RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 KIRREL3Q8IZU9 778 aa12.11□□□□□ -0.47
VPS72-205ENST00000491094 SYN2Q92777 582 aaPredicted RBP12.11□□□□□ -0.47
VPS72-205ENST00000491094 ATMINO43313 823 aaPredicted RBP12.11□□□□□ -0.47
VPS72-205ENST00000491094 LRRC14Q15048 493 aa12.11□□□□□ -0.47
VPS72-205ENST00000491094 ARHGEF26Q96DR7 871 aa12.11□□□□□ -0.47
VPS72-205ENST00000491094 SEC16BQ96JE7 1060 aa12.11□□□□□ -0.47
VPS72-205ENST00000491094 KLC4Q9NSK0 619 aa12.11□□□□□ -0.47
VPS72-205ENST00000491094 ABCB11O95342 1321 aa12.11□□□□□ -0.47
VPS72-205ENST00000491094 EML1O00423 815 aa12.11□□□□□ -0.47
VPS72-205ENST00000491094 SLC12A3P55017 1021 aa12.11□□□□□ -0.47
VPS72-205ENST00000491094 CUL1Q13616 776 aa12.11□□□□□ -0.47
VPS72-205ENST00000491094 COBLL1Q53SF7 1204 aa12.11□□□□□ -0.47
VPS72-205ENST00000491094 FAM133BQ5BKY9 247 aaKnown RBP12.11□□□□□ -0.47
VPS72-205ENST00000491094 GPATCH4Q5T3I0 446 aaKnown RBP12.11□□□□□ -0.47
VPS72-205ENST00000491094 CCDC174Q6PII3 467 aa12.11□□□□□ -0.47
VPS72-205ENST00000491094 SCFD2Q8WU76 684 aa12.11□□□□□ -0.47
VPS72-205ENST00000491094 ZNF622Q969S3 477 aaKnown RBP eCLIP12.11□□□□□ -0.472e-12■□□□□ 10.5
VPS72-205ENST00000491094 P2RX7Q99572 595 aaKnown RBP12.11□□□□□ -0.47
VPS72-205ENST00000491094 THAP2Q9H0W7 228 aa12.11□□□□□ -0.47
VPS72-205ENST00000491094 PLCB1Q9NQ66 1216 aa12.11□□□□□ -0.47
VPS72-205ENST00000491094 PCDHA2Q9Y5H9 948 aa12.11□□□□□ -0.47
VPS72-205ENST00000491094 PAPPAQ13219 1627 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 A6NNZ2 444 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 DR1Q01658 176 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 PPP1R7Q15435 360 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 TUBB8Q3ZCM7 444 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 CERKLQ49MI3 558 aaPredicted RBP12.1□□□□□ -0.47
VPS72-205ENST00000491094 CCDC91Q7Z6B0 441 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 GIMAP7Q8NHV1 300 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 SLC35C1Q96A29 364 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 OPLAHO14841 1288 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 GCFC2P16383 781 aaKnown RBP12.1□□□□□ -0.47
VPS72-205ENST00000491094 FGFR4P22455 802 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 SHMT1P34896 483 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 HOXD13P35453 343 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 SNX1Q13596 522 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 NSMFQ6X4W1 530 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 HS2ST1Q7LGA3 356 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 TCP11Q8WWU5 503 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 BTBD6Q96KE9 485 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 ELAC2Q9BQ52 826 aaKnown RBP12.1□□□□□ -0.47
VPS72-205ENST00000491094 ERVK-5Q9HDB9 667 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 SLC40A1Q9NP59 571 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 DBR1Q9UK59 544 aaKnown RBP12.1□□□□□ -0.47
VPS72-205ENST00000491094 DOCK2Q92608 1830 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 IGSF9BQ9UPX0 1349 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 FOXO6A8MYZ6 492 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 TISP43B9A030 160 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 CLTAP09496 248 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 TRIP13Q15645 432 aaPredicted RBP12.1□□□□□ -0.47
VPS72-205ENST00000491094 ODR4Q5SWX8 454 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 GKAP1Q5VSY0 366 aaPredicted RBP12.1□□□□□ -0.47
VPS72-205ENST00000491094 FBXO25Q8TCJ0 367 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 AZI2Q9H6S1 392 aa12.1□□□□□ -0.47
VPS72-205ENST00000491094 BZW2Q9Y6E2 419 aaKnown RBP12.1□□□□□ -0.47
VPS72-205ENST00000491094 UBAP1LF5GYI3 381 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 IFI35P80217 286 aaPredicted RBP12.09□□□□□ -0.47
VPS72-205ENST00000491094 UBAP2Q5T6F2 1119 aaKnown RBP12.09□□□□□ -0.47
VPS72-205ENST00000491094 NT5DC3Q86UY8 548 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 FBXO11Q86XK2 927 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 CERS5Q8N5B7 392 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 C18orf8Q96DM3 657 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 DYDC2Q96IM9 177 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 EIF2AK1Q9BQI3 630 aaKnown RBP12.09□□□□□ -0.47
VPS72-205ENST00000491094 SPATA31A5Q5VU36 1347 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 SPATA31A7Q8IWB4 1347 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 GOLGA6L10A0A0M3HER8 536 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 DNM1LO00429 736 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 SLC29A2Q14542 456 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 EPHA7Q15375 998 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 HIBCHQ6NVY1 386 aaPredicted RBP12.09□□□□□ -0.47
VPS72-205ENST00000491094 FRMD5Q7Z6J6 570 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 FAM178BQ8IXR5 827 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 CCDC105Q8IYK2 499 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 ANKRD42Q8N9B4 389 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 LNX1Q8TBB1 728 aaPredicted RBP12.09□□□□□ -0.47
VPS72-205ENST00000491094 RBM17Q96I25 401 aaKnown RBP12.09□□□□□ -0.47
VPS72-205ENST00000491094 UBE2TQ9NPD8 197 aaPredicted RBP12.09□□□□□ -0.47
VPS72-205ENST00000491094 CASZ1Q86V15 1759 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 RGS16O15492 202 aaPredicted RBP12.09□□□□□ -0.47
VPS72-205ENST00000491094 CPP00450 1065 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 SPATA31C1P0DKV0 1188 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 TNFRSF8P28908 595 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 ECHS1P30084 290 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 MARCKSL1P49006 195 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 CDC42EP5Q6NZY7 148 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 CPNE8Q86YQ8 564 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 SLFN12Q8IYM2 578 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 LRRC57Q8N9N7 239 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 KCNK9Q9NPC2 374 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 FRMD4BQ9Y2L6 1034 aa12.09□□□□□ -0.47
VPS72-205ENST00000491094 GOLGA8IPA6NC78 632 aa12.08□□□□□ -0.47
VPS72-205ENST00000491094 GOLGA8JA6NMD2 632 aa12.08□□□□□ -0.47
VPS72-205ENST00000491094 F5H6K3 240 aa12.08□□□□□ -0.47
VPS72-205ENST00000491094 FOXN3O00409 490 aaPredicted RBP12.08□□□□□ -0.47
VPS72-205ENST00000491094 ICA1Q05084 483 aa12.08□□□□□ -0.47
VPS72-205ENST00000491094 KLRC3Q07444 240 aa12.08□□□□□ -0.47
VPS72-205ENST00000491094 EDRF1Q3B7T1 1238 aa12.08□□□□□ -0.47
VPS72-205ENST00000491094 CBWD6Q4V339 395 aa12.08□□□□□ -0.47
VPS72-205ENST00000491094 CBWD3Q5JTY5 395 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms