RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 SEPT9Q9UHD8 586 aaPredicted RBP28.11■■■□□ 2.09
HMGN1-217ENST00000489072 DLL1O00548 723 aa28.1■■■□□ 2.09
HMGN1-217ENST00000489072 WNT7AO00755 349 aa28.1■■■□□ 2.09
HMGN1-217ENST00000489072 CRYBB1P53674 252 aaPredicted RBP28.1■■■□□ 2.09
HMGN1-217ENST00000489072 CRIPAKQ8N1N5 446 aa28.1■■■□□ 2.09
HMGN1-217ENST00000489072 ZSCAN31Q96LW9 406 aaPredicted RBP28.1■■■□□ 2.09
HMGN1-217ENST00000489072 SH2D3AQ9BRG2 576 aa28.1■■■□□ 2.09
HMGN1-217ENST00000489072 LLPHQ9BRT6 129 aaKnown RBP28.1■■■□□ 2.09
HMGN1-217ENST00000489072 RALGAPA2Q2PPJ7 1873 aa28.1■■■□□ 2.09
HMGN1-217ENST00000489072 TTC28Q96AY4 2481 aa28.1■■■□□ 2.09
HMGN1-217ENST00000489072 RPS6KA5O75582 802 aa28.09■■■□□ 2.09
HMGN1-217ENST00000489072 GUCY1B3Q02153 619 aa28.09■■■□□ 2.09
HMGN1-217ENST00000489072 NFX1Q12986 1120 aaKnown RBP28.09■■■□□ 2.09
HMGN1-217ENST00000489072 MTERF2Q49AM1 385 aa28.09■■■□□ 2.09
HMGN1-217ENST00000489072 ADAMTS10Q9H324 1103 aa28.09■■■□□ 2.09
HMGN1-217ENST00000489072 AKT3Q9Y243 479 aa28.09■■■□□ 2.09
HMGN1-217ENST00000489072 BRWD1Q9NSI6 2320 aa28.08■■■□□ 2.09
HMGN1-217ENST00000489072 MGEA5O60502 916 aa28.08■■■□□ 2.09
HMGN1-217ENST00000489072 PSMC5P62195 406 aa28.08■■■□□ 2.09
HMGN1-217ENST00000489072 SPIRE1Q08AE8 756 aa28.08■■■□□ 2.09
HMGN1-217ENST00000489072 TBC1D8BQ0IIM8 1120 aa28.08■■■□□ 2.09
HMGN1-217ENST00000489072 EPC2Q52LR7 807 aa28.08■■■□□ 2.09
HMGN1-217ENST00000489072 FAM228AQ86W67 206 aa28.08■■■□□ 2.09
HMGN1-217ENST00000489072 FBXO22Q8NEZ5 403 aa28.08■■■□□ 2.09
HMGN1-217ENST00000489072 ZNF689Q96CS4 500 aaPredicted RBP28.08■■■□□ 2.09
HMGN1-217ENST00000489072 MAP7D2Q96T17 732 aa28.08■■■□□ 2.09
HMGN1-217ENST00000489072 SH2B1Q9NRF2 756 aaPredicted RBP28.08■■■□□ 2.09
HMGN1-217ENST00000489072 ST3GAL5Q9UNP4 418 aa28.08■■■□□ 2.09
HMGN1-217ENST00000489072 DDX11L8A8MPP1 907 aa28.07■■■□□ 2.08
HMGN1-217ENST00000489072 TMOD1P28289 359 aa28.07■■■□□ 2.08
HMGN1-217ENST00000489072 NLRP11P59045 1033 aaKnown RBP28.07■■■□□ 2.08
HMGN1-217ENST00000489072 ANO5Q75V66 913 aa28.07■■■□□ 2.08
HMGN1-217ENST00000489072 WRAP73Q9P2S5 460 aaPredicted RBP28.07■■■□□ 2.08
HMGN1-217ENST00000489072 ADGRA3Q8IWK6 1321 aa28.07■■■□□ 2.08
HMGN1-217ENST00000489072 MARCH6O60337 910 aa28.06■■■□□ 2.08
HMGN1-217ENST00000489072 DGKIO75912 1065 aa28.06■■■□□ 2.08
HMGN1-217ENST00000489072 LINC00271P0C7V0 271 aa28.06■■■□□ 2.08
HMGN1-217ENST00000489072 QARSP47897 775 aaKnown RBP28.06■■■□□ 2.08
HMGN1-217ENST00000489072 DRP2Q13474 957 aa28.06■■■□□ 2.08
HMGN1-217ENST00000489072 NPAS4Q8IUM7 802 aa28.06■■■□□ 2.08
HMGN1-217ENST00000489072 TMEM192Q8IY95 271 aa28.06■■■□□ 2.08
HMGN1-217ENST00000489072 C8orf76Q96K31 380 aa28.06■■■□□ 2.08
HMGN1-217ENST00000489072 ZNF668Q96K58 619 aaPredicted RBP28.06■■■□□ 2.08
HMGN1-217ENST00000489072 SAMD11Q96NU1 681 aa28.06■■■□□ 2.08
HMGN1-217ENST00000489072 COL25A1Q9BXS0 654 aaPredicted RBP28.06■■■□□ 2.08
HMGN1-217ENST00000489072 XIRP2A4UGR9 3374 aa28.06■■■□□ 2.08
HMGN1-217ENST00000489072 RABEP1Q15276 862 aa28.05■■■□□ 2.08
HMGN1-217ENST00000489072 PLA2G4FQ68DD2 849 aa28.05■■■□□ 2.08
HMGN1-217ENST00000489072 NCAPH2Q6IBW4 605 aa28.05■■■□□ 2.08
HMGN1-217ENST00000489072 SLFN12Q8IYM2 578 aa28.05■■■□□ 2.08
HMGN1-217ENST00000489072 FIBCD1Q8N539 461 aa28.05■■■□□ 2.08
HMGN1-217ENST00000489072 LMCD1Q9NZU5 365 aa28.05■■■□□ 2.08
HMGN1-217ENST00000489072 THEGQ9P2T0 379 aa28.05■■■□□ 2.08
HMGN1-217ENST00000489072 MYO7AQ13402 2215 aa28.04■■■□□ 2.08
HMGN1-217ENST00000489072 KIAA1671Q9BY89 1806 aa28.04■■■□□ 2.08
HMGN1-217ENST00000489072 IGKV6-21A0A0C4DH24 114 aa28.04■■■□□ 2.08
HMGN1-217ENST00000489072 GPR182O15218 404 aa28.04■■■□□ 2.08
HMGN1-217ENST00000489072 BAG4O95429 457 aaKnown RBP28.04■■■□□ 2.08
HMGN1-217ENST00000489072 P4HBP07237 508 aaKnown RBP28.04■■■□□ 2.08
HMGN1-217ENST00000489072 GPC3P51654 580 aa28.04■■■□□ 2.08
HMGN1-217ENST00000489072 EPHA7Q15375 998 aa28.04■■■□□ 2.08
HMGN1-217ENST00000489072 ADAM2Q99965 735 aa28.04■■■□□ 2.08
HMGN1-217ENST00000489072 RGL1Q9NZL6 768 aa28.04■■■□□ 2.08
HMGN1-217ENST00000489072 HMGN5P82970 282 aaKnown RBP28.03■■■□□ 2.08
HMGN1-217ENST00000489072 CALCRLQ16602 461 aa28.03■■■□□ 2.08
HMGN1-217ENST00000489072 ODR4Q5SWX8 454 aa28.03■■■□□ 2.08
HMGN1-217ENST00000489072 RGS18Q9NS28 235 aa28.03■■■□□ 2.08
HMGN1-217ENST00000489072 ARID2Q68CP9 1835 aa28.02■■■□□ 2.08
HMGN1-217ENST00000489072 MAFO75444 373 aaPredicted RBP28.02■■■□□ 2.08
HMGN1-217ENST00000489072 SARSP49591 514 aaKnown RBP28.02■■■□□ 2.08
HMGN1-217ENST00000489072 NPEPPSP55786 919 aa28.02■■■□□ 2.08
HMGN1-217ENST00000489072 BTG3Q14201 252 aaPredicted RBP28.02■■■□□ 2.08
HMGN1-217ENST00000489072 DSC3Q14574 896 aa28.02■■■□□ 2.08
HMGN1-217ENST00000489072 SAFBQ15424 915 aaKnown RBP eCLIP28.02■■■□□ 2.08
HMGN1-217ENST00000489072 FAM43BQ6ZT52 329 aaPredicted RBP28.02■■■□□ 2.08
HMGN1-217ENST00000489072 ZNF579Q8NAF0 562 aaKnown RBP28.02■■■□□ 2.08
HMGN1-217ENST00000489072 DYDC2Q96IM9 177 aa28.02■■■□□ 2.08
HMGN1-217ENST00000489072 LXNQ9BS40 222 aa28.02■■■□□ 2.08
HMGN1-217ENST00000489072 FNDC1Q4ZHG4 1894 aaPredicted RBP28.02■■■□□ 2.08
HMGN1-217ENST00000489072 ATG2AQ2TAZ0 1938 aa28.01■■■□□ 2.07
HMGN1-217ENST00000489072 DENND3A2RUS2 1198 aa28.01■■■□□ 2.07
HMGN1-217ENST00000489072 C9IYK1 514 aa28.01■■■□□ 2.07
HMGN1-217ENST00000489072 H3BNC9 293 aa28.01■■■□□ 2.07
HMGN1-217ENST00000489072 NEMFO60524 1076 aa28.01■■■□□ 2.07
HMGN1-217ENST00000489072 STAG3L1P0CL83 205 aa28.01■■■□□ 2.07
HMGN1-217ENST00000489072 IBSPP21815 317 aaPredicted RBP28.01■■■□□ 2.07
HMGN1-217ENST00000489072 EIF4BP23588 611 aaKnown RBP28.01■■■□□ 2.07
HMGN1-217ENST00000489072 GATMP50440 423 aa28.01■■■□□ 2.07
HMGN1-217ENST00000489072 SKIV2LQ15477 1246 aaKnown RBP28.01■■■□□ 2.07
HMGN1-217ENST00000489072 ZNF710Q8N1W2 664 aa28.01■■■□□ 2.07
HMGN1-217ENST00000489072 FBXO18Q8NFZ0 1043 aa28.01■■■□□ 2.07
HMGN1-217ENST00000489072 ATXN2LQ8WWM7 1075 aaKnown RBP28.01■■■□□ 2.07
HMGN1-217ENST00000489072 CLP1Q92989 425 aaKnown RBP28.01■■■□□ 2.07
HMGN1-217ENST00000489072 MTMR9Q96QG7 549 aa28.01■■■□□ 2.07
HMGN1-217ENST00000489072 CYP26B1Q9NR63 512 aa28.01■■■□□ 2.07
HMGN1-217ENST00000489072 DKC1O60832 514 aaKnown RBP eCLIP28■■■□□ 2.07
HMGN1-217ENST00000489072 DARSP14868 501 aaKnown RBP28■■■□□ 2.07
HMGN1-217ENST00000489072 ATP2B1P20020 1258 aa28■■■□□ 2.07
HMGN1-217ENST00000489072 CTNNB1P35222 781 aa28■■■□□ 2.07
HMGN1-217ENST00000489072 CYP4A11Q02928 519 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms