RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 TRPM4Q8TD43 1214 aa17.63■□□□□ 0.41
SNX5-214ENST00000490175 DMAC2Q9NW81 257 aa17.63■□□□□ 0.41
SNX5-214ENST00000490175 LARSQ9P2J5 1176 aaKnown RBP17.63■□□□□ 0.41
SNX5-214ENST00000490175 TCEAL9Q9UHQ7 104 aa17.63■□□□□ 0.41
SNX5-214ENST00000490175 TACC1O75410 805 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 MYCLP12524 364 aaPredicted RBP17.62■□□□□ 0.41
SNX5-214ENST00000490175 CASP4P49662 377 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 RARRES1P49788 294 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 HMGCS2P54868 508 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 SUPT20HL1Q3ZLR7 823 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 DCAF17Q5H9S7 520 aaPredicted RBP17.62■□□□□ 0.41
SNX5-214ENST00000490175 DPY19L2P1Q6NXN4 242 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 TMCO3Q6UWJ1 677 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 SLC9A9Q8IVB4 645 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 FAM186BQ8IYM0 893 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 DAW1Q8N136 415 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 TMEM174Q8WUU8 243 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 GPRASP2Q96D09 838 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 PUF60Q9UHX1 559 aaKnown RBP17.62■□□□□ 0.41
SNX5-214ENST00000490175 MYPNQ86TC9 1320 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 WDR64B1ANS9 1081 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 PON1P27169 355 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 BAATQ14032 418 aaPredicted RBP17.62■□□□□ 0.41
SNX5-214ENST00000490175 ASIC2Q16515 512 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 KLHDC7AQ5VTJ3 777 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 SNRNP48Q6IEG0 339 aaKnown RBP17.62■□□□□ 0.41
SNX5-214ENST00000490175 VSIG10LQ86VR7 867 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 AGPAT3Q9NRZ7 376 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 ZNF446Q9NWS9 450 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 GGA3Q9NZ52 723 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 TMOD4Q9NZQ9 345 aa17.62■□□□□ 0.41
SNX5-214ENST00000490175 BZW2Q9Y6E2 419 aaKnown RBP17.62■□□□□ 0.41
SNX5-214ENST00000490175 MACROD2A1Z1Q3 448 aa17.61■□□□□ 0.41
SNX5-214ENST00000490175 ATP1A1P05023 1023 aaKnown RBP17.61■□□□□ 0.41
SNX5-214ENST00000490175 UCHL3P15374 230 aa17.61■□□□□ 0.41
SNX5-214ENST00000490175 PSMC5P62195 406 aa17.61■□□□□ 0.41
SNX5-214ENST00000490175 RAPGEF1Q13905 1077 aa17.61■□□□□ 0.41
SNX5-214ENST00000490175 TCERG1LQ5VWI1 586 aa17.61■□□□□ 0.41
SNX5-214ENST00000490175 CATSPERGQ6ZRH7 1159 aa17.61■□□□□ 0.41
SNX5-214ENST00000490175 RNF10Q8N5U6 811 aaKnown RBP17.61■□□□□ 0.41
SNX5-214ENST00000490175 WNK4Q96J92 1243 aa17.61■□□□□ 0.41
SNX5-214ENST00000490175 RPGRIP1Q96KN7 1286 aa17.61■□□□□ 0.41
SNX5-214ENST00000490175 TMEM206Q9H813 350 aa17.61■□□□□ 0.41
SNX5-214ENST00000490175 ZNF214Q9UL59 606 aaPredicted RBP17.61■□□□□ 0.41
SNX5-214ENST00000490175 FRMD4BQ9Y2L6 1034 aa17.61■□□□□ 0.41
SNX5-214ENST00000490175 JRKLQ9Y4A0 524 aa17.61■□□□□ 0.41
SNX5-214ENST00000490175 RIPK3Q9Y572 518 aa17.61■□□□□ 0.41
SNX5-214ENST00000490175 DUSP10Q9Y6W6 482 aa17.61■□□□□ 0.41
SNX5-214ENST00000490175 ATP8B1O43520 1251 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 TUBBP07437 444 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 ANXA13P27216 316 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 YWHABP31946 246 aaKnown RBP17.6■□□□□ 0.41
SNX5-214ENST00000490175 GFPT1Q06210 699 aaPredicted RBP17.6■□□□□ 0.41
SNX5-214ENST00000490175 PPP2R5AQ15172 486 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 TERF2Q15554 542 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 TAF3Q5VWG9 929 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 NLRX1Q86UT6 975 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 SLC17A8Q8NDX2 589 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 NLGN2Q8NFZ4 835 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 ALS2CR12Q96Q35 445 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 SENP7Q9BQF6 1050 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 PARD6BQ9BYG5 372 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 ANKEF1Q9NU02 776 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 ENC1O14682 589 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 PLS3P13797 630 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 SLC9A1P19634 815 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 LMNB1P20700 586 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 CKAP4Q07065 602 aaKnown RBP17.6■□□□□ 0.41
SNX5-214ENST00000490175 KLHL30Q0D2K2 578 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 SLC18A3Q16572 532 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 PRAMEF18Q5VWM3 479 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 ZNF746Q6NUN9 644 aaPredicted RBP17.6■□□□□ 0.41
SNX5-214ENST00000490175 MSANTD4Q8NCY6 345 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 NSUN6Q8TEA1 469 aaKnown RBP17.6■□□□□ 0.41
SNX5-214ENST00000490175 DRC1Q96MC2 740 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 CCDC43Q96MW1 224 aaKnown RBP17.6■□□□□ 0.41
SNX5-214ENST00000490175 SPAG5Q96R06 1193 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 TEX13BQ9BXU2 312 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 ST6GALNAC4Q9H4F1 302 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 HOXC10Q9NYD6 342 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 DAAM1Q9Y4D1 1078 aa17.6■□□□□ 0.41
SNX5-214ENST00000490175 SSC5DA1L4H1 1573 aa17.59■□□□□ 0.41
SNX5-214ENST00000490175 TESPA1A2RU30 521 aaPredicted RBP17.59■□□□□ 0.41
SNX5-214ENST00000490175 K7ENM7 598 aa17.59■□□□□ 0.41
SNX5-214ENST00000490175 STAM2O75886 525 aa17.59■□□□□ 0.41
SNX5-214ENST00000490175 ZRANB2O95218 330 aaKnown RBP eCLIP17.59■□□□□ 0.419e-6■□□□□ 10.3
SNX5-214ENST00000490175 NR3C2P08235 984 aa17.59■□□□□ 0.41
SNX5-214ENST00000490175 SNRPFP62306 86 aaKnown RBP17.59■□□□□ 0.41
SNX5-214ENST00000490175 BRD3Q15059 726 aa17.59■□□□□ 0.41
SNX5-214ENST00000490175 C10orf76Q5T2E6 689 aa17.59■□□□□ 0.41
SNX5-214ENST00000490175 SYCP3Q8IZU3 236 aa17.59■□□□□ 0.41
SNX5-214ENST00000490175 INPP4AQ96PE3 977 aaPredicted RBP17.59■□□□□ 0.41
SNX5-214ENST00000490175 GCNT4Q9P109 453 aa17.59■□□□□ 0.41
SNX5-214ENST00000490175 AFG3L2Q9Y4W6 797 aa17.59■□□□□ 0.41
SNX5-214ENST00000490175 ATP9AO75110 1047 aa17.59■□□□□ 0.41
SNX5-214ENST00000490175 PRLRP16471 622 aa17.59■□□□□ 0.41
SNX5-214ENST00000490175 APBA1Q02410 837 aa17.59■□□□□ 0.41
SNX5-214ENST00000490175 SH3D19Q5HYK7 790 aa17.59■□□□□ 0.41
SNX5-214ENST00000490175 C12orf56Q8IXR9 622 aa17.59■□□□□ 0.41
SNX5-214ENST00000490175 FAM133AQ8N9E0 248 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms