RNA–Protein interactions for RNA: ENST00000488121.1

COL1A2-209, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 380 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-209ENST00000488121 HDAC6Q9UBN7 1215 aa12.72□□□□□ -0.37
COL1A2-209ENST00000488121 PHF24Q9UPV7 400 aa12.72□□□□□ -0.37
COL1A2-209ENST00000488121 COL1A2P08123 1366 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 NPHP3-ACAD11A0A0J9YXS1 232 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 USO1O60763 962 aaKnown RBP12.71□□□□□ -0.37
COL1A2-209ENST00000488121 MAFO75444 373 aaPredicted RBP12.71□□□□□ -0.37
COL1A2-209ENST00000488121 LETM1O95202 739 aaPredicted RBP12.71□□□□□ -0.37
COL1A2-209ENST00000488121 DNM2P50570 870 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 RAD51AP2Q09MP3 1159 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 PNOCQ13519 176 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 ITGA7Q13683 1181 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 GIT2Q14161 759 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 GRIK4Q16099 956 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 FAM47CQ5HY64 1035 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 MAEAQ7L5Y9 396 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 RETREG2Q8NC44 543 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 MCPH1Q8NEM0 835 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 PPP1R13LQ8WUF5 828 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 TRAPPC12Q8WVT3 735 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 CCDC47Q96A33 483 aaKnown RBP12.71□□□□□ -0.37
COL1A2-209ENST00000488121 CEP89Q96ST8 783 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 RUSC1Q9BVN2 902 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 TIPINQ9BVW5 301 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 TRIM9Q9C026 710 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 SUGCTQ9HAC7 445 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 POLD4Q9HCU8 107 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 STARD7Q9NQZ5 370 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 TMEM63CQ9P1W3 806 aa12.71□□□□□ -0.37
COL1A2-209ENST00000488121 A0A1W2PQ45 241 aaPredicted RBP12.7□□□□□ -0.38
COL1A2-209ENST00000488121 A0A1W2PQY0 241 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 C17orf102A2RUQ5 167 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 ZBTB42B2RXF5 422 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 IDEP14735 1019 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 GUCY2CP25092 1073 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 CASP1P29466 404 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 ASIC1P78348 528 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 DPYDQ12882 1025 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 FAM102BQ5T8I3 360 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 EFCAB12Q6NXP0 572 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 CNNM4Q6P4Q7 775 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 NFRKBQ6P4R8 1299 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 MTHFD1LQ6UB35 978 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 CCDC65Q8IXS2 484 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 METTL13Q8N6R0 699 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 ANKLE1Q8NAG6 615 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 ERCC4Q92889 916 aaPredicted RBP12.7□□□□□ -0.38
COL1A2-209ENST00000488121 SMARCE1Q969G3 411 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 SEZ6LQ9BYH1 1024 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 SENP6Q9GZR1 1112 aaPredicted RBP12.7□□□□□ -0.38
COL1A2-209ENST00000488121 ZHX3Q9H4I2 956 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 DHX33Q9H6R0 707 aaKnown RBP12.7□□□□□ -0.38
COL1A2-209ENST00000488121 ATP6V0A4Q9HBG4 840 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 PDLIM7Q9NR12 457 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 PANK4Q9NVE7 773 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 KIAA1468Q9P260 1216 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 PCDHA5Q9Y5H7 936 aa12.7□□□□□ -0.38
COL1A2-209ENST00000488121 GRIN2DO15399 1336 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 LOXHD1Q8IVV2 1947 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 PVALEFA0A1B0GWK0 134 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 SFI1A8K8P3 1242 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 HIP1RO75146 1068 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 TBCAO75347 108 aaKnown RBP12.69□□□□□ -0.38
COL1A2-209ENST00000488121 FAM13AO94988 1023 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 RPN1P04843 607 aaKnown RBP12.69□□□□□ -0.38
COL1A2-209ENST00000488121 PRR29P0C7W0 189 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 TMOD1P28289 359 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 PTPN11Q06124 597 aaPredicted RBP12.69□□□□□ -0.38
COL1A2-209ENST00000488121 EMC2Q15006 297 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 MARCH8Q5T0T0 291 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 IER5Q5VY09 327 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 MYCT1Q8N699 235 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 LMBR1Q8WVP7 490 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 TCP11Q8WWU5 503 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 TMEM143Q96AN5 459 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 DNAJC19Q96DA6 116 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 GSDMAQ96QA5 445 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 REEP2Q9BRK0 252 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 GTF2IRD1Q9UHL9 959 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 KCNG1Q9UIX4 513 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 ODF2LQ9ULJ1 636 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 PCDHA2Q9Y5H9 948 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 COL4A3BPQ9Y5P4 624 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 KAT6AQ92794 2004 aa12.69□□□□□ -0.38
COL1A2-209ENST00000488121 IGKV6-21A0A0C4DH24 114 aa12.68□□□□□ -0.38
COL1A2-209ENST00000488121 A0A0U1RQG5 324 aaPredicted RBP12.68□□□□□ -0.38
COL1A2-209ENST00000488121 ARVCFO00192 962 aa12.68□□□□□ -0.38
COL1A2-209ENST00000488121 GAS2O43903 313 aaKnown RBP12.68□□□□□ -0.38
COL1A2-209ENST00000488121 C22orf31O95567 290 aa12.68□□□□□ -0.38
COL1A2-209ENST00000488121 SARSP49591 514 aaKnown RBP12.68□□□□□ -0.38
COL1A2-209ENST00000488121 ZNF200P98182 395 aaPredicted RBP12.68□□□□□ -0.38
COL1A2-209ENST00000488121 HERC4Q5GLZ8 1057 aaPredicted RBP12.68□□□□□ -0.38
COL1A2-209ENST00000488121 UNC13DQ70J99 1090 aa12.68□□□□□ -0.38
COL1A2-209ENST00000488121 SESTD1Q86VW0 696 aa12.68□□□□□ -0.38
COL1A2-209ENST00000488121 KIFAP3Q92845 792 aa12.68□□□□□ -0.38
COL1A2-209ENST00000488121 DRC1Q96MC2 740 aa12.68□□□□□ -0.38
COL1A2-209ENST00000488121 XPNPEP1Q9NQW7 623 aa12.68□□□□□ -0.38
COL1A2-209ENST00000488121 RMND1Q9NWS8 449 aa12.68□□□□□ -0.38
COL1A2-209ENST00000488121 SUCLA2Q9P2R7 463 aaPredicted RBP12.68□□□□□ -0.38
COL1A2-209ENST00000488121 TUBE1Q9UJT0 475 aa12.68□□□□□ -0.38
COL1A2-209ENST00000488121 FRMPD3Q5JV73 1810 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms