RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 CRLF3Q8IUI8 442 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 ANTXR1Q9H6X2 564 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 ATP6V0A4Q9HBG4 840 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 M0QYV0 167 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 PHKA2P46019 1235 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 TMPRSS15P98073 1019 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 RMDN1Q96DB5 314 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 FAM213AQ9BRX8 229 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 TOPORSQ9NS56 1045 aaPredicted RBP16.4■□□□□ 0.22
PKD1-220ENST00000487932 MID2Q9UJV3 735 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 NOVA2Q9UNW9 492 aaKnown RBP16.4■□□□□ 0.22
PKD1-220ENST00000487932 FAM196BA6NMK8 535 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 CDK8P49336 464 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 PI16Q6UXB8 463 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 TRIML2Q8N7C3 387 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 RMDN3Q96TC7 470 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 CUEDC2Q9H467 287 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 BCL2L12Q9HB09 334 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 PCSK1NQ9UHG2 260 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 TTC8Q8TAM2 541 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 CCHCR1Q8TD31 782 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 AK8Q96MA6 479 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 MAN1B1Q9UKM7 699 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 GCFC2P16383 781 aaKnown RBP16.4■□□□□ 0.22
PKD1-220ENST00000487932 UBE3CQ15386 1083 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 PPP1R13BQ96KQ4 1090 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 STX18Q9P2W9 335 aaKnown RBP16.4■□□□□ 0.22
PKD1-220ENST00000487932 MYBP10242 640 aa16.39■□□□□ 0.22
PKD1-220ENST00000487932 UBE3AQ05086 875 aa16.39■□□□□ 0.22
PKD1-220ENST00000487932 MAPK6Q16659 721 aa16.39■□□□□ 0.22
PKD1-220ENST00000487932 ANKRD40Q6AI12 368 aa16.39■□□□□ 0.22
PKD1-220ENST00000487932 GLYCTKQ8IVS8 523 aa16.39■□□□□ 0.22
PKD1-220ENST00000487932 BHMT2Q9H2M3 363 aa16.39■□□□□ 0.22
PKD1-220ENST00000487932 PCDHA13Q9Y5I0 950 aa16.39■□□□□ 0.22
PKD1-220ENST00000487932 CA4P22748 312 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 CENPAP49450 140 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 RBM6P78332 1123 aaKnown RBP16.39■□□□□ 0.21
PKD1-220ENST00000487932 PDIK1LQ8N165 341 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 PCP11498 1178 aaKnown RBP16.39■□□□□ 0.21
PKD1-220ENST00000487932 LCP1P13796 627 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 ANKS3Q6ZW76 656 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 CATSPER3Q86XQ3 398 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 FOXP1Q9H334 677 aaPredicted RBP16.39■□□□□ 0.21
PKD1-220ENST00000487932 SOWAHDA6NJG2 315 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 GRIK1P39086 918 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 POLE2P56282 527 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 FKBP3Q00688 224 aaKnown RBP16.39■□□□□ 0.21
PKD1-220ENST00000487932 HIF1AQ16665 826 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 TADA2BQ86TJ2 420 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 SMAP1Q8IYB5 467 aaPredicted RBP16.39■□□□□ 0.21
PKD1-220ENST00000487932 IL17REQ8NFR9 667 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 ING2Q9H160 280 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 ZSWIM6Q9HCJ5 1215 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 SPDYE5A6NIY4 337 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 EFCAB14O75071 495 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 TJP3O95049 919 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 SPDYE7PQ495Y7 208 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 DDIASQ8IXT1 998 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 ATXN7L3BQ96GX2 97 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 GPATCH8Q9UKJ3 1502 aaKnown RBP16.39■□□□□ 0.21
PKD1-220ENST00000487932 TNFAIP2Q03169 654 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 PPP1R36Q96LQ0 422 aa16.39■□□□□ 0.21
PKD1-220ENST00000487932 TTC7AQ9ULT0 858 aaPredicted RBP16.39■□□□□ 0.21
PKD1-220ENST00000487932 PNMA6FA0A0J9YX94 578 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 COPEO14579 308 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 SERPING1P05155 500 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 HMBSP08397 361 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 VEPH1Q14D04 833 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 PROSER3Q2NL68 480 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 PPP1R2P3Q6NXS1 205 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 TMEM270Q6UE05 265 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 PATL1Q86TB9 770 aaKnown RBP16.38■□□□□ 0.21
PKD1-220ENST00000487932 MARCH10Q8NA82 808 aaPredicted RBP16.38■□□□□ 0.21
PKD1-220ENST00000487932 SCG3Q8WXD2 468 aaKnown RBP16.38■□□□□ 0.21
PKD1-220ENST00000487932 USP44Q9H0E7 712 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 TDRD3Q9H7E2 651 aaKnown RBP16.38■□□□□ 0.21
PKD1-220ENST00000487932 ANAPC7Q9UJX3 599 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 UBE4BO95155 1302 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 ZC3H4Q9UPT8 1303 aaKnown RBP16.38■□□□□ 0.21
PKD1-220ENST00000487932 KCNJ6P48051 423 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 MYO1DO94832 1006 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 MCF2P10911 925 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 NUDT18Q6ZVK8 323 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 AGR3Q8TD06 166 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 SPATA33Q96N06 139 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.38■□□□□ 0.21
PKD1-220ENST00000487932 TM6SF1Q9BZW5 370 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 ZNF302Q9NR11 478 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 SELENONQ9NZV5 590 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 PPARGC1AQ9UBK2 798 aaKnown RBP16.38■□□□□ 0.21
PKD1-220ENST00000487932 TRAPPC8Q9Y2L5 1435 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 SLC16A4O15374 487 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 COPS2P61201 443 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 TJAP1Q5JTD0 557 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 RAD18Q9NS91 495 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 MTMR6Q9Y217 621 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 SCINQ9Y6U3 715 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 ATP10DQ9P241 1426 aa16.38■□□□□ 0.21
PKD1-220ENST00000487932 SH3RF3Q8TEJ3 882 aaPredicted RBP16.38■□□□□ 0.21
PKD1-220ENST00000487932 CHAMP1Q96JM3 812 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms