RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 ZNF365Q70YC5 407 aa13.03□□□□□ -0.32
CLIP2-207ENST00000487447 TPH2Q8IWU9 490 aa13.03□□□□□ -0.32
CLIP2-207ENST00000487447 EXOC8Q8IYI6 725 aa13.03□□□□□ -0.32
CLIP2-207ENST00000487447 ZNF579Q8NAF0 562 aaKnown RBP13.03□□□□□ -0.32
CLIP2-207ENST00000487447 HERVK_113Q902F9 699 aa13.03□□□□□ -0.32
CLIP2-207ENST00000487447 JPH2Q9BR39 696 aaPredicted RBP13.03□□□□□ -0.32
CLIP2-207ENST00000487447 FBXO2Q9UK22 296 aaPredicted RBP13.03□□□□□ -0.32
CLIP2-207ENST00000487447 TRPV2Q9Y5S1 764 aa13.03□□□□□ -0.32
CLIP2-207ENST00000487447 CDY2AQ9Y6F7 541 aa13.03□□□□□ -0.32
CLIP2-207ENST00000487447 GBF1Q92538 1859 aa13.02□□□□□ -0.32
CLIP2-207ENST00000487447 VWA3AA6NCI4 1184 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 PP2D1A8MPX8 630 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 ZBTB39O15060 712 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 BAIAP3O94812 1187 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 YEATS4O95619 227 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 CTSHP09668 335 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 ACRP10323 421 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 LONP1P36776 959 aaKnown RBP13.02□□□□□ -0.33
CLIP2-207ENST00000487447 ECM1Q16610 540 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 FBXO47Q5MNV8 452 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 FAM109BQ6ICB4 259 aaPredicted RBP13.02□□□□□ -0.33
CLIP2-207ENST00000487447 EFCAB12Q6NXP0 572 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 CNKSR3Q6P9H4 555 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 POTEGQ6S5H5 508 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 USP38Q8NB14 1042 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 SPRYD3Q8NCJ5 442 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 SNX29Q8TEQ0 813 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 CEP170P1Q96L14 293 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 NACC1Q96RE7 527 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 CELF4Q9BZC1 486 aaKnown RBP13.02□□□□□ -0.33
CLIP2-207ENST00000487447 OSBPL7Q9BZF2 842 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 FAM49AQ9H0Q0 323 aaPredicted RBP13.02□□□□□ -0.33
CLIP2-207ENST00000487447 SRPRBQ9Y5M8 271 aaKnown RBP13.02□□□□□ -0.33
CLIP2-207ENST00000487447 CUL9Q8IWT3 2517 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 COL4A6Q14031 1691 aa13.02□□□□□ -0.33
CLIP2-207ENST00000487447 GPR32O75388 356 aa13.01□□□□□ -0.33
CLIP2-207ENST00000487447 FGBP02675 491 aa13.01□□□□□ -0.33
CLIP2-207ENST00000487447 TMOD1P28289 359 aa13.01□□□□□ -0.33
CLIP2-207ENST00000487447 CLCN3P51790 818 aa13.01□□□□□ -0.33
CLIP2-207ENST00000487447 GRIN1Q05586 938 aa13.01□□□□□ -0.33
CLIP2-207ENST00000487447 DRP2Q13474 957 aa13.01□□□□□ -0.33
CLIP2-207ENST00000487447 LPIN1Q14693 890 aa13.01□□□□□ -0.33
CLIP2-207ENST00000487447 TCTN1Q2MV58 587 aa13.01□□□□□ -0.33
CLIP2-207ENST00000487447 KRT79Q5XKE5 535 aa13.01□□□□□ -0.33
CLIP2-207ENST00000487447 TSHZ1Q6ZSZ6 1077 aa13.01□□□□□ -0.33
CLIP2-207ENST00000487447 TRMT1LQ7Z2T5 733 aaKnown RBP13.01□□□□□ -0.33
CLIP2-207ENST00000487447 LRRC71Q8N4P6 559 aa13.01□□□□□ -0.33
CLIP2-207ENST00000487447 LINC00301Q8NCQ3 95 aa13.01□□□□□ -0.33
CLIP2-207ENST00000487447 SLC7A3Q8WY07 619 aa13.01□□□□□ -0.33
CLIP2-207ENST00000487447 ZNF396Q96N95 335 aaPredicted RBP13.01□□□□□ -0.33
CLIP2-207ENST00000487447 PNMA5Q96PV4 448 aa13.01□□□□□ -0.33
CLIP2-207ENST00000487447 SH2D3AQ9BRG2 576 aa13.01□□□□□ -0.33
CLIP2-207ENST00000487447 ADAMTS10Q9H324 1103 aa13.01□□□□□ -0.33
CLIP2-207ENST00000487447 XPNPEP1Q9NQW7 623 aa13.01□□□□□ -0.33
CLIP2-207ENST00000487447 PPP6R2O75170 966 aa13□□□□□ -0.33
CLIP2-207ENST00000487447 DGAT1O75907 488 aa13□□□□□ -0.33
CLIP2-207ENST00000487447 ACTN1P12814 892 aa13□□□□□ -0.33
CLIP2-207ENST00000487447 CCT6AP40227 531 aaKnown RBP13□□□□□ -0.33
CLIP2-207ENST00000487447 GPC3P51654 580 aa13□□□□□ -0.33
CLIP2-207ENST00000487447 CRYBB1P53674 252 aaPredicted RBP13□□□□□ -0.33
CLIP2-207ENST00000487447 CDC42EP1Q00587 391 aa13□□□□□ -0.33
CLIP2-207ENST00000487447 TMEM119Q4V9L6 283 aa13□□□□□ -0.33
CLIP2-207ENST00000487447 XKR9Q5GH70 373 aa13□□□□□ -0.33
CLIP2-207ENST00000487447 ZNF697Q5TEC3 545 aa13□□□□□ -0.33
CLIP2-207ENST00000487447 DEFB128Q7Z7B8 93 aa13□□□□□ -0.33
CLIP2-207ENST00000487447 METTL13Q8N6R0 699 aa13□□□□□ -0.33
CLIP2-207ENST00000487447 PIGOQ8TEQ8 1089 aa13□□□□□ -0.33
CLIP2-207ENST00000487447 APBB2Q92870 758 aa13□□□□□ -0.33
CLIP2-207ENST00000487447 MAP7D2Q96T17 732 aa13□□□□□ -0.33
CLIP2-207ENST00000487447 CCSER1Q9C0I3 900 aa13□□□□□ -0.33
CLIP2-207ENST00000487447 CXXC1Q9P0U4 656 aaPredicted RBP13□□□□□ -0.33
CLIP2-207ENST00000487447 A0A0C4DFX4 3053 aa13□□□□□ -0.33
CLIP2-207ENST00000487447 ABHD14A-ACY1A0A1B0GW23 586 aa12.99□□□□□ -0.33
CLIP2-207ENST00000487447 M0QZ92 97 aa12.99□□□□□ -0.33
CLIP2-207ENST00000487447 EFCAB14O75071 495 aa12.99□□□□□ -0.33
CLIP2-207ENST00000487447 EYA4O95677 639 aa12.99□□□□□ -0.33
CLIP2-207ENST00000487447 VTNP04004 478 aa12.99□□□□□ -0.33
CLIP2-207ENST00000487447 CDC25AP30304 524 aa12.99□□□□□ -0.33
CLIP2-207ENST00000487447 POLGP54098 1239 aaPredicted RBP12.99□□□□□ -0.33
CLIP2-207ENST00000487447 TMEM62Q0P6H9 643 aa12.99□□□□□ -0.33
CLIP2-207ENST00000487447 GRB10Q13322 594 aa12.99□□□□□ -0.33
CLIP2-207ENST00000487447 EMC2Q15006 297 aa12.99□□□□□ -0.33
CLIP2-207ENST00000487447 ZNF410Q86VK4 478 aa12.99□□□□□ -0.33
CLIP2-207ENST00000487447 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.99□□□□□ -0.33
CLIP2-207ENST00000487447 DBF4BQ8NFT6 615 aa12.99□□□□□ -0.33
CLIP2-207ENST00000487447 TMEM40Q8WWA1 233 aa12.99□□□□□ -0.33
CLIP2-207ENST00000487447 TCP11Q8WWU5 503 aa12.99□□□□□ -0.33
CLIP2-207ENST00000487447 RNPC3Q96LT9 517 aaKnown RBP12.99□□□□□ -0.33
CLIP2-207ENST00000487447 CDX2Q99626 313 aaPredicted RBP12.99□□□□□ -0.33
CLIP2-207ENST00000487447 MTRQ99707 1265 aa12.99□□□□□ -0.33
CLIP2-207ENST00000487447 COL25A1Q9BXS0 654 aaPredicted RBP12.99□□□□□ -0.33
CLIP2-207ENST00000487447 IFIH1Q9BYX4 1025 aaKnown RBP12.99□□□□□ -0.33
CLIP2-207ENST00000487447 NT5C3AQ9H0P0 336 aa12.99□□□□□ -0.33
CLIP2-207ENST00000487447 MTIF3Q9H2K0 278 aaKnown RBP12.99□□□□□ -0.33
CLIP2-207ENST00000487447 SEMA6BQ9H3T3 888 aa12.99□□□□□ -0.33
CLIP2-207ENST00000487447 AGO3Q9H9G7 860 aaKnown RBP12.99□□□□□ -0.33
CLIP2-207ENST00000487447 CDHR5Q9HBB8 845 aa12.99□□□□□ -0.33
CLIP2-207ENST00000487447 DDX19AQ9NUU7 478 aaKnown RBP12.99□□□□□ -0.33
CLIP2-207ENST00000487447 KIAA1024Q9UPX6 916 aa12.99□□□□□ -0.33
CLIP2-207ENST00000487447 GHRP10912 638 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms