RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 PBX1P40424 430 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 COPB1P53618 953 aaKnown RBP15.7■□□□□ 0.1
CUX1-209ENST00000487284 RAD51AP2Q09MP3 1159 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 LRRC41Q15345 812 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 FILIP1LQ4L180 1135 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 ZCWPW2Q504Y3 356 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 LRRC8AQ8IWT6 810 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 CCDC150Q8NCX0 1101 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 SLAIN1Q8ND83 568 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 SPATA33Q96N06 139 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 DBR1Q9UK59 544 aaKnown RBP15.7■□□□□ 0.1
CUX1-209ENST00000487284 FAM184BQ9ULE4 1060 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 NOP56O00567 594 aaKnown RBP15.69■□□□□ 0.1
CUX1-209ENST00000487284 NKRFO15226 690 aaKnown RBP eCLIP15.69■□□□□ 0.1
CUX1-209ENST00000487284 TBCAO75347 108 aaKnown RBP15.69■□□□□ 0.1
CUX1-209ENST00000487284 KIF20AO95235 890 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 ATG7O95352 703 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 SUPT20HL2P0C7V6 817 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 AKR1A1P14550 325 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 CNGA1P29973 690 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 CLCN1P35523 988 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 LRMPQ12912 555 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 TBX2Q13207 712 aaPredicted RBP15.69■□□□□ 0.1
CUX1-209ENST00000487284 LAMC2Q13753 1193 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 ARID5BQ14865 1188 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 UGCGQ16739 394 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 MAP3K21Q5TCX8 1036 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 SFR1Q86XK3 245 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 CCDC60Q8IWA6 550 aaPredicted RBP15.69■□□□□ 0.1
CUX1-209ENST00000487284 FAM114A1Q8IWE2 563 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 C4orf19Q8IY42 314 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 OR6J1Q8NGC5 347 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 EMID1Q96A84 441 aaPredicted RBP15.69■□□□□ 0.1
CUX1-209ENST00000487284 GPR20Q99678 358 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 FGFBP2Q9BYJ0 223 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 OLFML3Q9NRN5 406 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 ODF2LQ9ULJ1 636 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 GNEQ9Y223 722 aaKnown RBP15.69■□□□□ 0.1
CUX1-209ENST00000487284 COL4A3BPQ9Y5P4 624 aa15.69■□□□□ 0.1
CUX1-209ENST00000487284 ARHGEF35A5YM69 484 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 RSPH10B2B2RC85 870 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 INHAP05111 366 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 PSAPP07602 524 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 RSPH10BP0C881 870 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 GUCY2CP25092 1073 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 CCND3P30281 292 aaPredicted RBP15.68■□□□□ 0.1
CUX1-209ENST00000487284 GRK4P32298 578 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 TCF7P36402 384 aaPredicted RBP15.68■□□□□ 0.1
CUX1-209ENST00000487284 LBX1P52954 281 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 SPECC1LQ69YQ0 1117 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 SWSAP1Q6NVH7 229 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 MIS18BP1Q6P0N0 1132 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 EPM2AIP1Q7L775 607 aaPredicted RBP15.68■□□□□ 0.1
CUX1-209ENST00000487284 AFG1LQ8WV93 481 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 SCFD1Q8WVM8 642 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 SEPT1Q8WYJ6 367 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 TAB2Q9NYJ8 693 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 TBC1D7Q9P0N9 293 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 GABBR1Q9UBS5 961 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 PYCARDQ9ULZ3 195 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 PTPN22Q9Y2R2 807 aa15.68■□□□□ 0.1
CUX1-209ENST00000487284 BACH1O14867 736 aa15.67■□□□□ 0.1
CUX1-209ENST00000487284 DYNC1LI2O43237 492 aaPredicted RBP15.67■□□□□ 0.1
CUX1-209ENST00000487284 TEX33O43247 280 aa15.67■□□□□ 0.1
CUX1-209ENST00000487284 ZNF131P52739 623 aa15.67■□□□□ 0.1
CUX1-209ENST00000487284 PSMC5P62195 406 aa15.67■□□□□ 0.1
CUX1-209ENST00000487284 ARMCX5Q6P1M9 558 aa15.67■□□□□ 0.1
CUX1-209ENST00000487284 TLK2Q86UE8 772 aa15.67■□□□□ 0.1
CUX1-209ENST00000487284 KIAA1524Q8TCG1 905 aa15.67■□□□□ 0.1
CUX1-209ENST00000487284 PCYT2Q99447 389 aa15.67■□□□□ 0.1
CUX1-209ENST00000487284 TSG101Q99816 390 aa15.67■□□□□ 0.1
CUX1-209ENST00000487284 KCTD10Q9H3F6 313 aa15.67■□□□□ 0.1
CUX1-209ENST00000487284 ZHX3Q9H4I2 956 aa15.67■□□□□ 0.1
CUX1-209ENST00000487284 MAGEC2Q9UBF1 373 aaPredicted RBP15.67■□□□□ 0.1
CUX1-209ENST00000487284 SEL1LQ9UBV2 794 aa15.67■□□□□ 0.1
CUX1-209ENST00000487284 ITIH6Q6UXX5 1313 aa15.67■□□□□ 0.1
CUX1-209ENST00000487284 IGSF9BQ9UPX0 1349 aa15.67■□□□□ 0.1
CUX1-209ENST00000487284 IGKV6D-21A0A0A0MT36 114 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 N4BP3O15049 544 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 SEPT4O43236 478 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 FAM13AO94988 1023 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 FGFR1OPO95684 399 aaKnown RBP15.66■□□□□ 0.1
CUX1-209ENST00000487284 CTCFP49711 727 aaPredicted RBP15.66■□□□□ 0.1
CUX1-209ENST00000487284 IRX5P78411 483 aaPredicted RBP15.66■□□□□ 0.1
CUX1-209ENST00000487284 CCZ1BP86790 482 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 CCZ1P86791 482 aaPredicted RBP15.66■□□□□ 0.1
CUX1-209ENST00000487284 BMT2Q1RMZ1 405 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 LRRC55Q6ZSA7 311 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 PPTC7Q8NI37 304 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 SH3TC2Q8TF17 1288 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 CNOT6LQ96LI5 555 aaKnown RBP15.66■□□□□ 0.1
CUX1-209ENST00000487284 VPS16Q9H269 839 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 ANKEF1Q9NU02 776 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 LGALS16A8MUM7 142 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 ZNF862O60290 1169 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 SFPQP23246 707 aaKnown RBP eCLIP15.66■□□□□ 0.1
CUX1-209ENST00000487284 YWHABP31946 246 aaKnown RBP15.66■□□□□ 0.1
CUX1-209ENST00000487284 RARRES1P49788 294 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 CASP5P51878 434 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 MAPK7Q13164 816 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms