RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 LMAN2LQ9H0V9 348 aa27.72■■■□□ 2.03
LIME1-206ENST00000487026 EPHX3Q9H6B9 360 aa27.72■■■□□ 2.03
LIME1-206ENST00000487026 RGS18Q9NS28 235 aa27.72■■■□□ 2.03
LIME1-206ENST00000487026 CLDND1Q9NY35 253 aa27.72■■■□□ 2.03
LIME1-206ENST00000487026 KCNJ14Q9UNX9 436 aa27.72■■■□□ 2.03
LIME1-206ENST00000487026 AKT3Q9Y243 479 aa27.72■■■□□ 2.03
LIME1-206ENST00000487026 MAGEB2O15479 319 aa27.71■■■□□ 2.03
LIME1-206ENST00000487026 COL9A1P20849 921 aa27.71■■■□□ 2.03
LIME1-206ENST00000487026 CAMK1Q14012 370 aa27.71■■■□□ 2.03
LIME1-206ENST00000487026 KHSRPQ92945 711 aaKnown RBP eCLIP27.71■■■□□ 2.03
LIME1-206ENST00000487026 C22orf23Q9BZE7 217 aa27.71■■■□□ 2.03
LIME1-206ENST00000487026 PSMD10O75832 226 aa27.7■■■□□ 2.02
LIME1-206ENST00000487026 ITGB1P05556 798 aa27.7■■■□□ 2.02
LIME1-206ENST00000487026 DNAJB1P25685 340 aa27.7■■■□□ 2.02
LIME1-206ENST00000487026 NLRP11P59045 1033 aaKnown RBP27.7■■■□□ 2.02
LIME1-206ENST00000487026 SCRN1Q12765 414 aa27.7■■■□□ 2.02
LIME1-206ENST00000487026 FAM102BQ5T8I3 360 aa27.7■■■□□ 2.02
LIME1-206ENST00000487026 LINC01465Q8N7H1 131 aa27.7■■■□□ 2.02
LIME1-206ENST00000487026 DAGLBQ8NCG7 672 aa27.7■■■□□ 2.02
LIME1-206ENST00000487026 IGFLR1Q9H665 355 aa27.7■■■□□ 2.02
LIME1-206ENST00000487026 RAPGEFL1Q9UHV5 662 aa27.7■■■□□ 2.02
LIME1-206ENST00000487026 WDR81Q562E7 1941 aa27.69■■■□□ 2.02
LIME1-206ENST00000487026 CYP3A7-CYP3A51PA0A087WV96 503 aa27.69■■■□□ 2.02
LIME1-206ENST00000487026 GRXCR2A6NFK2 248 aa27.69■■■□□ 2.02
LIME1-206ENST00000487026 CYP3A7P24462 503 aa27.69■■■□□ 2.02
LIME1-206ENST00000487026 SFNP31947 248 aa27.69■■■□□ 2.02
LIME1-206ENST00000487026 GTF2F1P35269 517 aaKnown RBP eCLIP27.69■■■□□ 2.023e-6■□□□□ 10.3
LIME1-206ENST00000487026 JAK3P52333 1124 aa27.69■■■□□ 2.02
LIME1-206ENST00000487026 HYAL1Q12794 435 aa27.69■■■□□ 2.02
LIME1-206ENST00000487026 COL19A1Q14993 1142 aa27.69■■■□□ 2.02
LIME1-206ENST00000487026 INF2Q27J81 1249 aa27.69■■■□□ 2.02
LIME1-206ENST00000487026 ODR4Q5SWX8 454 aa27.69■■■□□ 2.02
LIME1-206ENST00000487026 SLC24A5Q71RS6 500 aa27.69■■■□□ 2.02
LIME1-206ENST00000487026 MIER3Q7Z3K6 550 aa27.69■■■□□ 2.02
LIME1-206ENST00000487026 KLHL23Q8NBE8 558 aa27.69■■■□□ 2.02
LIME1-206ENST00000487026 ADAMTS10Q9H324 1103 aa27.69■■■□□ 2.02
LIME1-206ENST00000487026 TPCN1Q9ULQ1 816 aa27.69■■■□□ 2.02
LIME1-206ENST00000487026 ATG2AQ2TAZ0 1938 aa27.69■■■□□ 2.02
LIME1-206ENST00000487026 C9IYK1 514 aa27.68■■■□□ 2.02
LIME1-206ENST00000487026 MMP1P03956 469 aa27.68■■■□□ 2.02
LIME1-206ENST00000487026 TMOD1P28289 359 aa27.68■■■□□ 2.02
LIME1-206ENST00000487026 LTBRP36941 435 aa27.68■■■□□ 2.02
LIME1-206ENST00000487026 FAM178BQ8IXR5 827 aa27.68■■■□□ 2.02
LIME1-206ENST00000487026 SPPL3Q8TCT6 385 aa27.68■■■□□ 2.02
LIME1-206ENST00000487026 P2RX5Q93086 422 aa27.68■■■□□ 2.02
LIME1-206ENST00000487026 MAP7D2Q96T17 732 aa27.68■■■□□ 2.02
LIME1-206ENST00000487026 C1orf112Q9NSG2 853 aa27.68■■■□□ 2.02
LIME1-206ENST00000487026 GJB4Q9NTQ9 266 aa27.68■■■□□ 2.02
LIME1-206ENST00000487026 TMEM150BA6NC51 233 aa27.67■■■□□ 2.02
LIME1-206ENST00000487026 TBKBP1A7MCY6 615 aa27.67■■■□□ 2.02
LIME1-206ENST00000487026 NONOQ15233 471 aaKnown RBP eCLIP27.67■■■□□ 2.02
LIME1-206ENST00000487026 GALNT17Q6IS24 598 aa27.67■■■□□ 2.02
LIME1-206ENST00000487026 MBOAT7Q96N66 472 aa27.67■■■□□ 2.02
LIME1-206ENST00000487026 SH2D3AQ9BRG2 576 aa27.67■■■□□ 2.02
LIME1-206ENST00000487026 SLKQ9H2G2 1235 aaPredicted RBP27.67■■■□□ 2.02
LIME1-206ENST00000487026 PPP4R2Q9NY27 417 aa27.67■■■□□ 2.02
LIME1-206ENST00000487026 KIAA1671Q9BY89 1806 aa27.67■■■□□ 2.02
LIME1-206ENST00000487026 FAM189BP81408 668 aa27.66■■■□□ 2.02
LIME1-206ENST00000487026 DLX2Q07687 328 aaPredicted RBP27.66■■■□□ 2.02
LIME1-206ENST00000487026 DSC3Q14574 896 aa27.66■■■□□ 2.02
LIME1-206ENST00000487026 NAALADL2Q58DX5 795 aa27.66■■■□□ 2.02
LIME1-206ENST00000487026 SPOUT1Q5T280 376 aaKnown RBP27.66■■■□□ 2.02
LIME1-206ENST00000487026 ETNPPLQ8TBG4 499 aa27.66■■■□□ 2.02
LIME1-206ENST00000487026 C1QTNF1Q9BXJ1 281 aa27.66■■■□□ 2.02
LIME1-206ENST00000487026 HCSTQ9UBK5 93 aa27.66■■■□□ 2.02
LIME1-206ENST00000487026 PFKFB2O60825 505 aa27.65■■■□□ 2.02
LIME1-206ENST00000487026 CDKL5O76039 1030 aa27.65■■■□□ 2.02
LIME1-206ENST00000487026 FGFR1P11362 822 aa27.65■■■□□ 2.02
LIME1-206ENST00000487026 IRS1P35568 1242 aa27.65■■■□□ 2.02
LIME1-206ENST00000487026 TBC1D8BQ0IIM8 1120 aa27.65■■■□□ 2.02
LIME1-206ENST00000487026 CLUL1Q15846 466 aa27.65■■■□□ 2.02
LIME1-206ENST00000487026 CTC1Q2NKJ3 1217 aa27.65■■■□□ 2.02
LIME1-206ENST00000487026 LETM2Q2VYF4 491 aa27.65■■■□□ 2.02
LIME1-206ENST00000487026 PUS10Q3MIT2 529 aaKnown RBP27.65■■■□□ 2.02
LIME1-206ENST00000487026 B3GNT9Q6UX72 402 aa27.65■■■□□ 2.02
LIME1-206ENST00000487026 KRT25Q7Z3Z0 450 aa27.65■■■□□ 2.02
LIME1-206ENST00000487026 GJD3Q8N144 294 aa27.65■■■□□ 2.02
LIME1-206ENST00000487026 POF1BQ8WVV4 589 aa27.65■■■□□ 2.02
LIME1-206ENST00000487026 PHF20Q9BVI0 1012 aa27.65■■■□□ 2.02
LIME1-206ENST00000487026 ATP6V0A4Q9HBG4 840 aa27.65■■■□□ 2.02
LIME1-206ENST00000487026 SEPT9Q9UHD8 586 aaPredicted RBP27.65■■■□□ 2.02
LIME1-206ENST00000487026 DDX25Q9UHL0 483 aaKnown RBP27.65■■■□□ 2.02
LIME1-206ENST00000487026 LINC01565O15544 149 aa27.64■■■□□ 2.02
LIME1-206ENST00000487026 NCK2O43639 380 aa27.64■■■□□ 2.02
LIME1-206ENST00000487026 SLC37A4O43826 429 aa27.64■■■□□ 2.02
LIME1-206ENST00000487026 STBD1O95210 358 aa27.64■■■□□ 2.02
LIME1-206ENST00000487026 EIF4BP23588 611 aaKnown RBP27.64■■■□□ 2.02
LIME1-206ENST00000487026 DRP2Q13474 957 aa27.64■■■□□ 2.02
LIME1-206ENST00000487026 TARBP2Q15633 366 aaKnown RBP27.64■■■□□ 2.02
LIME1-206ENST00000487026 MTERF2Q49AM1 385 aa27.64■■■□□ 2.02
LIME1-206ENST00000487026 FAM43BQ6ZT52 329 aaPredicted RBP27.64■■■□□ 2.02
LIME1-206ENST00000487026 FAM177A1Q8N128 213 aaPredicted RBP27.64■■■□□ 2.02
LIME1-206ENST00000487026 RDM1Q8NG50 284 aa27.64■■■□□ 2.02
LIME1-206ENST00000487026 TYW1Q9NV66 732 aaKnown RBP27.64■■■□□ 2.02
LIME1-206ENST00000487026 FGFR4P22455 802 aa27.63■■■□□ 2.01
LIME1-206ENST00000487026 SSTR3P32745 418 aaPredicted RBP27.63■■■□□ 2.01
LIME1-206ENST00000487026 GPC3P51654 580 aa27.63■■■□□ 2.01
LIME1-206ENST00000487026 XKR3Q5GH77 459 aa27.63■■■□□ 2.01
LIME1-206ENST00000487026 MOXD1Q6UVY6 613 aa27.63■■■□□ 2.01
LIME1-206ENST00000487026 ADGRD2Q7Z7M1 963 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms