RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 PRRC2BQ5JSZ5 2229 aaKnown RBP8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 FAM86C2PA6NEL3 165 aa8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 SPDYE3A6NKU9 549 aa8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 DDX39AO00148 427 aaKnown RBP8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 STAM2O75886 525 aa8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 PFKMP08237 780 aa8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 RFC2P35250 354 aa8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 METAP2P50579 478 aaKnown RBP eCLIP8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 ADCY7P51828 1080 aa8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 WDR5P61964 334 aaKnown RBP8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 ARHGAP4P98171 946 aa8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 FGD1P98174 961 aa8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 TAP1Q03518 808 aa8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 ITGB3BPQ13352 177 aaPredicted RBP8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 RAB30Q15771 203 aa8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 PFKFB3Q16875 520 aaPredicted RBP8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 MARCH8Q5T0T0 291 aa8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 XRRA1Q6P2D8 792 aa8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 SERINC5Q86VE9 423 aa8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 BPHLQ86WA6 291 aaPredicted RBP8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 SEPT1Q8WYJ6 367 aa8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 GPRASP2Q96D09 838 aa8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 MTIF3Q9H2K0 278 aaKnown RBP8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 SLC28A3Q9HAS3 691 aa8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 AGO4Q9HCK5 861 aaKnown RBP8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 KCNH7Q9NS40 1196 aa8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 KAT6AQ92794 2004 aa8.36□□□□□ -1.07
PRPF4B-208ENST00000490653 RSPH10B2B2RC85 870 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 FAM86B1E9PN63 330 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 MEIS1O00470 390 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 PRPF3O43395 683 aaKnown RBP8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 LGR5O75473 907 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 CCNE2O96020 404 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 CHRNA1P02708 482 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 HMGB1P09429 215 aaKnown RBP8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 FAM86B2P0C5J1 330 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 RSPH10BP0C881 870 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 ACTN1P12814 892 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 SCG2P13521 617 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 IGBP1P78318 339 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 KCNMA1Q12791 1236 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 MTMR1Q13613 665 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 PPP2R2DQ66LE6 453 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 CNKSR3Q6P9H4 555 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 PARP9Q8IXQ6 854 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 LINC00528Q8N1L1 170 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 MICALL1Q8N3F8 863 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 LMBR1Q8WVP7 490 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 TRAPPC12Q8WVT3 735 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 ARNTL2Q8WYA1 636 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 GJA10Q969M2 543 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 FAM122AQ96E09 287 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 AIFM3Q96NN9 605 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 C1QTNF2Q9BXJ5 285 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 SLC26A6Q9BXS9 759 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 UPF3BQ9BZI7 483 aaKnown RBP8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 VPS54Q9P1Q0 977 aa8.35□□□□□ -1.07
PRPF4B-208ENST00000490653 TANC1Q9C0D5 1861 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 TCF20Q9UGU0 1960 aaKnown RBP8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 DHX15O43143 795 aaKnown RBP8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 BMP2P12643 396 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 INSRRP14616 1297 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 ATP4AP20648 1035 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 SREBF1P36956 1147 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 ACTR2P61160 394 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 STK3Q13188 491 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 GRB10Q13322 594 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 AGERQ15109 404 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 PLCB4Q15147 1175 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 GRIK4Q16099 956 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 CEP55Q53EZ4 464 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 PLEKHG4Q58EX7 1191 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 RUFY3Q7L099 469 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 PLA2G4DQ86XP0 818 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 FBXL16Q8N461 479 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 CCDC155Q8N6L0 562 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 PHOSPHO2Q8TCD6 241 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 DNAJB3Q8WWF6 145 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 CRYGNQ8WXF5 182 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 SLC9A7Q96T83 725 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 PPP4R2Q9NY27 417 aa8.34□□□□□ -1.07
PRPF4B-208ENST00000490653 IGLV3-22A0A075B6J6 115 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 ABHD14A-ACY1A0A1B0GW23 586 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 BAIAP3O94812 1187 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 UPP2O95045 317 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 REC8O95072 547 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 ATG7O95352 703 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 FOSP01100 380 aaPredicted RBP8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 PSMA5P28066 241 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 ZNF76P36508 570 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 KCNJ6P48051 423 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 GSK3AP49840 483 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 EVCP57679 992 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 MGAT3Q09327 533 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 TMEM62Q0P6H9 643 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 PPFIA1Q13136 1202 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 IKBKEQ14164 716 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 FAM26DQ5JW98 314 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 ABHD15Q6UXT9 468 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms