RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 TYW1Q9NV66 732 aaKnown RBP13.27□□□□□ -0.28
COL3A1-206ENST00000487010 GCNT4Q9P109 453 aa13.27□□□□□ -0.28
COL3A1-206ENST00000487010 DNM3Q9UQ16 869 aa13.27□□□□□ -0.28
COL3A1-206ENST00000487010 DIS3Q9Y2L1 958 aaKnown RBP13.27□□□□□ -0.28
COL3A1-206ENST00000487010 ASTN1O14525 1302 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 PHF20L1A8MW92 1017 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 BACH1O14867 736 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 DDX3YO15523 660 aaKnown RBP13.27□□□□□ -0.29
COL3A1-206ENST00000487010 BUB1BO60566 1050 aaPredicted RBP13.27□□□□□ -0.29
COL3A1-206ENST00000487010 DRD4P21917 467 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 RDXP35241 583 aaKnown RBP13.27□□□□□ -0.29
COL3A1-206ENST00000487010 STAT1P42224 750 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 PTENP60484 403 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 SPIRE1Q08AE8 756 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 IFFO1Q0D2I5 559 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 PABPC4Q13310 644 aaKnown RBP eCLIP13.27□□□□□ -0.29
COL3A1-206ENST00000487010 PICALMQ13492 652 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 BMT2Q1RMZ1 405 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 GKAP1Q5VSY0 366 aaPredicted RBP13.27□□□□□ -0.29
COL3A1-206ENST00000487010 KCTD1Q719H9 257 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 CPLX4Q7Z7G2 160 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 OLIG1Q8TAK6 271 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 LNX1Q8TBB1 728 aaPredicted RBP13.27□□□□□ -0.29
COL3A1-206ENST00000487010 P3H4Q92791 437 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 ARHGEF1Q92888 912 aaKnown RBP13.27□□□□□ -0.29
COL3A1-206ENST00000487010 CENPTQ96BT3 561 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 FMO2Q99518 471 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 TRIM51Q9BSJ1 452 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 ANO3Q9BYT9 981 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 ATP8A1Q9Y2Q0 1164 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 RTCBQ9Y3I0 505 aaKnown RBP13.27□□□□□ -0.29
COL3A1-206ENST00000487010 NR2E1Q9Y466 385 aa13.27□□□□□ -0.29
COL3A1-206ENST00000487010 NCANO14594 1321 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 C10orf71Q711Q0 1435 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 MEIS1O00470 390 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 SPATA31C1P0DKV0 1188 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 ATP2B4P23634 1241 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 RPA1P27694 616 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 SCTRP47872 440 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 PPATQ06203 517 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 PREPLQ4J6C6 727 aaPredicted RBP13.26□□□□□ -0.29
COL3A1-206ENST00000487010 ERMARDQ5T6L9 678 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 DUPD1Q68J44 220 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 CYB5D1Q6P9G0 228 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 AMIGO3Q86WK7 504 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 PARP9Q8IXQ6 854 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 FUKQ8N0W3 1084 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 ERMNQ8TAM6 284 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 SLC35G2Q8TBE7 412 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 ETNPPLQ8TBG4 499 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 XPO6Q96QU8 1125 aaKnown RBP13.26□□□□□ -0.29
COL3A1-206ENST00000487010 TACO1Q9BSH4 297 aaKnown RBP13.26□□□□□ -0.29
COL3A1-206ENST00000487010 TRIM31Q9BZY9 425 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 OSGEPQ9NPF4 335 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 PPP1R9AQ9ULJ8 1098 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 DAGLAQ9Y4D2 1042 aa13.26□□□□□ -0.29
COL3A1-206ENST00000487010 EVI5O60447 810 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 CAND2O75155 1236 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 TMEM253P0C7T8 217 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 CCDC172P0C7W6 258 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 GHRP10912 638 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 LMNB1P20700 586 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 SNCBQ16143 134 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 PPP2R5EQ16537 467 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 DCAF12L1Q5VU92 463 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 MOXD1Q6UVY6 613 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 TAX1BP1Q86VP1 789 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 HOOK3Q86VS8 718 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 CCDC50Q8IVM0 306 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 MDM1Q8TC05 714 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 TBC1D22AQ8WUA7 517 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 RFFLQ8WZ73 363 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 CCT6BQ92526 530 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 CHMP6Q96FZ7 201 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 KDM4CQ9H3R0 1056 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 ZDHHC18Q9NUE0 388 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 HAUS2Q9NVX0 235 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 F8W031 263 aaPredicted RBP13.25□□□□□ -0.29
COL3A1-206ENST00000487010 CLIC2O15247 247 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 SOX5P35711 763 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 DR1Q01658 176 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 XRCC4Q13426 336 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 PLS1Q14651 629 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 WLSQ5T9L3 541 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 BORCS6Q96GS4 357 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 SGSM3Q96HU1 749 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 ERP44Q9BS26 406 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 FAM129AQ9BZQ8 928 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 EPB41L4BQ9H329 900 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 GGA1Q9UJY5 639 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 PNMA2Q9UL42 364 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 PCDHB13Q9Y5F0 798 aa13.25□□□□□ -0.29
COL3A1-206ENST00000487010 MYO3BQ8WXR4 1341 aa13.24□□□□□ -0.29
COL3A1-206ENST00000487010 RSPH10B2B2RC85 870 aa13.24□□□□□ -0.29
COL3A1-206ENST00000487010 NUDT17P0C025 328 aa13.24□□□□□ -0.29
COL3A1-206ENST00000487010 RSPH10BP0C881 870 aa13.24□□□□□ -0.29
COL3A1-206ENST00000487010 FAM98CQ17RN3 349 aaKnown RBP13.24□□□□□ -0.29
COL3A1-206ENST00000487010 QRICH1Q2TAL8 776 aa13.24□□□□□ -0.29
COL3A1-206ENST00000487010 GLYCTKQ8IVS8 523 aa13.24□□□□□ -0.29
COL3A1-206ENST00000487010 CRYGNQ8WXF5 182 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms