RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 PDCD1Q15116 288 aa7.37□□□□□ -1.23
USP48-209ENST00000487880 PRAMEF9Q5VWM5 478 aa7.37□□□□□ -1.23
USP48-209ENST00000487880 KIAA1841Q6NSI8 718 aa7.37□□□□□ -1.23
USP48-209ENST00000487880 TIGD7Q6NT04 549 aaPredicted RBP7.37□□□□□ -1.23
USP48-209ENST00000487880 CXorf67Q86X51 503 aaPredicted RBP7.37□□□□□ -1.23
USP48-209ENST00000487880 NOC2LQ9Y3T9 749 aaKnown RBP7.37□□□□□ -1.23
USP48-209ENST00000487880 RAB11FIP3O75154 756 aa7.36□□□□□ -1.23
USP48-209ENST00000487880 MANFP55145 182 aaKnown RBP7.36□□□□□ -1.23
USP48-209ENST00000487880 ADCY2Q08462 1091 aa7.36□□□□□ -1.23
USP48-209ENST00000487880 VMACQ2NL98 169 aa7.36□□□□□ -1.23
USP48-209ENST00000487880 FAM26FQ5R3K3 315 aa7.36□□□□□ -1.23
USP48-209ENST00000487880 ZBTB41Q5SVQ8 909 aa7.36□□□□□ -1.23
USP48-209ENST00000487880 TMEM200BQ69YZ2 307 aa7.36□□□□□ -1.23
USP48-209ENST00000487880 UNQ6494/PRO21346Q6UXR6 183 aa7.36□□□□□ -1.23
USP48-209ENST00000487880 ESPNLQ6ZVH7 1005 aa7.36□□□□□ -1.23
USP48-209ENST00000487880 ZNF761Q86XN6 746 aaPredicted RBP7.36□□□□□ -1.23
USP48-209ENST00000487880 NUDT10Q8NFP7 164 aa7.36□□□□□ -1.23
USP48-209ENST00000487880 ADAMTS17Q8TE56 1095 aa7.36□□□□□ -1.23
USP48-209ENST00000487880 NUDT11Q96G61 164 aa7.36□□□□□ -1.23
USP48-209ENST00000487880 SPATA25Q9BR10 227 aa7.36□□□□□ -1.23
USP48-209ENST00000487880 MENTQ9BUN1 341 aa7.36□□□□□ -1.23
USP48-209ENST00000487880 PITHD1Q9GZP4 211 aaPredicted RBP7.36□□□□□ -1.23
USP48-209ENST00000487880 L2HGDHQ9H9P8 463 aa7.36□□□□□ -1.23
USP48-209ENST00000487880 TYW1Q9NV66 732 aaKnown RBP7.36□□□□□ -1.23
USP48-209ENST00000487880 FBXO10Q9UK96 956 aa7.36□□□□□ -1.23
USP48-209ENST00000487880 SLURP1P55000 103 aa7.35□□□□□ -1.23
USP48-209ENST00000487880 BCAR1P56945 870 aa7.35□□□□□ -1.23
USP48-209ENST00000487880 NFATC3Q12968 1075 aa7.35□□□□□ -1.23
USP48-209ENST00000487880 TOP3AQ13472 1001 aaPredicted RBP7.35□□□□□ -1.23
USP48-209ENST00000487880 MTMR1Q13613 665 aa7.35□□□□□ -1.23
USP48-209ENST00000487880 NOLC1Q14978 699 aaKnown RBP eCLIP7.35□□□□□ -1.23
USP48-209ENST00000487880 WDR72Q3MJ13 1102 aa7.35□□□□□ -1.23
USP48-209ENST00000487880 BCL6BQ8N143 479 aaPredicted RBP7.35□□□□□ -1.23
USP48-209ENST00000487880 CNTD1Q8N815 330 aa7.35□□□□□ -1.23
USP48-209ENST00000487880 STAG1Q8WVM7 1258 aa7.35□□□□□ -1.23
USP48-209ENST00000487880 HAPLN2Q9GZV7 340 aa7.35□□□□□ -1.23
USP48-209ENST00000487880 WNT8AQ9H1J5 351 aa7.35□□□□□ -1.23
USP48-209ENST00000487880 KCMF1Q9P0J7 381 aa7.35□□□□□ -1.23
USP48-209ENST00000487880 FTSJ1Q9UET6 329 aa7.35□□□□□ -1.23
USP48-209ENST00000487880 DENND2AQ9ULE3 1009 aa7.35□□□□□ -1.23
USP48-209ENST00000487880 PPP2R3BQ9Y5P8 575 aa7.35□□□□□ -1.23
USP48-209ENST00000487880 C9orf118A6NHY6 69 aa7.34□□□□□ -1.23
USP48-209ENST00000487880 PFKMP08237 780 aa7.34□□□□□ -1.23
USP48-209ENST00000487880 POLD1P28340 1107 aa7.34□□□□□ -1.23
USP48-209ENST00000487880 ETV4P43268 484 aa7.34□□□□□ -1.23
USP48-209ENST00000487880 FAM50AQ14320 339 aaKnown RBP7.34□□□□□ -1.23
USP48-209ENST00000487880 EIF4HQ15056 248 aaKnown RBP7.34□□□□□ -1.23
USP48-209ENST00000487880 GRAMD4Q6IC98 578 aa7.34□□□□□ -1.23
USP48-209ENST00000487880 Q6ZUG5 572 aa7.34□□□□□ -1.23
USP48-209ENST00000487880 TXNDC5Q8NBS9 432 aaKnown RBP7.34□□□□□ -1.23
USP48-209ENST00000487880 OR5AN1Q8NGI8 311 aa7.34□□□□□ -1.23
USP48-209ENST00000487880 WDR48Q8TAF3 677 aa7.34□□□□□ -1.23
USP48-209ENST00000487880 LMBR1Q8WVP7 490 aa7.34□□□□□ -1.23
USP48-209ENST00000487880 MBD6Q96DN6 1003 aa7.34□□□□□ -1.23
USP48-209ENST00000487880 AHCYL2Q96HN2 611 aaKnown RBP7.34□□□□□ -1.23
USP48-209ENST00000487880 ORAI2Q96SN7 254 aa7.34□□□□□ -1.23
USP48-209ENST00000487880 KATNBL1Q9H079 304 aa7.34□□□□□ -1.23
USP48-209ENST00000487880 HOMER2Q9NSB8 354 aa7.34□□□□□ -1.23
USP48-209ENST00000487880 TMPRSS11EQ9UL52 423 aa7.34□□□□□ -1.23
USP48-209ENST00000487880 WASHC2CQ9Y4E1 1318 aa7.33□□□□□ -1.24
USP48-209ENST00000487880 A0A0A6YYJ9 748 aa7.33□□□□□ -1.24
USP48-209ENST00000487880 PRSS38A1L453 326 aa7.33□□□□□ -1.24
USP48-209ENST00000487880 CUTAO60888 179 aa7.33□□□□□ -1.24
USP48-209ENST00000487880 KATNA1O75449 491 aa7.33□□□□□ -1.24
USP48-209ENST00000487880 ADCY8P40145 1251 aa7.33□□□□□ -1.24
USP48-209ENST00000487880 MAP3K12Q12852 859 aa7.33□□□□□ -1.24
USP48-209ENST00000487880 INAVAQ3KP66 663 aa7.33□□□□□ -1.24
USP48-209ENST00000487880 MCTP2Q6DN12 878 aa7.33□□□□□ -1.24
USP48-209ENST00000487880 REXO1L1PQ8IX06 675 aa7.33□□□□□ -1.24
USP48-209ENST00000487880 CMIPQ8IY22 773 aa7.33□□□□□ -1.24
USP48-209ENST00000487880 CBARPQ8N350 705 aaPredicted RBP7.33□□□□□ -1.24
USP48-209ENST00000487880 ZSCAN18Q8TBC5 510 aaPredicted RBP7.33□□□□□ -1.24
USP48-209ENST00000487880 RPGRQ92834 1020 aaKnown RBP7.33□□□□□ -1.24
USP48-209ENST00000487880 AJUBAQ96IF1 538 aa7.33□□□□□ -1.24
USP48-209ENST00000487880 ACAP3Q96P50 834 aa7.33□□□□□ -1.24
USP48-209ENST00000487880 TMEM168Q9H0V1 697 aa7.33□□□□□ -1.24
USP48-209ENST00000487880 MTG2Q9H4K7 406 aa7.33□□□□□ -1.24
USP48-209ENST00000487880 LUC7LQ9NQ29 371 aaKnown RBP7.33□□□□□ -1.24
USP48-209ENST00000487880 C14orf119Q9NWQ9 140 aa7.33□□□□□ -1.24
USP48-209ENST00000487880 DDX56Q9NY93 547 aaKnown RBP7.33□□□□□ -1.24
USP48-209ENST00000487880 A0A0G2JNJ9 132 aa7.32□□□□□ -1.24
USP48-209ENST00000487880 TRIM13O60858 407 aa7.32□□□□□ -1.24
USP48-209ENST00000487880 OPHN1O60890 802 aa7.32□□□□□ -1.24
USP48-209ENST00000487880 APOL3O95236 402 aa7.32□□□□□ -1.24
USP48-209ENST00000487880 FSCN1Q16658 493 aaKnown RBP7.32□□□□□ -1.24
USP48-209ENST00000487880 BRDTQ58F21 947 aaPredicted RBP7.32□□□□□ -1.24
USP48-209ENST00000487880 SYDE2Q5VT97 1194 aa7.32□□□□□ -1.24
USP48-209ENST00000487880 BMP8AQ7Z5Y6 402 aa7.32□□□□□ -1.24
USP48-209ENST00000487880 LYSMD2Q8IV50 215 aa7.32□□□□□ -1.24
USP48-209ENST00000487880 ANKRD13AQ8IZ07 590 aa7.32□□□□□ -1.24
USP48-209ENST00000487880 KLHL36Q8N4N3 616 aa7.32□□□□□ -1.24
USP48-209ENST00000487880 FERMT2Q96AC1 680 aa7.32□□□□□ -1.24
USP48-209ENST00000487880 ASPSCR1Q9BZE9 553 aa7.32□□□□□ -1.24
USP48-209ENST00000487880 Q9UFV3 132 aa7.32□□□□□ -1.24
USP48-209ENST00000487880 ADAM29Q9UKF5 820 aa7.32□□□□□ -1.24
USP48-209ENST00000487880 NUMBLQ9Y6R0 609 aa7.32□□□□□ -1.24
USP48-209ENST00000487880 NOBOXO60393 691 aa7.31□□□□□ -1.24
USP48-209ENST00000487880 ENPP1P22413 925 aa7.31□□□□□ -1.24
USP48-209ENST00000487880 CSF2RBP32927 897 aa7.31□□□□□ -1.24
USP48-209ENST00000487880 JAG1P78504 1218 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms