RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ZC3H18Q86VM9 953 aaKnown RBP18.88■□□□□ 0.61
NPHP4-209ENST00000489180 BSDC1Q9NW68 430 aaPredicted RBP18.88■□□□□ 0.61
NPHP4-209ENST00000489180 NOP53Q9NZM5 478 aaKnown RBP18.88■□□□□ 0.61
NPHP4-209ENST00000489180 ADAM22Q9P0K1 906 aa18.88■□□□□ 0.61
NPHP4-209ENST00000489180 ORC6Q9Y5N6 252 aa18.88■□□□□ 0.61
NPHP4-209ENST00000489180 CCDC195A0A1B0GUA6 201 aa18.88■□□□□ 0.61
NPHP4-209ENST00000489180 PPFIA2O75334 1257 aa18.88■□□□□ 0.61
NPHP4-209ENST00000489180 TXNRD1Q16881 649 aa18.88■□□□□ 0.61
NPHP4-209ENST00000489180 EPM2AIP1Q7L775 607 aaPredicted RBP18.88■□□□□ 0.61
NPHP4-209ENST00000489180 NGRNQ9NPE2 291 aaKnown RBP18.88■□□□□ 0.61
NPHP4-209ENST00000489180 STK36Q9NRP7 1315 aa18.88■□□□□ 0.61
NPHP4-209ENST00000489180 COPEO14579 308 aa18.88■□□□□ 0.61
NPHP4-209ENST00000489180 HSPA4LO95757 839 aa18.88■□□□□ 0.61
NPHP4-209ENST00000489180 PRDX5P30044 214 aa18.88■□□□□ 0.61
NPHP4-209ENST00000489180 MYO1EQ12965 1108 aa18.88■□□□□ 0.61
NPHP4-209ENST00000489180 SHC4Q6S5L8 630 aa18.88■□□□□ 0.61
NPHP4-209ENST00000489180 TRIM67Q6ZTA4 783 aa18.88■□□□□ 0.61
NPHP4-209ENST00000489180 BBS5Q8N3I7 341 aa18.88■□□□□ 0.61
NPHP4-209ENST00000489180 SLC44A5Q8NCS7 719 aa18.88■□□□□ 0.61
NPHP4-209ENST00000489180 RPF1Q9H9Y2 349 aaKnown RBP18.88■□□□□ 0.61
NPHP4-209ENST00000489180 CPSF1Q10570 1443 aaKnown RBP18.88■□□□□ 0.61
NPHP4-209ENST00000489180 POTEB3A0JP26 581 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 POTECB2RU33 542 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 F5H423 210 aaPredicted RBP18.87■□□□□ 0.61
NPHP4-209ENST00000489180 K7ERI5 159 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 BBOX1O75936 387 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 ATXN8OSP0DMR3 200 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 ACTN3Q08043 901 aaPredicted RBP18.87■□□□□ 0.61
NPHP4-209ENST00000489180 ZNF746Q6NUN9 644 aaPredicted RBP18.87■□□□□ 0.61
NPHP4-209ENST00000489180 POTEBQ6S5H4 581 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 CRLF3Q8IUI8 442 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 SMYD3Q9H7B4 428 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 MRFAP1Q9Y605 127 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 WDR17Q8IZU2 1322 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 SYNGAP1Q96PV0 1343 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 SPDYE2BA6NHP3 402 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 DCTN3O75935 186 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 SPDYE6P0CI01 402 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 LRRC14Q15048 493 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 MMS22LQ6ZRQ5 1243 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 METTL23Q86XA0 190 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 THNSL1Q8IYQ7 743 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 UBN1Q9NPG3 1134 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 SCINQ9Y6U3 715 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 EFCAB6Q5THR3 1501 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 NLRP1Q9C000 1473 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 ANO9A1A5B4 782 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 GYG2O15488 501 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 FAM83BQ5T0W9 1011 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 KIF9Q9HAQ2 790 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 DIS3Q9Y2L1 958 aaKnown RBP18.87■□□□□ 0.61
NPHP4-209ENST00000489180 CSPG5O95196 566 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 GPC5P78333 572 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 DPF2Q92785 391 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 WDR24Q96S15 920 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 ADD3Q9UEY8 706 aaKnown RBP18.87■□□□□ 0.61
NPHP4-209ENST00000489180 TMEM94Q12767 1356 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 TTI1O43156 1089 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 FLAD1Q8NFF5 587 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 TRIM55Q9BYV6 548 aa18.87■□□□□ 0.61
NPHP4-209ENST00000489180 HABP4Q5JVS0 413 aaKnown RBP18.86■□□□□ 0.61
NPHP4-209ENST00000489180 CDC26Q8NHZ8 85 aa18.86■□□□□ 0.61
NPHP4-209ENST00000489180 RNF25Q96BH1 459 aaPredicted RBP18.86■□□□□ 0.61
NPHP4-209ENST00000489180 DRC3Q9H069 523 aa18.86■□□□□ 0.61
NPHP4-209ENST00000489180 PDLIM2Q96JY6 352 aa18.86■□□□□ 0.61
NPHP4-209ENST00000489180 ZFP69BQ9UJL9 534 aa18.86■□□□□ 0.61
NPHP4-209ENST00000489180 WDR64B1ANS9 1081 aa18.86■□□□□ 0.61
NPHP4-209ENST00000489180 STAT3P40763 770 aa18.86■□□□□ 0.61
NPHP4-209ENST00000489180 PPP2R2AP63151 447 aa18.86■□□□□ 0.61
NPHP4-209ENST00000489180 PDHA1P08559 390 aa18.86■□□□□ 0.61
NPHP4-209ENST00000489180 ARL4CP56559 192 aa18.86■□□□□ 0.61
NPHP4-209ENST00000489180 OCRLQ01968 901 aa18.86■□□□□ 0.61
NPHP4-209ENST00000489180 NLRP14Q86W24 1093 aa18.86■□□□□ 0.61
NPHP4-209ENST00000489180 DYDC2Q96IM9 177 aa18.86■□□□□ 0.61
NPHP4-209ENST00000489180 NUP85Q9BW27 656 aa18.86■□□□□ 0.61
NPHP4-209ENST00000489180 DCTN4Q9UJW0 460 aa18.86■□□□□ 0.61
NPHP4-209ENST00000489180 PRDM15P57071 1507 aaPredicted RBP18.86■□□□□ 0.61
NPHP4-209ENST00000489180 SMAD1Q15797 465 aaKnown RBP18.85■□□□□ 0.61
NPHP4-209ENST00000489180 TMEM259Q4ZIN3 620 aa18.85■□□□□ 0.61
NPHP4-209ENST00000489180 GMNCA6NCL1 334 aa18.85■□□□□ 0.61
NPHP4-209ENST00000489180 FAM196BA6NMK8 535 aa18.85■□□□□ 0.61
NPHP4-209ENST00000489180 USP17L10C9JJH3 530 aa18.85■□□□□ 0.61
NPHP4-209ENST00000489180 SPAG7O75391 227 aa18.85■□□□□ 0.61
NPHP4-209ENST00000489180 GH2P01242 217 aa18.85■□□□□ 0.61
NPHP4-209ENST00000489180 KPNA2P52292 529 aaKnown RBP18.85■□□□□ 0.61
NPHP4-209ENST00000489180 GRAPQ13588 217 aa18.85■□□□□ 0.61
NPHP4-209ENST00000489180 GRAPLQ8TC17 118 aaPredicted RBP18.85■□□□□ 0.61
NPHP4-209ENST00000489180 CDHR1Q96JP9 859 aa18.85■□□□□ 0.61
NPHP4-209ENST00000489180 SERPINI1Q99574 410 aa18.85■□□□□ 0.61
NPHP4-209ENST00000489180 C11orf70Q9BRQ4 267 aa18.85■□□□□ 0.61
NPHP4-209ENST00000489180 KCNF1Q9H3M0 494 aa18.85■□□□□ 0.61
NPHP4-209ENST00000489180 MBD5Q9P267 1494 aa18.85■□□□□ 0.61
NPHP4-209ENST00000489180 IPO5O00410 1097 aaKnown RBP18.85■□□□□ 0.61
NPHP4-209ENST00000489180 FCER1AP12319 257 aa18.85■□□□□ 0.61
NPHP4-209ENST00000489180 ALCAMQ13740 583 aa18.85■□□□□ 0.61
NPHP4-209ENST00000489180 PLEKHG1Q9ULL1 1385 aa18.85■□□□□ 0.61
NPHP4-209ENST00000489180 ZBTB5O15062 677 aa18.85■□□□□ 0.61
NPHP4-209ENST00000489180 SLC16A4O15374 487 aa18.85■□□□□ 0.61
NPHP4-209ENST00000489180 TBC1D9BQ66K14 1250 aa18.85■□□□□ 0.61
NPHP4-209ENST00000489180 YWHAHQ04917 246 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms