RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 TUBGCP5Q96RT8 1024 aa7.43□□□□□ -1.22
CCDC39-206ENST00000489868 PTPN18Q99952 460 aa7.43□□□□□ -1.22
CCDC39-206ENST00000489868 KIAA1683Q9H0B3 1180 aa7.43□□□□□ -1.22
CCDC39-206ENST00000489868 SBNO2Q9Y2G9 1366 aa7.43□□□□□ -1.22
CCDC39-206ENST00000489868 A0A0G2JNJ9 132 aa7.42□□□□□ -1.22
CCDC39-206ENST00000489868 ELL2O00472 640 aaPredicted RBP7.42□□□□□ -1.22
CCDC39-206ENST00000489868 MAFO75444 373 aaPredicted RBP7.42□□□□□ -1.22
CCDC39-206ENST00000489868 HMGCRP04035 888 aa7.42□□□□□ -1.22
CCDC39-206ENST00000489868 ANTXR2P58335 489 aa7.42□□□□□ -1.22
CCDC39-206ENST00000489868 LRRC32Q14392 662 aa7.42□□□□□ -1.22
CCDC39-206ENST00000489868 USP10Q14694 798 aaKnown RBP7.42□□□□□ -1.22
CCDC39-206ENST00000489868 SART3Q15020 963 aaKnown RBP7.42□□□□□ -1.22
CCDC39-206ENST00000489868 TBR1Q16650 682 aa7.42□□□□□ -1.22
CCDC39-206ENST00000489868 ZNF827Q17R98 1081 aa7.42□□□□□ -1.22
CCDC39-206ENST00000489868 UBXN11Q5T124 520 aa7.42□□□□□ -1.22
CCDC39-206ENST00000489868 TRIM68Q6AZZ1 485 aa7.42□□□□□ -1.22
CCDC39-206ENST00000489868 GRAMD4Q6IC98 578 aa7.42□□□□□ -1.22
CCDC39-206ENST00000489868 LHFPL2Q6ZUX7 228 aa7.42□□□□□ -1.22
CCDC39-206ENST00000489868 KANSL1Q7Z3B3 1105 aa7.42□□□□□ -1.22
CCDC39-206ENST00000489868 KRT26Q7Z3Y9 468 aa7.42□□□□□ -1.22
CCDC39-206ENST00000489868 RALYLQ86SE5 291 aaKnown RBP7.42□□□□□ -1.22
CCDC39-206ENST00000489868 MYL10Q9BUA6 226 aa7.42□□□□□ -1.22
CCDC39-206ENST00000489868 CARD11Q9BXL7 1154 aa7.42□□□□□ -1.22
CCDC39-206ENST00000489868 Q9UFV3 132 aa7.42□□□□□ -1.22
CCDC39-206ENST00000489868 CNOT4O95628 575 aaKnown RBP7.41□□□□□ -1.22
CCDC39-206ENST00000489868 EYA4O95677 639 aa7.41□□□□□ -1.22
CCDC39-206ENST00000489868 PHC1P78364 1004 aa7.41□□□□□ -1.22
CCDC39-206ENST00000489868 NME9Q86XW9 330 aa7.41□□□□□ -1.22
CCDC39-206ENST00000489868 C7orf31Q8N865 590 aa7.41□□□□□ -1.22
CCDC39-206ENST00000489868 WDR48Q8TAF3 677 aa7.41□□□□□ -1.22
CCDC39-206ENST00000489868 E2F7Q96AV8 911 aa7.41□□□□□ -1.22
CCDC39-206ENST00000489868 SSBP3Q9BWW4 388 aaPredicted RBP7.41□□□□□ -1.22
CCDC39-206ENST00000489868 MEGF9Q9H1U4 602 aa7.41□□□□□ -1.22
CCDC39-206ENST00000489868 FBXO10Q9UK96 956 aa7.41□□□□□ -1.22
CCDC39-206ENST00000489868 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.41□□□□□ -1.22
CCDC39-206ENST00000489868 SLC4A7Q9Y6M7 1214 aa7.41□□□□□ -1.22
CCDC39-206ENST00000489868 FOXD2O60548 495 aaPredicted RBP7.4□□□□□ -1.22
CCDC39-206ENST00000489868 PRPF6O94906 941 aaKnown RBP7.4□□□□□ -1.22
CCDC39-206ENST00000489868 CLSTN1O94985 981 aa7.4□□□□□ -1.22
CCDC39-206ENST00000489868 CD40P25942 277 aa7.4□□□□□ -1.22
CCDC39-206ENST00000489868 SOX5P35711 763 aa7.4□□□□□ -1.22
CCDC39-206ENST00000489868 ADCY1Q08828 1119 aa7.4□□□□□ -1.22
CCDC39-206ENST00000489868 ATP13A4Q4VNC1 1196 aa7.4□□□□□ -1.22
CCDC39-206ENST00000489868 ZBTB41Q5SVQ8 909 aa7.4□□□□□ -1.22
CCDC39-206ENST00000489868 GPR158Q5T848 1215 aa7.4□□□□□ -1.22
CCDC39-206ENST00000489868 BROXQ5VW32 411 aa7.4□□□□□ -1.22
CCDC39-206ENST00000489868 FILIP1Q7Z7B0 1213 aa7.4□□□□□ -1.22
CCDC39-206ENST00000489868 PHYKPLQ8IUZ5 450 aa7.4□□□□□ -1.22
CCDC39-206ENST00000489868 OR5AN1Q8NGI8 311 aa7.4□□□□□ -1.22
CCDC39-206ENST00000489868 CXorf38Q8TB03 319 aa7.4□□□□□ -1.22
CCDC39-206ENST00000489868 USP7Q93009 1102 aa7.4□□□□□ -1.22
CCDC39-206ENST00000489868 RELTQ969Z4 430 aa7.4□□□□□ -1.22
CCDC39-206ENST00000489868 RBM15Q96T37 977 aaKnown RBP eCLIP7.4□□□□□ -1.22
CCDC39-206ENST00000489868 IFT22Q9H7X7 185 aa7.4□□□□□ -1.22
CCDC39-206ENST00000489868 PPP4R1LQ9P1A2 415 aa7.4□□□□□ -1.22
CCDC39-206ENST00000489868 MSRAQ9UJ68 235 aa7.4□□□□□ -1.22
CCDC39-206ENST00000489868 PRKAB1Q9Y478 270 aa7.4□□□□□ -1.22
CCDC39-206ENST00000489868 LAMTOR5O43504 91 aa7.39□□□□□ -1.23
CCDC39-206ENST00000489868 APOL3O95236 402 aa7.39□□□□□ -1.23
CCDC39-206ENST00000489868 PLATP00750 562 aa7.39□□□□□ -1.23
CCDC39-206ENST00000489868 PPP2CBP62714 309 aa7.39□□□□□ -1.23
CCDC39-206ENST00000489868 PPP2CAP67775 309 aa7.39□□□□□ -1.23
CCDC39-206ENST00000489868 OCRLQ01968 901 aa7.39□□□□□ -1.23
CCDC39-206ENST00000489868 PCOLCEQ15113 449 aa7.39□□□□□ -1.23
CCDC39-206ENST00000489868 DDB1Q16531 1140 aa7.39□□□□□ -1.23
CCDC39-206ENST00000489868 RNF151Q2KHN1 245 aa7.39□□□□□ -1.23
CCDC39-206ENST00000489868 PASD1Q8IV76 773 aa7.39□□□□□ -1.23
CCDC39-206ENST00000489868 ZZZ3Q8IYH5 903 aa7.39□□□□□ -1.23
CCDC39-206ENST00000489868 ZNF610Q8N9Z0 462 aa7.39□□□□□ -1.23
CCDC39-206ENST00000489868 SLC5A5Q92911 643 aa7.39□□□□□ -1.23
CCDC39-206ENST00000489868 TTC1Q99614 292 aa7.39□□□□□ -1.23
CCDC39-206ENST00000489868 BDH2Q9BUT1 245 aa7.39□□□□□ -1.23
CCDC39-206ENST00000489868 MATN2O00339 956 aa7.38□□□□□ -1.23
CCDC39-206ENST00000489868 EPHB4P54760 987 aa7.38□□□□□ -1.23
CCDC39-206ENST00000489868 ADCY2Q08462 1091 aa7.38□□□□□ -1.23
CCDC39-206ENST00000489868 KIAA1841Q6NSI8 718 aa7.38□□□□□ -1.23
CCDC39-206ENST00000489868 LIMS2Q7Z4I7 341 aa7.38□□□□□ -1.23
CCDC39-206ENST00000489868 IFNL2Q8IZJ0 200 aa7.38□□□□□ -1.23
CCDC39-206ENST00000489868 CLRN3Q8NCR9 226 aa7.38□□□□□ -1.23
CCDC39-206ENST00000489868 PITHD1Q9GZP4 211 aaPredicted RBP7.38□□□□□ -1.23
CCDC39-206ENST00000489868 HAPLN2Q9GZV7 340 aa7.38□□□□□ -1.23
CCDC39-206ENST00000489868 MTG2Q9H4K7 406 aa7.38□□□□□ -1.23
CCDC39-206ENST00000489868 ZEB2O60315 1214 aa7.37□□□□□ -1.23
CCDC39-206ENST00000489868 LSP1P33241 339 aa7.37□□□□□ -1.23
CCDC39-206ENST00000489868 MRE11P49959 708 aa7.37□□□□□ -1.23
CCDC39-206ENST00000489868 STAT4Q14765 748 aa7.37□□□□□ -1.23
CCDC39-206ENST00000489868 AGBL4Q5VU57 503 aa7.37□□□□□ -1.23
CCDC39-206ENST00000489868 ARHGEF18Q6ZSZ5 1173 aa7.37□□□□□ -1.23
CCDC39-206ENST00000489868 PLEKHH3Q7Z736 793 aa7.37□□□□□ -1.23
CCDC39-206ENST00000489868 C11orf74Q86VG3 221 aa7.37□□□□□ -1.23
CCDC39-206ENST00000489868 CFHR4Q92496 578 aa7.37□□□□□ -1.23
CCDC39-206ENST00000489868 PRDM12Q9H4Q4 367 aa7.37□□□□□ -1.23
CCDC39-206ENST00000489868 VTA1Q9NP79 307 aa7.37□□□□□ -1.23
CCDC39-206ENST00000489868 KCMF1Q9P0J7 381 aa7.37□□□□□ -1.23
CCDC39-206ENST00000489868 OPHN1O60890 802 aa7.36□□□□□ -1.23
CCDC39-206ENST00000489868 ITGB3P05106 788 aa7.36□□□□□ -1.23
CCDC39-206ENST00000489868 CNGA1P29973 690 aa7.36□□□□□ -1.23
CCDC39-206ENST00000489868 MAP3K12Q12852 859 aa7.36□□□□□ -1.23
CCDC39-206ENST00000489868 PDCD1Q15116 288 aa7.36□□□□□ -1.23
CCDC39-206ENST00000489868 CT47A1Q5JQC4 288 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms