RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 RFC5P40937 340 aa19.4■□□□□ 0.7
MDC1-206ENST00000489540 PRPHP41219 470 aa19.4■□□□□ 0.7
MDC1-206ENST00000489540 RABGGTBP53611 331 aa19.4■□□□□ 0.7
MDC1-206ENST00000489540 NPEPPSP55786 919 aa19.4■□□□□ 0.7
MDC1-206ENST00000489540 MKRN4PQ13434 485 aaPredicted RBP19.4■□□□□ 0.7
MDC1-206ENST00000489540 KIZQ2M2Z5 673 aa19.4■□□□□ 0.7
MDC1-206ENST00000489540 PLA2G4FQ68DD2 849 aa19.4■□□□□ 0.7
MDC1-206ENST00000489540 SLC7A3Q8WY07 619 aa19.4■□□□□ 0.7
MDC1-206ENST00000489540 SH2D3AQ9BRG2 576 aa19.4■□□□□ 0.7
MDC1-206ENST00000489540 POLR3CQ9BUI4 534 aaPredicted RBP19.4■□□□□ 0.7
MDC1-206ENST00000489540 FTHL17Q9BXU8 183 aa19.4■□□□□ 0.7
MDC1-206ENST00000489540 SEMA6BQ9H3T3 888 aa19.4■□□□□ 0.7
MDC1-206ENST00000489540 AGO3Q9H9G7 860 aaKnown RBP19.4■□□□□ 0.7
MDC1-206ENST00000489540 ANKEF1Q9NU02 776 aa19.4■□□□□ 0.7
MDC1-206ENST00000489540 SCN5AQ14524 2016 aa19.4■□□□□ 0.7
MDC1-206ENST00000489540 VPS37CA5D8V6 355 aaPredicted RBP19.39■□□□□ 0.69
MDC1-206ENST00000489540 SPATA31C1P0DKV0 1188 aa19.39■□□□□ 0.69
MDC1-206ENST00000489540 SYT1P21579 422 aa19.39■□□□□ 0.69
MDC1-206ENST00000489540 CD52P31358 61 aa19.39■□□□□ 0.69
MDC1-206ENST00000489540 DEFB103AP81534 67 aa19.39■□□□□ 0.69
MDC1-206ENST00000489540 PAK2Q13177 524 aa19.39■□□□□ 0.69
MDC1-206ENST00000489540 XKR9Q5GH70 373 aa19.39■□□□□ 0.69
MDC1-206ENST00000489540 DTHD1Q6ZMT9 781 aa19.39■□□□□ 0.69
MDC1-206ENST00000489540 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.39■□□□□ 0.69
MDC1-206ENST00000489540 Q7L0L9 218 aa19.39■□□□□ 0.69
MDC1-206ENST00000489540 CATSPER3Q86XQ3 398 aa19.39■□□□□ 0.69
MDC1-206ENST00000489540 ZBED2Q9BTP6 218 aa19.39■□□□□ 0.69
MDC1-206ENST00000489540 ADAMTS10Q9H324 1103 aa19.39■□□□□ 0.69
MDC1-206ENST00000489540 CDHR5Q9HBB8 845 aa19.39■□□□□ 0.69
MDC1-206ENST00000489540 FOXD4L1Q9NU39 408 aa19.39■□□□□ 0.69
MDC1-206ENST00000489540 PADI3Q9ULW8 664 aa19.39■□□□□ 0.69
MDC1-206ENST00000489540 GPR182O15218 404 aa19.38■□□□□ 0.69
MDC1-206ENST00000489540 RPS6KA5O75582 802 aa19.38■□□□□ 0.69
MDC1-206ENST00000489540 RPA1P27694 616 aa19.38■□□□□ 0.69
MDC1-206ENST00000489540 POLGP54098 1239 aaPredicted RBP19.38■□□□□ 0.69
MDC1-206ENST00000489540 NLRP11P59045 1033 aaKnown RBP19.38■□□□□ 0.69
MDC1-206ENST00000489540 HAUS3Q68CZ6 603 aa19.38■□□□□ 0.69
MDC1-206ENST00000489540 TET1Q8NFU7 2136 aa19.38■□□□□ 0.69
MDC1-206ENST00000489540 DHX33Q9H6R0 707 aaKnown RBP19.38■□□□□ 0.69
MDC1-206ENST00000489540 SLC28A3Q9HAS3 691 aa19.38■□□□□ 0.69
MDC1-206ENST00000489540 MTMR10Q9NXD2 777 aa19.38■□□□□ 0.69
MDC1-206ENST00000489540 SUCLA2Q9P2R7 463 aaPredicted RBP19.38■□□□□ 0.69
MDC1-206ENST00000489540 LRWD1Q9UFC0 647 aa19.38■□□□□ 0.69
MDC1-206ENST00000489540 ENPP3O14638 875 aa19.37■□□□□ 0.69
MDC1-206ENST00000489540 ZBTB39O15060 712 aa19.37■□□□□ 0.69
MDC1-206ENST00000489540 TLL1O43897 1013 aa19.37■□□□□ 0.69
MDC1-206ENST00000489540 GAS2O43903 313 aaKnown RBP19.37■□□□□ 0.69
MDC1-206ENST00000489540 GJB5O95377 273 aa19.37■□□□□ 0.69
MDC1-206ENST00000489540 SLC34A2O95436 690 aa19.37■□□□□ 0.69
MDC1-206ENST00000489540 HSP90AA1P07900 732 aaKnown RBP19.37■□□□□ 0.69
MDC1-206ENST00000489540 PDIA4P13667 645 aaKnown RBP19.37■□□□□ 0.69
MDC1-206ENST00000489540 MUTP22033 750 aa19.37■□□□□ 0.69
MDC1-206ENST00000489540 ATP2C1P98194 919 aaPredicted RBP19.37■□□□□ 0.69
MDC1-206ENST00000489540 MYOCDQ8IZQ8 938 aa19.37■□□□□ 0.69
MDC1-206ENST00000489540 IGSF22Q8N9C0 903 aa19.37■□□□□ 0.69
MDC1-206ENST00000489540 ZNF579Q8NAF0 562 aaKnown RBP19.37■□□□□ 0.69
MDC1-206ENST00000489540 NACC1Q96RE7 527 aa19.37■□□□□ 0.69
MDC1-206ENST00000489540 OSMRQ99650 979 aa19.37■□□□□ 0.69
MDC1-206ENST00000489540 NKX2-4Q9H2Z4 354 aa19.37■□□□□ 0.69
MDC1-206ENST00000489540 TTYH1Q9H313 450 aaPredicted RBP19.37■□□□□ 0.69
MDC1-206ENST00000489540 ZNF576Q9H609 170 aa19.37■□□□□ 0.69
MDC1-206ENST00000489540 YBX2Q9Y2T7 364 aaKnown RBP19.37■□□□□ 0.69
MDC1-206ENST00000489540 NOC2LQ9Y3T9 749 aaKnown RBP19.37■□□□□ 0.69
MDC1-206ENST00000489540 MYH9P35579 1960 aaKnown RBP19.37■□□□□ 0.69
MDC1-206ENST00000489540 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.36■□□□□ 0.69
MDC1-206ENST00000489540 BMP15O95972 392 aa19.36■□□□□ 0.69
MDC1-206ENST00000489540 GPC3P51654 580 aa19.36■□□□□ 0.69
MDC1-206ENST00000489540 NFX1Q12986 1120 aaKnown RBP19.36■□□□□ 0.69
MDC1-206ENST00000489540 DRP2Q13474 957 aa19.36■□□□□ 0.69
MDC1-206ENST00000489540 ARL6IP4Q66PJ3 421 aaKnown RBP19.36■□□□□ 0.69
MDC1-206ENST00000489540 TMEM40Q8WWA1 233 aa19.36■□□□□ 0.69
MDC1-206ENST00000489540 TOP1MTQ969P6 601 aa19.36■□□□□ 0.69
MDC1-206ENST00000489540 CCDC43Q96MW1 224 aaKnown RBP19.36■□□□□ 0.69
MDC1-206ENST00000489540 SCLT1Q96NL6 688 aa19.36■□□□□ 0.69
MDC1-206ENST00000489540 PPP1R16BQ96T49 567 aa19.36■□□□□ 0.69
MDC1-206ENST00000489540 RAD9AQ99638 391 aa19.36■□□□□ 0.69
MDC1-206ENST00000489540 ST3GAL5Q9UNP4 418 aa19.36■□□□□ 0.69
MDC1-206ENST00000489540 MED24O75448 989 aa19.35■□□□□ 0.69
MDC1-206ENST00000489540 MYOGP15173 224 aa19.35■□□□□ 0.69
MDC1-206ENST00000489540 EIF4BP23588 611 aaKnown RBP19.35■□□□□ 0.69
MDC1-206ENST00000489540 FERMT3Q86UX7 667 aa19.35■□□□□ 0.69
MDC1-206ENST00000489540 TCP11Q8WWU5 503 aa19.35■□□□□ 0.69
MDC1-206ENST00000489540 NLRP7Q8WX94 980 aa19.35■□□□□ 0.69
MDC1-206ENST00000489540 FAM161BQ96MY7 647 aa19.35■□□□□ 0.69
MDC1-206ENST00000489540 ERVK-5Q9HDB9 667 aa19.35■□□□□ 0.69
MDC1-206ENST00000489540 INSL6Q9Y581 213 aa19.35■□□□□ 0.69
MDC1-206ENST00000489540 ASAP2O43150 1006 aa19.34■□□□□ 0.69
MDC1-206ENST00000489540 STX6O43752 255 aa19.34■□□□□ 0.69
MDC1-206ENST00000489540 DGAT1O75907 488 aa19.34■□□□□ 0.69
MDC1-206ENST00000489540 DARSP14868 501 aaKnown RBP19.34■□□□□ 0.69
MDC1-206ENST00000489540 CCT6AP40227 531 aaKnown RBP19.34■□□□□ 0.69
MDC1-206ENST00000489540 RARRES1P49788 294 aa19.34■□□□□ 0.69
MDC1-206ENST00000489540 KRT79Q5XKE5 535 aa19.34■□□□□ 0.69
MDC1-206ENST00000489540 TMCO2Q7Z6W1 182 aaPredicted RBP19.34■□□□□ 0.69
MDC1-206ENST00000489540 ZNF410Q86VK4 478 aa19.34■□□□□ 0.69
MDC1-206ENST00000489540 RHPN2Q8IUC4 686 aa19.34■□□□□ 0.69
MDC1-206ENST00000489540 PIGOQ8TEQ8 1089 aa19.34■□□□□ 0.69
MDC1-206ENST00000489540 PSPC1Q8WXF1 523 aaKnown RBP19.34■□□□□ 0.69
MDC1-206ENST00000489540 GCOM2Q9BZD3 368 aaPredicted RBP19.34■□□□□ 0.69
MDC1-206ENST00000489540 DBR1Q9UK59 544 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms