RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 KIZQ2M2Z5 673 aa13.52□□□□□ -0.25
SFXN3-207ENST00000489434 ALYREFQ86V81 257 aaKnown RBP13.52□□□□□ -0.25
SFXN3-207ENST00000489434 ABI1Q8IZP0 508 aa13.52□□□□□ -0.25
SFXN3-207ENST00000489434 BICD2Q8TD16 824 aa13.52□□□□□ -0.25
SFXN3-207ENST00000489434 EDAQ92838 391 aa13.52□□□□□ -0.25
SFXN3-207ENST00000489434 TMEM161AQ9NX61 479 aa13.52□□□□□ -0.25
SFXN3-207ENST00000489434 CLEC1BQ9P126 229 aa13.52□□□□□ -0.25
SFXN3-207ENST00000489434 USP15Q9Y4E8 981 aaPredicted RBP13.52□□□□□ -0.25
SFXN3-207ENST00000489434 SAMM50Q9Y512 469 aa13.52□□□□□ -0.25
SFXN3-207ENST00000489434 PCDHA10Q9Y5I2 948 aa13.52□□□□□ -0.25
SFXN3-207ENST00000489434 FNDC1Q4ZHG4 1894 aaPredicted RBP13.52□□□□□ -0.25
SFXN3-207ENST00000489434 TECTAO75443 2155 aa13.51□□□□□ -0.25
SFXN3-207ENST00000489434 PLXNA4Q9HCM2 1894 aa13.51□□□□□ -0.25
SFXN3-207ENST00000489434 IGLV3-22A0A075B6J6 115 aa13.51□□□□□ -0.25
SFXN3-207ENST00000489434 ESYT2A0FGR8 921 aa13.51□□□□□ -0.25
SFXN3-207ENST00000489434 ZBTB42B2RXF5 422 aa13.51□□□□□ -0.25
SFXN3-207ENST00000489434 DHX15O43143 795 aaKnown RBP13.51□□□□□ -0.25
SFXN3-207ENST00000489434 MGEA5O60502 916 aa13.51□□□□□ -0.25
SFXN3-207ENST00000489434 C22orf31O95567 290 aa13.51□□□□□ -0.25
SFXN3-207ENST00000489434 VTNP04004 478 aa13.51□□□□□ -0.25
SFXN3-207ENST00000489434 FAM102BQ5T8I3 360 aa13.51□□□□□ -0.25
SFXN3-207ENST00000489434 TRMT1LQ7Z2T5 733 aaKnown RBP13.51□□□□□ -0.25
SFXN3-207ENST00000489434 COLGALT1Q8NBJ5 622 aa13.51□□□□□ -0.25
SFXN3-207ENST00000489434 TMEM40Q8WWA1 233 aa13.51□□□□□ -0.25
SFXN3-207ENST00000489434 FBXL18Q96ME1 805 aa13.51□□□□□ -0.25
SFXN3-207ENST00000489434 OSMRQ99650 979 aa13.51□□□□□ -0.25
SFXN3-207ENST00000489434 ZMYND12Q9H0C1 365 aa13.51□□□□□ -0.25
SFXN3-207ENST00000489434 ELAC1Q9H777 363 aaKnown RBP13.51□□□□□ -0.25
SFXN3-207ENST00000489434 CDHR5Q9HBB8 845 aa13.51□□□□□ -0.25
SFXN3-207ENST00000489434 TYW1Q9NV66 732 aaKnown RBP13.51□□□□□ -0.25
SFXN3-207ENST00000489434 BARX2Q9UMQ3 279 aaPredicted RBP13.51□□□□□ -0.25
SFXN3-207ENST00000489434 MAFBQ9Y5Q3 323 aaPredicted RBP13.51□□□□□ -0.25
SFXN3-207ENST00000489434 WDR64B1ANS9 1081 aa13.5□□□□□ -0.25
SFXN3-207ENST00000489434 ZSCAN20P17040 1043 aaPredicted RBP13.5□□□□□ -0.25
SFXN3-207ENST00000489434 CDC27P30260 824 aa13.5□□□□□ -0.25
SFXN3-207ENST00000489434 PPM1AP35813 382 aa13.5□□□□□ -0.25
SFXN3-207ENST00000489434 MRE11P49959 708 aa13.5□□□□□ -0.25
SFXN3-207ENST00000489434 FAM189BP81408 668 aa13.5□□□□□ -0.25
SFXN3-207ENST00000489434 NHLH1Q02575 133 aa13.5□□□□□ -0.25
SFXN3-207ENST00000489434 KRT17Q04695 432 aa13.5□□□□□ -0.25
SFXN3-207ENST00000489434 PRR16Q569H4 304 aa13.5□□□□□ -0.25
SFXN3-207ENST00000489434 SUGP1Q8IWZ8 645 aaKnown RBP13.5□□□□□ -0.25
SFXN3-207ENST00000489434 RASEFQ8IZ41 740 aa13.5□□□□□ -0.25
SFXN3-207ENST00000489434 CRYGNQ8WXF5 182 aa13.5□□□□□ -0.25
SFXN3-207ENST00000489434 SCLT1Q96NL6 688 aa13.5□□□□□ -0.25
SFXN3-207ENST00000489434 PPP1R16BQ96T49 567 aa13.5□□□□□ -0.25
SFXN3-207ENST00000489434 PHF7Q9BWX1 381 aaPredicted RBP13.5□□□□□ -0.25
SFXN3-207ENST00000489434 TMEM117Q9H0C3 514 aa13.5□□□□□ -0.25
SFXN3-207ENST00000489434 NRBP2Q9NSY0 501 aa13.5□□□□□ -0.25
SFXN3-207ENST00000489434 FAM217BQ9NTX9 383 aaPredicted RBP13.5□□□□□ -0.25
SFXN3-207ENST00000489434 AKT3Q9Y243 479 aa13.5□□□□□ -0.25
SFXN3-207ENST00000489434 LZTS1Q9Y250 596 aa13.5□□□□□ -0.25
SFXN3-207ENST00000489434 TMEM221A6NGB7 291 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 LOC730098B7Z3J9 87 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 M0R296 226 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 PER2O15055 1255 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 CDC45O75419 566 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 GLP2RO95838 553 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 FGFR1P11362 822 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 ATF7P17544 494 aaPredicted RBP13.49□□□□□ -0.25
SFXN3-207ENST00000489434 ATP4AP20648 1035 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 ADD1P35611 737 aaKnown RBP13.49□□□□□ -0.25
SFXN3-207ENST00000489434 BMS1Q14692 1282 aaKnown RBP13.49□□□□□ -0.25
SFXN3-207ENST00000489434 DUSP6Q16828 381 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 ADCK5Q3MIX3 580 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 TRIM67Q6ZTA4 783 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 BMP8AQ7Z5Y6 402 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 FAM228AQ86W67 206 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 LRRC43Q8N309 656 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 CCDC148Q8NFR7 591 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 PBXIP1Q96AQ6 731 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 RPGRIP1Q96KN7 1286 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 ZNF558Q96NG5 402 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 PRRX2Q99811 253 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 NGRNQ9NPE2 291 aaKnown RBP13.49□□□□□ -0.25
SFXN3-207ENST00000489434 ENTPD7Q9NQZ7 604 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 GABBR1Q9UBS5 961 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 PCDHGC5Q9Y5F6 944 aa13.49□□□□□ -0.25
SFXN3-207ENST00000489434 PRPF3O43395 683 aaKnown RBP13.48□□□□□ -0.25
SFXN3-207ENST00000489434 GPR32O75388 356 aa13.48□□□□□ -0.25
SFXN3-207ENST00000489434 HOXB8P17481 243 aaPredicted RBP13.48□□□□□ -0.25
SFXN3-207ENST00000489434 EIF4BP23588 611 aaKnown RBP13.48□□□□□ -0.25
SFXN3-207ENST00000489434 CLCN3P51790 818 aa13.48□□□□□ -0.25
SFXN3-207ENST00000489434 NLRP11P59045 1033 aaKnown RBP13.48□□□□□ -0.25
SFXN3-207ENST00000489434 PLCB3Q01970 1234 aa13.48□□□□□ -0.25
SFXN3-207ENST00000489434 APOBRQ0VD83 1088 aa13.48□□□□□ -0.25
SFXN3-207ENST00000489434 DSC3Q14574 896 aa13.48□□□□□ -0.25
SFXN3-207ENST00000489434 CBX2Q14781 532 aaPredicted RBP13.48□□□□□ -0.25
SFXN3-207ENST00000489434 EFCAB12Q6NXP0 572 aa13.48□□□□□ -0.25
SFXN3-207ENST00000489434 CENPQQ7L2Z9 268 aaPredicted RBP13.48□□□□□ -0.25
SFXN3-207ENST00000489434 RNF169Q8NCN4 708 aa13.48□□□□□ -0.25
SFXN3-207ENST00000489434 MRPS27Q92552 414 aaKnown RBP13.48□□□□□ -0.25
SFXN3-207ENST00000489434 TCF25Q9BQ70 676 aa13.48□□□□□ -0.25
SFXN3-207ENST00000489434 DISC1Q9NRI5 854 aa13.48□□□□□ -0.25
SFXN3-207ENST00000489434 GAS7O60861 476 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 OATP04181 439 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 SFNP31947 248 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 CIITAP33076 1130 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 ERVFC1P60507 584 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 ZXDAP98168 799 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms