RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 CRIPAKQ8N1N5 446 aa11.7□□□□□ -0.54
TTC28-207ENST00000490475 RDM1Q8NG50 284 aa11.7□□□□□ -0.54
TTC28-207ENST00000490475 AIFM3Q96NN9 605 aa11.7□□□□□ -0.54
TTC28-207ENST00000490475 RIT2Q99578 217 aa11.7□□□□□ -0.54
TTC28-207ENST00000490475 ELAC1Q9H777 363 aaKnown RBP11.7□□□□□ -0.54
TTC28-207ENST00000490475 RGS18Q9NS28 235 aa11.7□□□□□ -0.54
TTC28-207ENST00000490475 VPS54Q9P1Q0 977 aa11.7□□□□□ -0.54
TTC28-207ENST00000490475 PLAGL2Q9UPG8 496 aa11.7□□□□□ -0.54
TTC28-207ENST00000490475 GRM6O15303 877 aa11.69□□□□□ -0.54
TTC28-207ENST00000490475 LINC00271P0C7V0 271 aa11.69□□□□□ -0.54
TTC28-207ENST00000490475 TMEM62Q0P6H9 643 aa11.69□□□□□ -0.54
TTC28-207ENST00000490475 CTC1Q2NKJ3 1217 aa11.69□□□□□ -0.54
TTC28-207ENST00000490475 METTL13Q8N6R0 699 aa11.69□□□□□ -0.54
TTC28-207ENST00000490475 TRAPPC12Q8WVT3 735 aa11.69□□□□□ -0.54
TTC28-207ENST00000490475 GTF3C6Q969F1 213 aa11.69□□□□□ -0.54
TTC28-207ENST00000490475 TBC1D32Q96NH3 1257 aa11.69□□□□□ -0.54
TTC28-207ENST00000490475 ERVK-5Q9HDB9 667 aa11.69□□□□□ -0.54
TTC28-207ENST00000490475 LIMCH1Q9UPQ0 1083 aa11.69□□□□□ -0.54
TTC28-207ENST00000490475 GINS2Q9Y248 185 aa11.69□□□□□ -0.54
TTC28-207ENST00000490475 WDR81Q562E7 1941 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 H3BQ06 376 aaPredicted RBP11.68□□□□□ -0.54
TTC28-207ENST00000490475 GAS7O60861 476 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 CDKL5O76039 1030 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 DEXIO95424 95 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 C22orf31O95567 290 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 SRGAP2BP0DMP2 458 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 FDPSP14324 419 aaKnown RBP11.68□□□□□ -0.54
TTC28-207ENST00000490475 ZSCAN20P17040 1043 aaPredicted RBP11.68□□□□□ -0.54
TTC28-207ENST00000490475 NLRP5P59047 1200 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 ST3GAL1Q11201 340 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 RABEP1Q15276 862 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 SPOUT1Q5T280 376 aaKnown RBP11.68□□□□□ -0.54
TTC28-207ENST00000490475 MOXD1Q6UVY6 613 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 RTN4RL1Q86UN2 441 aaPredicted RBP11.68□□□□□ -0.54
TTC28-207ENST00000490475 ADHFE1Q8IWW8 467 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 LINC01599Q8WXQ3 324 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 FAM122AQ96E09 287 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 CDCA3Q99618 268 aaPredicted RBP11.68□□□□□ -0.54
TTC28-207ENST00000490475 ADAM2Q99965 735 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 LRFN3Q9BTN0 628 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 TEKT3Q9BXF9 490 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 EPHX3Q9H6B9 360 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 ATP6V0A4Q9HBG4 840 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 DISC1Q9NRI5 854 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 GJB4Q9NTQ9 266 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 TMEM161AQ9NX61 479 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 GABBR1Q9UBS5 961 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 ST3GAL5Q9UNP4 418 aa11.68□□□□□ -0.54
TTC28-207ENST00000490475 MRPL42Q9Y6G3 142 aaKnown RBP11.68□□□□□ -0.54
TTC28-207ENST00000490475 PRR33A8MZF0 331 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 C9IYK1 514 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 JAK2O60674 1132 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 DKC1O60832 514 aaKnown RBP eCLIP11.67□□□□□ -0.54
TTC28-207ENST00000490475 IL9P15248 144 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 XBP1P17861 261 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 LAG3P18627 525 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 PPM1AP35813 382 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 PLA2G5P39877 138 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 DNM2P50570 870 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 HYAL1Q12794 435 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 SMAD4Q13485 552 aaKnown RBP11.67□□□□□ -0.54
TTC28-207ENST00000490475 SMAD2Q15796 467 aaKnown RBP11.67□□□□□ -0.54
TTC28-207ENST00000490475 LRCH2Q5VUJ6 765 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 EXOC8Q8IYI6 725 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 EFHBQ8N7U6 833 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 KLHL23Q8NBE8 558 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 SPPL3Q8TCT6 385 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 RASGRP4Q8TDF6 673 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 JPH2Q9BR39 696 aaPredicted RBP11.67□□□□□ -0.54
TTC28-207ENST00000490475 TMX1Q9H3N1 280 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 ALG13Q9NP73 1137 aaKnown RBP11.67□□□□□ -0.54
TTC28-207ENST00000490475 DACT1Q9NYF0 836 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 ORC3Q9UBD5 711 aaPredicted RBP11.67□□□□□ -0.54
TTC28-207ENST00000490475 PUF60Q9UHX1 559 aaKnown RBP11.67□□□□□ -0.54
TTC28-207ENST00000490475 CD207Q9UJ71 328 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 KCNJ14Q9UNX9 436 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 AKT3Q9Y243 479 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 LZTS1Q9Y250 596 aa11.67□□□□□ -0.54
TTC28-207ENST00000490475 NOC2LQ9Y3T9 749 aaKnown RBP11.67□□□□□ -0.54
TTC28-207ENST00000490475 FNDC1Q4ZHG4 1894 aaPredicted RBP11.67□□□□□ -0.54
TTC28-207ENST00000490475 ZBTB42B2RXF5 422 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 DCXO43602 365 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 GPR32O75388 356 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 CD2BP2O95400 341 aaKnown RBP11.66□□□□□ -0.54
TTC28-207ENST00000490475 OATP04181 439 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 ITGB1P05556 798 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 ATP4AP20648 1035 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 EIF4BP23588 611 aaKnown RBP11.66□□□□□ -0.54
TTC28-207ENST00000490475 NDUFV1P49821 464 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 FAM189BP81408 668 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 ZP2Q05996 745 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 TBC1D8BQ0IIM8 1120 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 ADAM15Q13444 863 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 BMS1Q14692 1282 aaKnown RBP11.66□□□□□ -0.54
TTC28-207ENST00000490475 KIZQ2M2Z5 673 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 TMEM266Q2M3C6 531 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 Q4G0T1 1027 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 PAN2Q504Q3 1202 aaKnown RBP11.66□□□□□ -0.54
TTC28-207ENST00000490475 EFCAB12Q6NXP0 572 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 CCDC83Q8IWF9 413 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms