ5VZM2 374 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 PIGOQ8TEQ8 1089 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 TRAPPC12Q8WVT3 735 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 DNAJB3Q8WWF6 145 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 PSPC1Q8WXF1 523 aaKnown RBP13.29□□□□□ -0.28
PTPN7-214ENST00000491584 TIPINQ9BVW5 301 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 PBX4Q9BYU1 374 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 ZNF576Q9H609 170 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 ATP6V0A4Q9HBG4 840 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 RNF216Q9NWF9 866 aaPredicted RBP13.29□□□□□ -0.28
PTPN7-214ENST00000491584 KCND2Q9NZV8 630 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 AKT3Q9Y243 479 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 SQORQ9Y6N5 450 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 UMODL1Q5DID0 1318 aa13.29□□□□□ -0.28
PTPN7-214ENST00000491584 GRXCR1A8MXD5 290 aa13.28□□□□□ -0.28
PTPN7-214ENST00000491584 STBD1O95210 358 aa13.28□□□□□ -0.28
PTPN7-214ENST00000491584 SSBP05455 408 aaKnown RBP eCLIP13.28□□□□□ -0.28
PTPN7-214ENST00000491584 CDC25AP30304 524 aa13.28□□□□□ -0.28
PTPN7-214ENST00000491584 DDIT3P35638 169 aa13.28□□□□□ -0.28
PTPN7-214ENST00000491584 RARRES1P49788 294 aa13.28□□□□□ -0.28
PTPN7-214ENST00000491584 CCL23P55773 120 aa13.28□□□□□ -0.28
PTPN7-214ENST00000491584 NPEPPSP55786 919 aa13.28□□□□□ -0.28
PTPN7-214ENST00000491584 MRPS6P82932 125 aaKnown RBP13.28□□□□□ -0.28
PTPN7-214ENST00000491584 AMPD3Q01432 767 aa13.28□□□□□ -0.28
PTPN7-214ENST00000491584 FAM26DQ5JW98 314 aa13.28□□□□□ -0.28
PTPN7-214ENST00000491584 HYIQ5T013 277 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms