RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 CYP4A11Q02928 519 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 LRRC24Q50LG9 513 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 ZNF667Q5HYK9 610 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 C4orf22Q6V702 233 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 RPAINQ86UA6 219 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 ZNF408Q9H9D4 720 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 COPEO14579 308 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 SESN3P58005 492 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 XXYLT1Q8NBI6 393 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 DACT3Q96B18 629 aaPredicted RBP9.46□□□□□ -0.89
LSAMP-205ENST00000490035 FAM149B1Q96BN6 582 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 OSBPL5Q9H0X9 879 aaPredicted RBP9.46□□□□□ -0.89
LSAMP-205ENST00000490035 PSMA2P25787 234 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 EEF1DP29692 281 aaKnown RBP9.46□□□□□ -0.9
LSAMP-205ENST00000490035 SYT2Q8N9I0 419 aaPredicted RBP9.46□□□□□ -0.9
LSAMP-205ENST00000490035 TTC8Q8TAM2 541 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 ASPSCR1Q9BZE9 553 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 KDM4CQ9H3R0 1056 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 XAB2Q9HCS7 855 aaKnown RBP9.46□□□□□ -0.9
LSAMP-205ENST00000490035 HGSO14964 777 aaPredicted RBP9.46□□□□□ -0.9
LSAMP-205ENST00000490035 CTIFO43310 598 aaKnown RBP9.46□□□□□ -0.9
LSAMP-205ENST00000490035 OCA2Q04671 838 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 PFKFB3Q16875 520 aaPredicted RBP9.46□□□□□ -0.9
LSAMP-205ENST00000490035 FRA10AC1Q70Z53 315 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 EPM2AIP1Q7L775 607 aaPredicted RBP9.46□□□□□ -0.9
LSAMP-205ENST00000490035 CEP19Q96LK0 163 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 CDHR2Q9BYE9 1310 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 PLS3P13797 630 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 GRAPQ13588 217 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 KIAA1755Q5JYT7 1200 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 ELOA2Q8IYF1 753 aaPredicted RBP9.46□□□□□ -0.9
LSAMP-205ENST00000490035 GRAPLQ8TC17 118 aaPredicted RBP9.46□□□□□ -0.9
LSAMP-205ENST00000490035 ATP6V0A4Q9HBG4 840 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 STAP1Q9ULZ2 295 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 ZBTB5O15062 677 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 LRRN2O75325 713 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 MCF2P10911 925 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 COPS2P61201 443 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 OCRLQ01968 901 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 DYNC1I2Q13409 638 aaKnown RBP9.46□□□□□ -0.9
LSAMP-205ENST00000490035 KCNB1Q14721 858 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 SMYD2Q9NRG4 433 aa9.46□□□□□ -0.9
LSAMP-205ENST00000490035 MORF4L2Q15014 288 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 MIGA2Q7L4E1 593 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 NRKQ7Z2Y5 1582 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 GYG2O15488 501 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 MAPK6Q16659 721 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 FRMD5Q7Z6J6 570 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 FGD4Q96M96 766 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 UIMC1Q96RL1 719 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 PARD6BQ9BYG5 372 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 OLFML3Q9NRN5 406 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 PALD1Q9ULE6 856 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 MBD5Q9P267 1494 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 TCP10L2B9ZVM9 353 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 CLDN3O15551 220 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 SAT1P21673 171 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 OR9Q1Q8NGQ5 310 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 TSSK1BQ9BXA7 367 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 PIK3R2O00459 728 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 STILQ15468 1287 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 SPOPLQ6IQ16 392 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 C17orf53Q8N3J3 647 aaPredicted RBP9.45□□□□□ -0.9
LSAMP-205ENST00000490035 OTUB1Q96FW1 271 aaPredicted RBP9.45□□□□□ -0.9
LSAMP-205ENST00000490035 TRIM54Q9BYV2 358 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 PCDHB8Q9UN66 801 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 ELF1P32519 619 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 SERPINB10P48595 397 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 PRELPP51888 382 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 ELMOD1Q8N336 334 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 BEST2Q8NFU1 509 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 MSTO1Q9BUK6 570 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 VIPAS39Q9H9C1 493 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 NFU1Q9UMS0 254 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 EPHB1P54762 984 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 TSGA10IPQ3SY00 556 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 KCTD16Q68DU8 428 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 TRIM67Q6ZTA4 783 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 PRKAG2Q9UGJ0 569 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 USP32Q8NFA0 1604 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 TOM1L1O75674 476 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 KRT31Q15323 416 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 ANO5Q75V66 913 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 L3MBTL1Q9Y468 752 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 OVOS2A0A0G2JMS6 1433 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 OVOS2A0A0J9YW53 1432 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 OVOS2Q6IE36 1432 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 LRRC23Q53EV4 343 aaPredicted RBP9.45□□□□□ -0.9
LSAMP-205ENST00000490035 C4orf50Q6ZRC1 276 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 TADA2BQ86TJ2 420 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 APOBEC3FQ8IUX4 373 aaKnown RBP9.45□□□□□ -0.9
LSAMP-205ENST00000490035 GUF1Q8N442 669 aaKnown RBP9.45□□□□□ -0.9
LSAMP-205ENST00000490035 FSD1LQ9BXM9 530 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 EHD2Q9NZN4 543 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 SCHIP1Q9P0W5 487 aaPredicted RBP9.45□□□□□ -0.9
LSAMP-205ENST00000490035 ABCC3O15438 1527 aa9.45□□□□□ -0.9
LSAMP-205ENST00000490035 STXBP2Q15833 593 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 MRPL46Q9H2W6 279 aaKnown RBP9.44□□□□□ -0.9
LSAMP-205ENST00000490035 HSPA4LO95757 839 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 EEF1B2P24534 225 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms