RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ERVK-21P61565 698 aa10.23□□□□□ -0.77
HDAC6-232ENST00000489053 HTRA4P83105 476 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-232ENST00000489053 GRB10Q13322 594 aa10.23□□□□□ -0.77
HDAC6-232ENST00000489053 PPP2R5CQ13362 524 aa10.23□□□□□ -0.77
HDAC6-232ENST00000489053 NPY5RQ15761 445 aa10.23□□□□□ -0.77
HDAC6-232ENST00000489053 UGCGQ16739 394 aa10.23□□□□□ -0.77
HDAC6-232ENST00000489053 POTEDQ86YR6 584 aa10.23□□□□□ -0.77
HDAC6-232ENST00000489053 NPAS4Q8IUM7 802 aa10.23□□□□□ -0.77
HDAC6-232ENST00000489053 ABI1Q8IZP0 508 aa10.23□□□□□ -0.77
HDAC6-232ENST00000489053 MBOAT7Q96N66 472 aa10.23□□□□□ -0.77
HDAC6-232ENST00000489053 GCOM2Q9BZD3 368 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-232ENST00000489053 AGO3Q9H9G7 860 aaKnown RBP10.23□□□□□ -0.77
HDAC6-232ENST00000489053 C1orf112Q9NSG2 853 aa10.23□□□□□ -0.77
HDAC6-232ENST00000489053 PCDHA12Q9UN75 941 aa10.23□□□□□ -0.77
HDAC6-232ENST00000489053 ST3GAL5Q9UNP4 418 aa10.23□□□□□ -0.77
HDAC6-232ENST00000489053 NOC2LQ9Y3T9 749 aaKnown RBP10.23□□□□□ -0.77
HDAC6-232ENST00000489053 ADGRA3Q8IWK6 1321 aa10.23□□□□□ -0.77
HDAC6-232ENST00000489053 EYSQ5T1H1 3165 aa10.23□□□□□ -0.77
HDAC6-232ENST00000489053 TRIP12Q14669 1992 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-232ENST00000489053 ZBTB42B2RXF5 422 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 HOXA2O43364 376 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 ZNF862O60290 1169 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 FDPSP14324 419 aaKnown RBP10.22□□□□□ -0.77
HDAC6-232ENST00000489053 SFPQP23246 707 aaKnown RBP eCLIP10.22□□□□□ -0.77
HDAC6-232ENST00000489053 MCM7P33993 719 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 TXKP42681 527 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 MRPS5P82675 430 aaKnown RBP10.22□□□□□ -0.77
HDAC6-232ENST00000489053 CYP4A11Q02928 519 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 GPM6BQ13491 265 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 EPHA7Q15375 998 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 EPC2Q52LR7 807 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 TJAP1Q5JTD0 557 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 TPH2Q8IWU9 490 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 TMEM192Q8IY95 271 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 RNF169Q8NCN4 708 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 ERMNQ8TAM6 284 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 CEP170P1Q96L14 293 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 ADAM2Q99965 735 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 LXNQ9BS40 222 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 C17orf80Q9BSJ5 609 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 C11orf84Q9BUA3 381 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-232ENST00000489053 INO80BQ9C086 356 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-232ENST00000489053 ZSWIM4Q9H7M6 989 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 ATP6V0A4Q9HBG4 840 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 KCNMB3Q9NPA1 279 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 AAASQ9NRG9 546 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 LMCD1Q9NZU5 365 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 SUCLA2Q9P2R7 463 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-232ENST00000489053 PPME1Q9Y570 386 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 MTCH2Q9Y6C9 303 aa10.22□□□□□ -0.77
HDAC6-232ENST00000489053 KAT6AQ92794 2004 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 FAM205CA6NFA0 338 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 H3BQV1 296 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 ARHGEF15O94989 841 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 EIF4BP23588 611 aaKnown RBP10.21□□□□□ -0.77
HDAC6-232ENST00000489053 YWHABP31946 246 aaKnown RBP10.21□□□□□ -0.77
HDAC6-232ENST00000489053 RFC5P40937 340 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 SARSP49591 514 aaKnown RBP10.21□□□□□ -0.77
HDAC6-232ENST00000489053 MCM2P49736 904 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 PAN2Q504Q3 1202 aaKnown RBP10.21□□□□□ -0.77
HDAC6-232ENST00000489053 TIGD5Q53EQ6 642 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 XKR9Q5GH70 373 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 PLA2G4FQ68DD2 849 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 MCTP1Q6DN14 999 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 EP400NLQ6ZTU2 488 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 SLC24A5Q71RS6 500 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 RHPN2Q8IUC4 686 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 NEK9Q8TD19 979 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 SP7Q8TDD2 431 aaPredicted RBP10.21□□□□□ -0.77
HDAC6-232ENST00000489053 ATXN2LQ8WWM7 1075 aaKnown RBP10.21□□□□□ -0.77
HDAC6-232ENST00000489053 PPP2R3CQ969Q6 453 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 ZNF668Q96K58 619 aaPredicted RBP10.21□□□□□ -0.77
HDAC6-232ENST00000489053 NLRP4Q96MN2 994 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 NIFKQ9BYG3 293 aaKnown RBP10.21□□□□□ -0.77
HDAC6-232ENST00000489053 OSBPL7Q9BZF2 842 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 FOXP1Q9H334 677 aaPredicted RBP10.21□□□□□ -0.77
HDAC6-232ENST00000489053 TTC12Q9H892 705 aaPredicted RBP10.21□□□□□ -0.77
HDAC6-232ENST00000489053 CYP26B1Q9NR63 512 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 VAV3Q9UKW4 847 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 COG5Q9UP83 839 aa10.21□□□□□ -0.77
HDAC6-232ENST00000489053 TET1Q8NFU7 2136 aa10.21□□□□□ -0.78
HDAC6-232ENST00000489053 TTC28Q96AY4 2481 aa10.21□□□□□ -0.78
HDAC6-232ENST00000489053 EPOPA6NHQ4 379 aa10.2□□□□□ -0.78
HDAC6-232ENST00000489053 TBKBP1A7MCY6 615 aa10.2□□□□□ -0.78
HDAC6-232ENST00000489053 EML1O00423 815 aa10.2□□□□□ -0.78
HDAC6-232ENST00000489053 GAS2O43903 313 aaKnown RBP10.2□□□□□ -0.78
HDAC6-232ENST00000489053 MAFO75444 373 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-232ENST00000489053 CSPG5O95196 566 aa10.2□□□□□ -0.78
HDAC6-232ENST00000489053 RB1P06400 928 aa10.2□□□□□ -0.78
HDAC6-232ENST00000489053 NCBP1Q09161 790 aaKnown RBP10.2□□□□□ -0.78
HDAC6-232ENST00000489053 ORC2Q13416 577 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-232ENST00000489053 MYO9BQ13459 2157 aa10.2□□□□□ -0.78
HDAC6-232ENST00000489053 CTTNQ14247 550 aaKnown RBP10.2□□□□□ -0.78
HDAC6-232ENST00000489053 EARS2Q5JPH6 523 aaKnown RBP10.2□□□□□ -0.78
HDAC6-232ENST00000489053 CATSPER4Q7RTX7 472 aa10.2□□□□□ -0.78
HDAC6-232ENST00000489053 ZNF410Q86VK4 478 aa10.2□□□□□ -0.78
HDAC6-232ENST00000489053 FAM228AQ86W67 206 aa10.2□□□□□ -0.78
HDAC6-232ENST00000489053 NOSTRINQ8IVI9 506 aa10.2□□□□□ -0.78
HDAC6-232ENST00000489053 CMTR2Q8IYT2 770 aaKnown RBP10.2□□□□□ -0.78
HDAC6-232ENST00000489053 TCP11Q8WWU5 503 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms