RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 AGXT2Q9BYV1 514 aa20.87■□□□□ 0.93
HDAC6-231ENST00000488905 CEP131Q9UPN4 1083 aa20.87■□□□□ 0.93
HDAC6-231ENST00000488905 PCDHA10Q9Y5I2 948 aa20.87■□□□□ 0.93
HDAC6-231ENST00000488905 TBKBP1A7MCY6 615 aa20.86■□□□□ 0.93
HDAC6-231ENST00000488905 C9IYK1 514 aa20.86■□□□□ 0.93
HDAC6-231ENST00000488905 VTNP04004 478 aa20.86■□□□□ 0.93
HDAC6-231ENST00000488905 RPS6KB1P23443 525 aa20.86■□□□□ 0.93
HDAC6-231ENST00000488905 CIITAP33076 1130 aa20.86■□□□□ 0.93
HDAC6-231ENST00000488905 CRYBB1P53674 252 aaPredicted RBP20.86■□□□□ 0.93
HDAC6-231ENST00000488905 AKAP17AQ02040 695 aaKnown RBP20.86■□□□□ 0.93
HDAC6-231ENST00000488905 TRMT1LQ7Z2T5 733 aaKnown RBP20.86■□□□□ 0.93
HDAC6-231ENST00000488905 METTL13Q8N6R0 699 aa20.86■□□□□ 0.93
HDAC6-231ENST00000488905 EFHBQ8N7U6 833 aa20.86■□□□□ 0.93
HDAC6-231ENST00000488905 MSLNLQ96KJ4 702 aa20.86■□□□□ 0.93
HDAC6-231ENST00000488905 FAM167AQ96KS9 214 aa20.86■□□□□ 0.93
HDAC6-231ENST00000488905 RNF26Q9BY78 433 aaPredicted RBP20.86■□□□□ 0.93
HDAC6-231ENST00000488905 GABBR1Q9UBS5 961 aa20.86■□□□□ 0.93
HDAC6-231ENST00000488905 WDR64B1ANS9 1081 aa20.85■□□□□ 0.93
HDAC6-231ENST00000488905 PPFIA3O75145 1194 aa20.85■□□□□ 0.93
HDAC6-231ENST00000488905 GPR32O75388 356 aa20.85■□□□□ 0.93
HDAC6-231ENST00000488905 HOXD11P31277 338 aaPredicted RBP20.85■□□□□ 0.93
HDAC6-231ENST00000488905 NRIP1P48552 1158 aa20.85■□□□□ 0.93
HDAC6-231ENST00000488905 CLCN3P51790 818 aa20.85■□□□□ 0.93
HDAC6-231ENST00000488905 NTRK3Q16288 839 aa20.85■□□□□ 0.93
HDAC6-231ENST00000488905 CSPP1Q1MSJ5 1256 aa20.85■□□□□ 0.93
HDAC6-231ENST00000488905 SPOUT1Q5T280 376 aaKnown RBP20.85■□□□□ 0.93
HDAC6-231ENST00000488905 FAM102BQ5T8I3 360 aa20.85■□□□□ 0.93
HDAC6-231ENST00000488905 UPF3BQ9BZI7 483 aaKnown RBP20.85■□□□□ 0.93
HDAC6-231ENST00000488905 AAASQ9NRG9 546 aa20.85■□□□□ 0.93
HDAC6-231ENST00000488905 SAMM50Q9Y512 469 aa20.85■□□□□ 0.93
HDAC6-231ENST00000488905 PCDHB12Q9Y5F1 795 aa20.85■□□□□ 0.93
HDAC6-231ENST00000488905 PCDHGC5Q9Y5F6 944 aa20.85■□□□□ 0.93
HDAC6-231ENST00000488905 TECTAO75443 2155 aa20.85■□□□□ 0.93
HDAC6-231ENST00000488905 EYA4O95677 639 aa20.84■□□□□ 0.93
HDAC6-231ENST00000488905 GLP2RO95838 553 aa20.84■□□□□ 0.93
HDAC6-231ENST00000488905 UBE3AQ05086 875 aa20.84■□□□□ 0.93
HDAC6-231ENST00000488905 LINC01465Q8N7H1 131 aa20.84■□□□□ 0.93
HDAC6-231ENST00000488905 SMRP1Q8NCR6 262 aa20.84■□□□□ 0.93
HDAC6-231ENST00000488905 SLC26A6Q9BXS9 759 aa20.84■□□□□ 0.93
HDAC6-231ENST00000488905 TLR9Q9NR96 1032 aa20.84■□□□□ 0.93
HDAC6-231ENST00000488905 TMEM161AQ9NX61 479 aa20.84■□□□□ 0.93
HDAC6-231ENST00000488905 CLEC1BQ9P126 229 aa20.84■□□□□ 0.93
HDAC6-231ENST00000488905 VPS54Q9P1Q0 977 aa20.84■□□□□ 0.93
HDAC6-231ENST00000488905 HCSTQ9UBK5 93 aa20.84■□□□□ 0.93
HDAC6-231ENST00000488905 MAGEB2O15479 319 aa20.83■□□□□ 0.93
HDAC6-231ENST00000488905 FGFR1P11362 822 aa20.83■□□□□ 0.93
HDAC6-231ENST00000488905 IFNAR1P17181 557 aa20.83■□□□□ 0.93
HDAC6-231ENST00000488905 DSC3Q14574 896 aa20.83■□□□□ 0.93
HDAC6-231ENST00000488905 RBM23Q86U06 439 aaKnown RBP20.83■□□□□ 0.93
HDAC6-231ENST00000488905 COLGALT1Q8NBJ5 622 aa20.83■□□□□ 0.93
HDAC6-231ENST00000488905 MAP7D2Q96T17 732 aa20.83■□□□□ 0.93
HDAC6-231ENST00000488905 ELAC1Q9H777 363 aaKnown RBP20.83■□□□□ 0.93
HDAC6-231ENST00000488905 ATP6V0A4Q9HBG4 840 aa20.83■□□□□ 0.93
HDAC6-231ENST00000488905 AKT3Q9Y243 479 aa20.83■□□□□ 0.93
HDAC6-231ENST00000488905 MSH4O15457 936 aa20.82■□□□□ 0.92
HDAC6-231ENST00000488905 ZNF862O60290 1169 aa20.82■□□□□ 0.92
HDAC6-231ENST00000488905 FGF18O76093 207 aa20.82■□□□□ 0.92
HDAC6-231ENST00000488905 OATP04181 439 aa20.82■□□□□ 0.92
HDAC6-231ENST00000488905 PSMA5P28066 241 aa20.82■□□□□ 0.92
HDAC6-231ENST00000488905 PRKCEQ02156 737 aa20.82■□□□□ 0.92
HDAC6-231ENST00000488905 COASYQ13057 564 aa20.82■□□□□ 0.92
HDAC6-231ENST00000488905 THNSL1Q8IYQ7 743 aa20.82■□□□□ 0.92
HDAC6-231ENST00000488905 LRRC71Q8N4P6 559 aa20.82■□□□□ 0.92
HDAC6-231ENST00000488905 NCOA5Q9HCD5 579 aaKnown RBP20.82■□□□□ 0.92
HDAC6-231ENST00000488905 DISC1Q9NRI5 854 aa20.82■□□□□ 0.92
HDAC6-231ENST00000488905 TYW1Q9NV66 732 aaKnown RBP20.82■□□□□ 0.92
HDAC6-231ENST00000488905 BARX2Q9UMQ3 279 aaPredicted RBP20.82■□□□□ 0.92
HDAC6-231ENST00000488905 LAG3P18627 525 aa20.81■□□□□ 0.92
HDAC6-231ENST00000488905 TMOD1P28289 359 aa20.81■□□□□ 0.92
HDAC6-231ENST00000488905 NLRP11P59045 1033 aaKnown RBP20.81■□□□□ 0.92
HDAC6-231ENST00000488905 FAM189BP81408 668 aa20.81■□□□□ 0.92
HDAC6-231ENST00000488905 HERC4Q5GLZ8 1057 aaPredicted RBP20.81■□□□□ 0.92
HDAC6-231ENST00000488905 EFCAB12Q6NXP0 572 aa20.81■□□□□ 0.92
HDAC6-231ENST00000488905 CCDC136Q96JN2 1154 aa20.81■□□□□ 0.92
HDAC6-231ENST00000488905 RIT2Q99578 217 aa20.81■□□□□ 0.92
HDAC6-231ENST00000488905 CWH43Q9H720 699 aa20.81■□□□□ 0.92
HDAC6-231ENST00000488905 MUTYHQ9UIF7 546 aa20.81■□□□□ 0.92
HDAC6-231ENST00000488905 FSD2A1L4K1 749 aa20.8■□□□□ 0.92
HDAC6-231ENST00000488905 CHMP2AO43633 222 aa20.8■□□□□ 0.92
HDAC6-231ENST00000488905 EDIL3O43854 480 aa20.8■□□□□ 0.92
HDAC6-231ENST00000488905 GAS7O60861 476 aa20.8■□□□□ 0.92
HDAC6-231ENST00000488905 REC8O95072 547 aa20.8■□□□□ 0.92
HDAC6-231ENST00000488905 PDIA3P30101 505 aaKnown RBP20.8■□□□□ 0.92
HDAC6-231ENST00000488905 EVCP57679 992 aa20.8■□□□□ 0.92
HDAC6-231ENST00000488905 CCT2P78371 535 aaKnown RBP20.8■□□□□ 0.92
HDAC6-231ENST00000488905 UGCGQ16739 394 aa20.8■□□□□ 0.92
HDAC6-231ENST00000488905 RNF135Q8IUD6 432 aa20.8■□□□□ 0.92
HDAC6-231ENST00000488905 ZNF710Q8N1W2 664 aa20.8■□□□□ 0.92
HDAC6-231ENST00000488905 MICAL1Q8TDZ2 1067 aa20.8■□□□□ 0.92
HDAC6-231ENST00000488905 TMEM117Q9H0C3 514 aa20.8■□□□□ 0.92
HDAC6-231ENST00000488905 ADAMTS10Q9H324 1103 aa20.8■□□□□ 0.92
HDAC6-231ENST00000488905 TLE6Q9H808 572 aa20.8■□□□□ 0.92
HDAC6-231ENST00000488905 SH3GLB2Q9NR46 395 aa20.8■□□□□ 0.92
HDAC6-231ENST00000488905 HOXA2O43364 376 aa20.79■□□□□ 0.92
HDAC6-231ENST00000488905 EIF4BP23588 611 aaKnown RBP20.79■□□□□ 0.92
HDAC6-231ENST00000488905 SFNP31947 248 aa20.79■□□□□ 0.92
HDAC6-231ENST00000488905 USP11P51784 963 aa20.79■□□□□ 0.92
HDAC6-231ENST00000488905 JAK3P52333 1124 aa20.79■□□□□ 0.92
HDAC6-231ENST00000488905 LRCH2Q5VUJ6 765 aa20.79■□□□□ 0.92
HDAC6-231ENST00000488905 LRRC43Q8N309 656 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms