RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 ZNF318Q5VUA4 2279 aa18.38■□□□□ 0.53
SRRT-212ENST00000487311 hCG_1984214I3L0E3 225 aa18.38■□□□□ 0.53
SRRT-212ENST00000487311 FSCN2O14926 492 aa18.38■□□□□ 0.53
SRRT-212ENST00000487311 UBE3AQ05086 875 aa18.38■□□□□ 0.53
SRRT-212ENST00000487311 APOBRQ0VD83 1088 aa18.38■□□□□ 0.53
SRRT-212ENST00000487311 KCNC3Q14003 757 aa18.38■□□□□ 0.53
SRRT-212ENST00000487311 CBX2Q14781 532 aaPredicted RBP18.38■□□□□ 0.53
SRRT-212ENST00000487311 PKN1Q16512 942 aa18.38■□□□□ 0.53
SRRT-212ENST00000487311 DUSP6Q16828 381 aa18.38■□□□□ 0.53
SRRT-212ENST00000487311 CKAP2LQ8IYA6 745 aa18.38■□□□□ 0.53
SRRT-212ENST00000487311 METTL13Q8N6R0 699 aa18.38■□□□□ 0.53
SRRT-212ENST00000487311 ZNF713Q8N859 430 aaPredicted RBP18.38■□□□□ 0.53
SRRT-212ENST00000487311 BBXQ8WY36 941 aaPredicted RBP18.38■□□□□ 0.53
SRRT-212ENST00000487311 MFSD14AQ96MC6 490 aa18.38■□□□□ 0.53
SRRT-212ENST00000487311 CASD1Q96PB1 797 aa18.38■□□□□ 0.53
SRRT-212ENST00000487311 PHOX2BQ99453 314 aa18.38■□□□□ 0.53
SRRT-212ENST00000487311 ZNF577Q9BSK1 485 aa18.38■□□□□ 0.53
SRRT-212ENST00000487311 KCNH6Q9H252 994 aa18.38■□□□□ 0.53
SRRT-212ENST00000487311 TLR9Q9NR96 1032 aa18.38■□□□□ 0.53
SRRT-212ENST00000487311 CLCN3P51790 818 aa18.37■□□□□ 0.53
SRRT-212ENST00000487311 ZXDAP98168 799 aa18.37■□□□□ 0.53
SRRT-212ENST00000487311 TRIM67Q6ZTA4 783 aa18.37■□□□□ 0.53
SRRT-212ENST00000487311 BMP8AQ7Z5Y6 402 aa18.37■□□□□ 0.53
SRRT-212ENST00000487311 THNSL1Q8IYQ7 743 aa18.37■□□□□ 0.53
SRRT-212ENST00000487311 SUSD6Q92537 303 aa18.37■□□□□ 0.53
SRRT-212ENST00000487311 ZNF668Q96K58 619 aaPredicted RBP18.37■□□□□ 0.53
SRRT-212ENST00000487311 RPGRIP1Q96KN7 1286 aa18.37■□□□□ 0.53
SRRT-212ENST00000487311 ZMYND12Q9H0C1 365 aa18.37■□□□□ 0.53
SRRT-212ENST00000487311 GLT8D2Q9H1C3 349 aa18.37■□□□□ 0.53
SRRT-212ENST00000487311 S1PR5Q9H228 398 aa18.37■□□□□ 0.53
SRRT-212ENST00000487311 ATP6V0A4Q9HBG4 840 aa18.37■□□□□ 0.53
SRRT-212ENST00000487311 AAASQ9NRG9 546 aa18.37■□□□□ 0.53
SRRT-212ENST00000487311 TMEM161AQ9NX61 479 aa18.37■□□□□ 0.53
SRRT-212ENST00000487311 GABBR1Q9UBS5 961 aa18.37■□□□□ 0.53
SRRT-212ENST00000487311 NAP1L2Q9ULW6 460 aaPredicted RBP18.37■□□□□ 0.53
SRRT-212ENST00000487311 TMEM221A6NGB7 291 aa18.36■□□□□ 0.53
SRRT-212ENST00000487311 M0R296 226 aa18.36■□□□□ 0.53
SRRT-212ENST00000487311 NLRP11P59045 1033 aaKnown RBP18.36■□□□□ 0.53
SRRT-212ENST00000487311 BMP2KLQ5H9B9 411 aa18.36■□□□□ 0.53
SRRT-212ENST00000487311 ZNF746Q6NUN9 644 aaPredicted RBP18.36■□□□□ 0.53
SRRT-212ENST00000487311 LINC01465Q8N7H1 131 aa18.36■□□□□ 0.53
SRRT-212ENST00000487311 RASGRP4Q8TDF6 673 aa18.36■□□□□ 0.53
SRRT-212ENST00000487311 PBXIP1Q96AQ6 731 aa18.36■□□□□ 0.53
SRRT-212ENST00000487311 PHF7Q9BWX1 381 aaPredicted RBP18.36■□□□□ 0.53
SRRT-212ENST00000487311 ADAMTS10Q9H324 1103 aa18.36■□□□□ 0.53
SRRT-212ENST00000487311 ELAC1Q9H777 363 aaKnown RBP18.36■□□□□ 0.53
SRRT-212ENST00000487311 TBC1D22BQ9NU19 505 aa18.36■□□□□ 0.53
SRRT-212ENST00000487311 PCDHA10Q9Y5I2 948 aa18.36■□□□□ 0.53
SRRT-212ENST00000487311 HIDE1A8MVS5 230 aa18.35■□□□□ 0.53
SRRT-212ENST00000487311 ZNF862O60290 1169 aa18.35■□□□□ 0.53
SRRT-212ENST00000487311 PBX3P40426 434 aa18.35■□□□□ 0.53
SRRT-212ENST00000487311 PRR16Q569H4 304 aa18.35■□□□□ 0.53
SRRT-212ENST00000487311 ODR4Q5SWX8 454 aa18.35■□□□□ 0.53
SRRT-212ENST00000487311 PLPP4Q5VZY2 271 aa18.35■□□□□ 0.53
SRRT-212ENST00000487311 EFCAB12Q6NXP0 572 aa18.35■□□□□ 0.53
SRRT-212ENST00000487311 TMEM184AQ6ZMB5 413 aa18.35■□□□□ 0.53
SRRT-212ENST00000487311 LRRC71Q8N4P6 559 aa18.35■□□□□ 0.53
SRRT-212ENST00000487311 PRSS33Q8NF86 280 aa18.35■□□□□ 0.53
SRRT-212ENST00000487311 LENG9Q96B70 501 aa18.35■□□□□ 0.53
SRRT-212ENST00000487311 APOL5Q9BWW9 433 aa18.35■□□□□ 0.53
SRRT-212ENST00000487311 MYH9P35579 1960 aaKnown RBP18.35■□□□□ 0.53
SRRT-212ENST00000487311 ESYT2A0FGR8 921 aa18.34■□□□□ 0.53
SRRT-212ENST00000487311 PSAPP07602 524 aa18.34■□□□□ 0.53
SRRT-212ENST00000487311 METAP2P50579 478 aaKnown RBP eCLIP18.34■□□□□ 0.53
SRRT-212ENST00000487311 PLCB3Q01970 1234 aa18.34■□□□□ 0.53
SRRT-212ENST00000487311 SYCE2Q6PIF2 218 aa18.34■□□□□ 0.53
SRRT-212ENST00000487311 FAM43BQ6ZT52 329 aaPredicted RBP18.34■□□□□ 0.53
SRRT-212ENST00000487311 Q6ZUG5 572 aa18.34■□□□□ 0.53
SRRT-212ENST00000487311 MRPS27Q92552 414 aaKnown RBP18.34■□□□□ 0.53
SRRT-212ENST00000487311 GJA10Q969M2 543 aa18.34■□□□□ 0.53
SRRT-212ENST00000487311 CDH22Q9UJ99 828 aa18.34■□□□□ 0.53
SRRT-212ENST00000487311 PIEZO1Q92508 2521 aa18.34■□□□□ 0.53
SRRT-212ENST00000487311 PRPF3O43395 683 aaKnown RBP18.33■□□□□ 0.52
SRRT-212ENST00000487311 FGFR4P22455 802 aa18.33■□□□□ 0.52
SRRT-212ENST00000487311 CIITAP33076 1130 aa18.33■□□□□ 0.52
SRRT-212ENST00000487311 RCAN1P53805 252 aa18.33■□□□□ 0.52
SRRT-212ENST00000487311 PDE12Q6L8Q7 609 aaKnown RBP18.33■□□□□ 0.52
SRRT-212ENST00000487311 ANKRD54Q6NXT1 300 aa18.33■□□□□ 0.52
SRRT-212ENST00000487311 KCNT2Q6UVM3 1135 aa18.33■□□□□ 0.52
SRRT-212ENST00000487311 SMAP1Q8IYB5 467 aaPredicted RBP18.33■□□□□ 0.52
SRRT-212ENST00000487311 PHKBQ93100 1093 aa18.33■□□□□ 0.52
SRRT-212ENST00000487311 CDCA3Q99618 268 aaPredicted RBP18.33■□□□□ 0.52
SRRT-212ENST00000487311 TCF25Q9BQ70 676 aa18.33■□□□□ 0.52
SRRT-212ENST00000487311 TMEM117Q9H0C3 514 aa18.33■□□□□ 0.52
SRRT-212ENST00000487311 C6orf50Q9HD87 102 aa18.33■□□□□ 0.52
SRRT-212ENST00000487311 RNF216Q9NWF9 866 aaPredicted RBP18.33■□□□□ 0.52
SRRT-212ENST00000487311 AKT3Q9Y243 479 aa18.33■□□□□ 0.52
SRRT-212ENST00000487311 LZTS1Q9Y250 596 aa18.33■□□□□ 0.52
SRRT-212ENST00000487311 MAGEB2O15479 319 aa18.32■□□□□ 0.52
SRRT-212ENST00000487311 CSDE1O75534 798 aaKnown RBP18.32■□□□□ 0.52
SRRT-212ENST00000487311 ATF7P17544 494 aaPredicted RBP18.32■□□□□ 0.52
SRRT-212ENST00000487311 LAG3P18627 525 aa18.32■□□□□ 0.52
SRRT-212ENST00000487311 EIF4BP23588 611 aaKnown RBP18.32■□□□□ 0.52
SRRT-212ENST00000487311 TECP42680 631 aa18.32■□□□□ 0.52
SRRT-212ENST00000487311 NTRK3Q16288 839 aa18.32■□□□□ 0.52
SRRT-212ENST00000487311 UGCGQ16739 394 aa18.32■□□□□ 0.52
SRRT-212ENST00000487311 CLLU1OSQ5K130 101 aa18.32■□□□□ 0.52
SRRT-212ENST00000487311 LLGL2Q6P1M3 1020 aa18.32■□□□□ 0.52
SRRT-212ENST00000487311 ECHDC2Q86YB7 292 aa18.32■□□□□ 0.52
SRRT-212ENST00000487311 REXO1Q8N1G1 1221 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms