RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SAPCD2Q86UD0 394 aa5.34□□□□□ -1.55
CD46-216ENST00000490278 ACAP3Q96P50 834 aa5.34□□□□□ -1.55
CD46-216ENST00000490278 MYL10Q9BUA6 226 aa5.34□□□□□ -1.55
CD46-216ENST00000490278 SPATA6Q9NWH7 488 aaPredicted RBP5.34□□□□□ -1.55
CD46-216ENST00000490278 ELL2O00472 640 aaPredicted RBP5.33□□□□□ -1.56
CD46-216ENST00000490278 GABRDO14764 452 aa5.33□□□□□ -1.56
CD46-216ENST00000490278 RPL13P26373 211 aaKnown RBP5.33□□□□□ -1.56
CD46-216ENST00000490278 RAP1GAPP47736 663 aa5.33□□□□□ -1.56
CD46-216ENST00000490278 BCAR1P56945 870 aa5.33□□□□□ -1.56
CD46-216ENST00000490278 SCAND1P57086 179 aa5.33□□□□□ -1.56
CD46-216ENST00000490278 LINC00310P59036 64 aa5.33□□□□□ -1.56
CD46-216ENST00000490278 KLF1Q13351 362 aaPredicted RBP5.33□□□□□ -1.56
CD46-216ENST00000490278 MOGSQ13724 837 aa5.33□□□□□ -1.56
CD46-216ENST00000490278 PRR31Q5SQ13 230 aa5.33□□□□□ -1.56
CD46-216ENST00000490278 ZBTB41Q5SVQ8 909 aa5.33□□□□□ -1.56
CD46-216ENST00000490278 KIAA1841Q6NSI8 718 aa5.33□□□□□ -1.56
CD46-216ENST00000490278 TTLL7Q6ZT98 887 aa5.33□□□□□ -1.56
CD46-216ENST00000490278 CMIPQ8IY22 773 aa5.33□□□□□ -1.56
CD46-216ENST00000490278 LMBR1Q8WVP7 490 aa5.33□□□□□ -1.56
CD46-216ENST00000490278 RPGRQ92834 1020 aaKnown RBP5.33□□□□□ -1.56
CD46-216ENST00000490278 FERMT2Q96AC1 680 aa5.33□□□□□ -1.56
CD46-216ENST00000490278 IRF2BPLQ9H1B7 796 aa5.33□□□□□ -1.56
CD46-216ENST00000490278 WNT8AQ9H1J5 351 aa5.33□□□□□ -1.56
CD46-216ENST00000490278 ST20-MTHFSA0A0A6YYL1 179 aa5.32□□□□□ -1.56
CD46-216ENST00000490278 H0Y858 1186 aa5.32□□□□□ -1.56
CD46-216ENST00000490278 MAFGO15525 162 aa5.32□□□□□ -1.56
CD46-216ENST00000490278 MAFO75444 373 aaPredicted RBP5.32□□□□□ -1.56
CD46-216ENST00000490278 KNG1P01042 644 aa5.32□□□□□ -1.56
CD46-216ENST00000490278 COL6A1P12109 1028 aa5.32□□□□□ -1.56
CD46-216ENST00000490278 MANFP55145 182 aaKnown RBP5.32□□□□□ -1.56
CD46-216ENST00000490278 MLLT6P55198 1093 aaPredicted RBP5.32□□□□□ -1.56
CD46-216ENST00000490278 CD83Q01151 205 aa5.32□□□□□ -1.56
CD46-216ENST00000490278 DLX2Q07687 328 aaPredicted RBP5.32□□□□□ -1.56
CD46-216ENST00000490278 NFATC3Q12968 1075 aa5.32□□□□□ -1.56
CD46-216ENST00000490278 NOLC1Q14978 699 aaKnown RBP eCLIP5.32□□□□□ -1.56
CD46-216ENST00000490278 KCNA10Q16322 511 aa5.32□□□□□ -1.56
CD46-216ENST00000490278 FSCN1Q16658 493 aaKnown RBP5.32□□□□□ -1.56
CD46-216ENST00000490278 INAVAQ3KP66 663 aa5.32□□□□□ -1.56
CD46-216ENST00000490278 WDR72Q3MJ13 1102 aa5.32□□□□□ -1.56
CD46-216ENST00000490278 VWA3BQ502W6 1294 aa5.32□□□□□ -1.56
CD46-216ENST00000490278 KANK2Q63ZY3 851 aa5.32□□□□□ -1.56
CD46-216ENST00000490278 TRMT10BQ6PF06 316 aaKnown RBP5.32□□□□□ -1.56
CD46-216ENST00000490278 UNQ6494/PRO21346Q6UXR6 183 aa5.32□□□□□ -1.56
CD46-216ENST00000490278 CBARPQ8N350 705 aaPredicted RBP5.32□□□□□ -1.56
CD46-216ENST00000490278 DACT3Q96B18 629 aaPredicted RBP5.32□□□□□ -1.56
CD46-216ENST00000490278 SMAD5Q99717 465 aaKnown RBP5.32□□□□□ -1.56
CD46-216ENST00000490278 ANO3Q9BYT9 981 aa5.32□□□□□ -1.56
CD46-216ENST00000490278 NTMQ9P121 344 aa5.32□□□□□ -1.56
CD46-216ENST00000490278 SPEF1Q9Y4P9 236 aa5.32□□□□□ -1.56
CD46-216ENST00000490278 PPP2R3BQ9Y5P8 575 aa5.32□□□□□ -1.56
CD46-216ENST00000490278 SHTN1A0MZ66 631 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 PRSS38A1L453 326 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 SH3D21A4FU49 640 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 NPIPB6E9PJ23 425 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 ALDH1L1O75891 902 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 S100BP04271 92 aaPredicted RBP5.31□□□□□ -1.56
CD46-216ENST00000490278 CLEC2LP0C7M8 214 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 MYBL2P10244 700 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 ZNF28P17035 718 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 ENPP1P22413 925 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 IL13P35225 146 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 IARSP41252 1262 aaKnown RBP5.31□□□□□ -1.56
CD46-216ENST00000490278 GPR3P46089 330 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 MAP3K12Q12852 859 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 UGT8Q16880 541 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 ABCB5Q2M3G0 1257 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 CT83Q5H943 113 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 CCDC62Q6P9F0 684 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 ZNF526Q8TF50 670 aaPredicted RBP5.31□□□□□ -1.56
CD46-216ENST00000490278 ZCCHC14Q8WYQ9 949 aaKnown RBP5.31□□□□□ -1.56
CD46-216ENST00000490278 ORAI2Q96SN7 254 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 MTG2Q9H4K7 406 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 L2HGDHQ9H9P8 463 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 KCMF1Q9P0J7 381 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 FBXO10Q9UK96 956 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 DENND2AQ9ULE3 1009 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 NUMBLQ9Y6R0 609 aa5.31□□□□□ -1.56
CD46-216ENST00000490278 MYPNQ86TC9 1320 aa5.3□□□□□ -1.56
CD46-216ENST00000490278 DDX3XO00571 662 aaKnown RBP eCLIP5.3□□□□□ -1.56
CD46-216ENST00000490278 CFBP00751 764 aa5.3□□□□□ -1.56
CD46-216ENST00000490278 ADCY8P40145 1251 aa5.3□□□□□ -1.56
CD46-216ENST00000490278 AFF3P51826 1226 aaKnown RBP5.3□□□□□ -1.56
CD46-216ENST00000490278 ODR4Q5SWX8 454 aa5.3□□□□□ -1.56
CD46-216ENST00000490278 GRAMD4Q6IC98 578 aa5.3□□□□□ -1.56
CD46-216ENST00000490278 OTOP2Q7RTS6 562 aa5.3□□□□□ -1.56
CD46-216ENST00000490278 TMEM151BQ8IW70 566 aa5.3□□□□□ -1.56
CD46-216ENST00000490278 C1orf162Q8NEQ5 155 aaPredicted RBP5.3□□□□□ -1.56
CD46-216ENST00000490278 TGFBRAP1Q8WUH2 860 aa5.3□□□□□ -1.56
CD46-216ENST00000490278 EAF2Q96CJ1 260 aaPredicted RBP5.3□□□□□ -1.56
CD46-216ENST00000490278 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
CD46-216ENST00000490278 PITHD1Q9GZP4 211 aaPredicted RBP5.3□□□□□ -1.56
CD46-216ENST00000490278 METTL14Q9HCE5 456 aaKnown RBP5.3□□□□□ -1.56
CD46-216ENST00000490278 MKS1Q9NXB0 559 aa5.3□□□□□ -1.56
CD46-216ENST00000490278 FTSJ1Q9UET6 329 aa5.3□□□□□ -1.56
CD46-216ENST00000490278 TNKSO95271 1327 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 A0A0A6YYJ9 748 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 A0A0G2JNJ9 132 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 TRIM75PA6NK02 468 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 FFAR3O14843 346 aa5.29□□□□□ -1.56
CD46-216ENST00000490278 NUAK1O60285 661 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms