RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ZNF131P52739 623 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 FKBP3Q00688 224 aaKnown RBP15.35■□□□□ 0.05
SMPD4-219ENST00000491128 LRRC63Q05C16 580 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 GPR20Q99678 358 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 ARHGAP39Q9C0H5 1083 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 XPNPEP1Q9NQW7 623 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 OLFML3Q9NRN5 406 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 MAFBQ9Y5Q3 323 aaPredicted RBP15.35■□□□□ 0.05
SMPD4-219ENST00000491128 ZMYM2Q9UBW7 1377 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 ADCY6O43306 1168 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 TGFB3P10600 412 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 SFPQP23246 707 aaKnown RBP eCLIP15.34■□□□□ 0.05
SMPD4-219ENST00000491128 EEF1GP26641 437 aaKnown RBP15.34■□□□□ 0.05
SMPD4-219ENST00000491128 CASP14P31944 242 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 CCZ1BP86790 482 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 CCZ1P86791 482 aaPredicted RBP15.34■□□□□ 0.05
SMPD4-219ENST00000491128 APBA1Q02410 837 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 DRP2Q13474 957 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 GRB14Q14449 540 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 CCDC40Q4G0X9 1142 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 OTUD6AQ7L8S5 288 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 ZSWIM2Q8NEG5 633 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 SEPT1Q8WYJ6 367 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 MPHOSPH6Q99547 160 aaKnown RBP15.34■□□□□ 0.05
SMPD4-219ENST00000491128 PCIF1Q9H4Z3 704 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 ODF2LQ9ULJ1 636 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 PCDHB13Q9Y5F0 798 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 ASB14A6NK59 587 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 TMEM88BA6NKF7 163 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 STRNO43815 780 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 GAP43P17677 238 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 CYP2C19P33261 490 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 PBX1P40424 430 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 FXR1P51114 621 aaKnown RBP eCLIP15.34■□□□□ 0.05
SMPD4-219ENST00000491128 CYP2J2P51589 502 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 SPAG1Q07617 926 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 SMC1BQ8NDV3 1235 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 RDM1Q8NG50 284 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 ZNF507Q8TCN5 953 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 ANKEF1Q9NU02 776 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 IGSF9BQ9UPX0 1349 aa15.34■□□□□ 0.05
SMPD4-219ENST00000491128 TLR2O60603 784 aa15.33■□□□□ 0.05
SMPD4-219ENST00000491128 OATP04181 439 aa15.33■□□□□ 0.05
SMPD4-219ENST00000491128 PPP1R2P41236 205 aa15.33■□□□□ 0.05
SMPD4-219ENST00000491128 TBC1D8BQ0IIM8 1120 aa15.33■□□□□ 0.05
SMPD4-219ENST00000491128 TTLL4Q14679 1199 aa15.33■□□□□ 0.05
SMPD4-219ENST00000491128 SYCP3Q8IZU3 236 aa15.33■□□□□ 0.05
SMPD4-219ENST00000491128 PCMTD1Q96MG8 357 aaPredicted RBP15.33■□□□□ 0.05
SMPD4-219ENST00000491128 LARSQ9P2J5 1176 aaKnown RBP15.33■□□□□ 0.05
SMPD4-219ENST00000491128 AKAP3O75969 853 aa15.33■□□□□ 0.04
SMPD4-219ENST00000491128 GYPCP04921 128 aa15.33■□□□□ 0.04
SMPD4-219ENST00000491128 PLS3P13797 630 aa15.33■□□□□ 0.04
SMPD4-219ENST00000491128 POLGP54098 1239 aaPredicted RBP15.33■□□□□ 0.04
SMPD4-219ENST00000491128 TBX2Q13207 712 aaPredicted RBP15.33■□□□□ 0.04
SMPD4-219ENST00000491128 XKR3Q5GH77 459 aa15.33■□□□□ 0.04
SMPD4-219ENST00000491128 MAMDC4Q6UXC1 1216 aa15.33■□□□□ 0.04
SMPD4-219ENST00000491128 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.33■□□□□ 0.04
SMPD4-219ENST00000491128 KCTD17Q8N5Z5 321 aa15.33■□□□□ 0.04
SMPD4-219ENST00000491128 CRACR2AQ9BSW2 395 aa15.33■□□□□ 0.04
SMPD4-219ENST00000491128 MAF1Q9H063 256 aa15.33■□□□□ 0.04
SMPD4-219ENST00000491128 TRMT1Q9NXH9 659 aaKnown RBP15.33■□□□□ 0.04
SMPD4-219ENST00000491128 KCND2Q9NZV8 630 aa15.33■□□□□ 0.04
SMPD4-219ENST00000491128 IMPACTQ9P2X3 320 aa15.33■□□□□ 0.04
SMPD4-219ENST00000491128 ZNFX1Q9P2E3 1918 aaKnown RBP15.33■□□□□ 0.04
SMPD4-219ENST00000491128 ADGRA3Q8IWK6 1321 aa15.33■□□□□ 0.04
SMPD4-219ENST00000491128 DOCK3Q8IZD9 2030 aa15.33■□□□□ 0.04
SMPD4-219ENST00000491128 USP27XA6NNY8 438 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 LGALS16A8MUM7 142 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 NR3C1P04150 777 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 ZNF286BP0CG31 522 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 MAPK4P31152 587 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 NPTX2P47972 431 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 SYCP1Q15431 976 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 C17orf99Q6UX52 265 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 HAUS6Q7Z4H7 955 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 TC2NQ8N9U0 490 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 SCFD2Q8WU76 684 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 AFG1LQ8WV93 481 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 TINF2Q9BSI4 451 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 AZI2Q9H6S1 392 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 SUGCTQ9HAC7 445 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 IGKV6D-21A0A0A0MT36 114 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 GJB1P08034 283 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 IGBP1P78318 339 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 LRRC71Q8N4P6 559 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 MORC4Q8TE76 937 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 GTPBP4Q9BZE4 634 aaKnown RBP15.32■□□□□ 0.04
SMPD4-219ENST00000491128 KATNBL1Q9H079 304 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 POLR3FQ9H1D9 316 aaPredicted RBP15.32■□□□□ 0.04
SMPD4-219ENST00000491128 MMRN2Q9H8L6 949 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 ADGRA2Q96PE1 1338 aa15.32■□□□□ 0.04
SMPD4-219ENST00000491128 SMPD1P17405 629 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 ARHGAP1Q07960 439 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 KIAA1524Q8TCG1 905 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 NDST4Q9H3R1 872 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 RNPEPQ9H4A4 650 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 RASSF10A6NK89 507 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 EPHB6O15197 1021 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 CAP1Q01518 475 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 EMC2Q15006 297 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms