RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 SYNE3Q6ZMZ3 975 aa11.44□□□□□ -0.58
CSF3R-213ENST00000489551 SLC24A5Q71RS6 500 aa11.44□□□□□ -0.58
CSF3R-213ENST00000489551 TRMT1LQ7Z2T5 733 aaKnown RBP11.44□□□□□ -0.58
CSF3R-213ENST00000489551 TEX2Q8IWB9 1127 aa11.44□□□□□ -0.58
CSF3R-213ENST00000489551 ZNF713Q8N859 430 aaPredicted RBP11.44□□□□□ -0.58
CSF3R-213ENST00000489551 COLGALT1Q8NBJ5 622 aa11.44□□□□□ -0.58
CSF3R-213ENST00000489551 RASGRP4Q8TDF6 673 aa11.44□□□□□ -0.58
CSF3R-213ENST00000489551 SUSD6Q92537 303 aa11.44□□□□□ -0.58
CSF3R-213ENST00000489551 TNPO1Q92973 898 aaKnown RBP11.44□□□□□ -0.58
CSF3R-213ENST00000489551 UPF3BQ9BZI7 483 aaKnown RBP11.44□□□□□ -0.58
CSF3R-213ENST00000489551 ZMYND12Q9H0C1 365 aa11.44□□□□□ -0.58
CSF3R-213ENST00000489551 ADAMTS10Q9H324 1103 aa11.44□□□□□ -0.58
CSF3R-213ENST00000489551 PBX3P40426 434 aa11.43□□□□□ -0.58
CSF3R-213ENST00000489551 MRE11P49959 708 aa11.43□□□□□ -0.58
CSF3R-213ENST00000489551 CLCN3P51790 818 aa11.43□□□□□ -0.58
CSF3R-213ENST00000489551 CRYBB1P53674 252 aaPredicted RBP11.43□□□□□ -0.58
CSF3R-213ENST00000489551 NTRK3Q16288 839 aa11.43□□□□□ -0.58
CSF3R-213ENST00000489551 DUSP6Q16828 381 aa11.43□□□□□ -0.58
CSF3R-213ENST00000489551 FAM160B1Q5W0V3 765 aa11.43□□□□□ -0.58
CSF3R-213ENST00000489551 PRSS33Q8NF86 280 aa11.43□□□□□ -0.58
CSF3R-213ENST00000489551 BBXQ8WY36 941 aaPredicted RBP11.43□□□□□ -0.58
CSF3R-213ENST00000489551 KCNB2Q92953 911 aa11.43□□□□□ -0.58
CSF3R-213ENST00000489551 GJA10Q969M2 543 aa11.43□□□□□ -0.58
CSF3R-213ENST00000489551 ZNF668Q96K58 619 aaPredicted RBP11.43□□□□□ -0.58
CSF3R-213ENST00000489551 CASD1Q96PB1 797 aa11.43□□□□□ -0.58
CSF3R-213ENST00000489551 POP1Q99575 1024 aaKnown RBP11.43□□□□□ -0.58
CSF3R-213ENST00000489551 ZNF577Q9BSK1 485 aa11.43□□□□□ -0.58
CSF3R-213ENST00000489551 S1PR5Q9H228 398 aa11.43□□□□□ -0.58
CSF3R-213ENST00000489551 TLE6Q9H808 572 aa11.43□□□□□ -0.58
CSF3R-213ENST00000489551 TLR9Q9NR96 1032 aa11.43□□□□□ -0.58
CSF3R-213ENST00000489551 CDH22Q9UJ99 828 aa11.43□□□□□ -0.58
CSF3R-213ENST00000489551 NID2Q14112 1375 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 C2orf16Q68DN1 1984 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 ESYT2A0FGR8 921 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 DENND3A2RUS2 1198 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 HIDE1A8MVS5 230 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 GPR182O15218 404 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 CIITAP33076 1130 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 RCAN1P53805 252 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 ZXDAP98168 799 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 UBE3AQ05086 875 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 UGCGQ16739 394 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 RNF20Q5VTR2 975 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 ZNF746Q6NUN9 644 aaPredicted RBP11.42□□□□□ -0.58
CSF3R-213ENST00000489551 MIS18BP1Q6P0N0 1132 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 SYCE2Q6PIF2 218 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 TRIM67Q6ZTA4 783 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 BMP8AQ7Z5Y6 402 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 LRRC71Q8N4P6 559 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 PHKBQ93100 1093 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 ELAC1Q9H777 363 aaKnown RBP11.42□□□□□ -0.58
CSF3R-213ENST00000489551 C1orf112Q9NSG2 853 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 TMEM161AQ9NX61 479 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 GABBR1Q9UBS5 961 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 PCDHB12Q9Y5F1 795 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 PLXNA3P51805 1871 aa11.42□□□□□ -0.58
CSF3R-213ENST00000489551 DENND4AQ7Z401 1863 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 TMEM221A6NGB7 291 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 M0R296 226 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 PRPF3O43395 683 aaKnown RBP11.41□□□□□ -0.58
CSF3R-213ENST00000489551 ATF7P17544 494 aaPredicted RBP11.41□□□□□ -0.58
CSF3R-213ENST00000489551 FGFR4P22455 802 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 METAP2P50579 478 aaKnown RBP eCLIP11.41□□□□□ -0.58
CSF3R-213ENST00000489551 NLRP11P59045 1033 aaKnown RBP11.41□□□□□ -0.58
CSF3R-213ENST00000489551 DRP2Q13474 957 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 PRR16Q569H4 304 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 CLLU1OSQ5K130 101 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 SPOUT1Q5T280 376 aaKnown RBP11.41□□□□□ -0.58
CSF3R-213ENST00000489551 PLPP4Q5VZY2 271 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 EFCAB12Q6NXP0 572 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 TMEM184AQ6ZMB5 413 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 Q6ZUG5 572 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 CKAP2LQ8IYA6 745 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 THNSL1Q8IYQ7 743 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 METTL13Q8N6R0 699 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 FEZF2Q8TBJ5 459 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 MICAL1Q8TDZ2 1067 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 BRF1Q92994 677 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 PPP2R3CQ969Q6 453 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 ASIC4Q96FT7 647 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 CEP89Q96ST8 783 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 PHF7Q9BWX1 381 aaPredicted RBP11.41□□□□□ -0.58
CSF3R-213ENST00000489551 GLT8D2Q9H1C3 349 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 KCNH6Q9H252 994 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 ATP6V0A4Q9HBG4 840 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 TBC1D22BQ9NU19 505 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 PCDHA10Q9Y5I2 948 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 CFAP54Q96N23 3096 aa11.41□□□□□ -0.58
CSF3R-213ENST00000489551 MSH4O15457 936 aa11.4□□□□□ -0.58
CSF3R-213ENST00000489551 CSDE1O75534 798 aaKnown RBP11.4□□□□□ -0.58
CSF3R-213ENST00000489551 STBD1O95210 358 aa11.4□□□□□ -0.58
CSF3R-213ENST00000489551 PSAPP07602 524 aa11.4□□□□□ -0.58
CSF3R-213ENST00000489551 PLCB3Q01970 1234 aa11.4□□□□□ -0.58
CSF3R-213ENST00000489551 KCNT2Q6UVM3 1135 aa11.4□□□□□ -0.58
CSF3R-213ENST00000489551 ZNF598Q86UK7 904 aaKnown RBP11.4□□□□□ -0.58
CSF3R-213ENST00000489551 ECHDC2Q86YB7 292 aa11.4□□□□□ -0.58
CSF3R-213ENST00000489551 SMAP1Q8IYB5 467 aaPredicted RBP11.4□□□□□ -0.58
CSF3R-213ENST00000489551 REXO1Q8N1G1 1221 aaKnown RBP11.4□□□□□ -0.58
CSF3R-213ENST00000489551 MRPS27Q92552 414 aaKnown RBP11.4□□□□□ -0.58
CSF3R-213ENST00000489551 RPGRIP1Q96KN7 1286 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms