RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 CEP57Q86XR8 500 aa15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 FAM133AQ8N9E0 248 aa15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 URGCPQ8TCY9 931 aa15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 ZNF653Q96CK0 615 aa15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 PAIP2Q9BPZ3 127 aaKnown RBP15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 MOV10L1Q9BXT6 1211 aaKnown RBP15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 HAUS4Q9H6D7 363 aa15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 FEZ2Q9UHY8 353 aaPredicted RBP15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 FBXO2Q9UK22 296 aaPredicted RBP15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 MED7O43513 233 aa15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 CTDNEP1O95476 244 aa15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 NMT1P30419 496 aaKnown RBP15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 BSPRYQ5W0U4 402 aa15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 PLA2G4FQ68DD2 849 aa15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 TSKSQ9UJT2 592 aa15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 AGO2Q9UKV8 859 aaKnown RBP15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 HBP1O60381 514 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 MXD4Q14582 209 aaPredicted RBP15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 CFAP221Q4G0U5 840 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 CHADLQ6NUI6 762 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 SIX6OS1Q8N1H7 587 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 PROM2Q8N271 834 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 CCDC63Q8NA47 563 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 SREK1Q8WXA9 508 aaKnown RBP15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 TRIM9Q9C026 710 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 ASCC2Q9H1I8 757 aaPredicted RBP15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 GLTPD2A6NH11 291 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 PTPRAP18433 802 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 DSG3P32926 999 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 ELMSAN1Q6PJG2 1045 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 USP49Q70CQ1 688 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 SMC1BQ8NDV3 1235 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 GPRASP2Q96D09 838 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 GOLPH3LQ9H4A5 285 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 ZDHHC9Q9Y397 364 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 KCNK3O14649 394 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 PRKCBP05771 671 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 CDC42EP1Q00587 391 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 OR6B2Q6IFH4 312 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 ZBTB9Q96C00 473 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 BCL9LQ86UU0 1499 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 IRF6O14896 467 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 TUBBP07437 444 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 EVCP57679 992 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 GABPAQ06546 454 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 KRT31Q15323 416 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 NAALADL2Q58DX5 795 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 MOB2Q70IA6 237 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 PDZD4Q76G19 769 aaPredicted RBP15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 LRP10Q7Z4F1 713 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 CCDC89Q8N998 374 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 MAIP1Q8WWC4 291 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 IL17RBQ9NRM6 502 aa15.57■□□□□ 0.08
ARHGEF39-205ENST00000490638 ANXA13P27216 316 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 DEFB115Q30KQ5 88 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 ZNF699Q32M78 642 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 CASC4Q6P4E1 433 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 MAP7D3Q8IWC1 876 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 SCN4BQ8IWT1 228 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 LRRC71Q8N4P6 559 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 RNF139Q8WU17 664 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 ZC3H15Q8WU90 426 aaKnown RBP15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 RBAKQ9NYW8 714 aaPredicted RBP15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 OATP04181 439 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 KCNJ6P48051 423 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 CPT1AP50416 773 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 FAM117BQ6P1L5 589 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 CARD6Q9BX69 1037 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 TYW5A2RUC4 315 aaKnown RBP15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 FOXN1O15353 648 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 GPC3P51654 580 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 ACTR2P61160 394 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 IRX5P78411 483 aaPredicted RBP15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 ZBED6P86452 979 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 THEM5Q8N1Q8 247 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 ZNF710Q8N1W2 664 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 NME8Q8N427 588 aa15.56■□□□□ 0.08
ARHGEF39-205ENST00000490638 A6NJR5 290 aa15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 UPP2O95045 317 aa15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 RPA1P27694 616 aa15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 UAP1Q16222 522 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 LONRF2Q1L5Z9 754 aa15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 TCP11X2Q5H9J9 407 aa15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 FBXO16Q8IX29 292 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 CEP63Q96MT8 703 aa15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 STRNO43815 780 aa15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 TCF7P36402 384 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 UTP11Q9Y3A2 253 aaKnown RBP15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 PRR29P0C7W0 189 aa15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 SLURP2P0DP57 97 aa15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 KCNH2Q12809 1159 aa15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 DNAJC24Q6P3W2 148 aa15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 KIF12Q96FN5 646 aa15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 PDCD2LQ9BRP1 358 aa15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 FAM107BQ9H098 131 aa15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 RIOX1Q9H6W3 641 aa15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 ATP8B3O60423 1300 aa15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 PSMC4P43686 418 aa15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 RBL2Q08999 1139 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms