RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 FAM186BQ8IYM0 893 aa19.67■□□□□ 0.74
PDLIM7-207ENST00000486828 RBM46Q8TBY0 533 aaKnown RBP19.67■□□□□ 0.74
PDLIM7-207ENST00000486828 MKNK1Q9BUB5 465 aa19.67■□□□□ 0.74
PDLIM7-207ENST00000486828 SELENOOQ9BVL4 669 aa19.67■□□□□ 0.74
PDLIM7-207ENST00000486828 GLIS2Q9BZE0 524 aaPredicted RBP19.67■□□□□ 0.74
PDLIM7-207ENST00000486828 GCNT4Q9P109 453 aa19.67■□□□□ 0.74
PDLIM7-207ENST00000486828 FAN1Q9Y2M0 1017 aa19.67■□□□□ 0.74
PDLIM7-207ENST00000486828 PPP1R12BO60237 982 aaPredicted RBP19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 HSD17B4P51659 736 aa19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 STXBP4Q6ZWJ1 553 aa19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 ZNF720Q7Z2F6 126 aa19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 AGBL3Q8NEM8 1001 aa19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 AENQ8WTP8 325 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 RIT2Q99578 217 aa19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 MXRA8Q9BRK3 442 aa19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 PGAP2Q9UHJ9 254 aa19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 DMGDHQ9UI17 866 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 ATP8B3O60423 1300 aa19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 IPO5O00410 1097 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 FTCDO95954 541 aa19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 MATR3P43243 847 aaKnown RBP eCLIP19.66■□□□□ 0.745e-11■■■□□ 18.9
PDLIM7-207ENST00000486828 SAMD1Q6SPF0 538 aaPredicted RBP19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 FAM178BQ8IXR5 827 aa19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 NEK9Q8TD19 979 aa19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 HDAC7Q8WUI4 952 aa19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 ZFP91Q96JP5 570 aaPredicted RBP19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 VPS33BQ9H267 617 aa19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 ZC3H4Q9UPT8 1303 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-207ENST00000486828 A0A0U1RQG5 324 aaPredicted RBP19.65■□□□□ 0.74
PDLIM7-207ENST00000486828 GRID2IPA4D2P6 1211 aa19.65■□□□□ 0.74
PDLIM7-207ENST00000486828 ICAM1P05362 532 aa19.65■□□□□ 0.74
PDLIM7-207ENST00000486828 ASNSP08243 561 aa19.65■□□□□ 0.74
PDLIM7-207ENST00000486828 MAP3K10Q02779 954 aa19.65■□□□□ 0.74
PDLIM7-207ENST00000486828 GLE1Q53GS7 698 aaKnown RBP19.65■□□□□ 0.74
PDLIM7-207ENST00000486828 LXNQ9BS40 222 aa19.65■□□□□ 0.74
PDLIM7-207ENST00000486828 IKZF4Q9H2S9 585 aa19.65■□□□□ 0.74
PDLIM7-207ENST00000486828 RBM12Q9NTZ6 932 aaKnown RBP19.65■□□□□ 0.74
PDLIM7-207ENST00000486828 NAGPAQ9UK23 515 aa19.65■□□□□ 0.74
PDLIM7-207ENST00000486828 AJAP1Q9UKB5 411 aaPredicted RBP19.65■□□□□ 0.74
PDLIM7-207ENST00000486828 BCRP11274 1271 aa19.64■□□□□ 0.74
PDLIM7-207ENST00000486828 GUCY2CP25092 1073 aa19.64■□□□□ 0.74
PDLIM7-207ENST00000486828 HS2ST1Q7LGA3 356 aa19.64■□□□□ 0.74
PDLIM7-207ENST00000486828 MS4A14Q96JA4 679 aa19.64■□□□□ 0.74
PDLIM7-207ENST00000486828 DMAC2Q9NW81 257 aa19.64■□□□□ 0.74
PDLIM7-207ENST00000486828 STIM2Q9P246 746 aa19.64■□□□□ 0.74
PDLIM7-207ENST00000486828 CCPG1Q9ULG6 757 aa19.64■□□□□ 0.74
PDLIM7-207ENST00000486828 NENFQ9UMX5 172 aa19.64■□□□□ 0.74
PDLIM7-207ENST00000486828 RPTORQ8N122 1335 aa19.64■□□□□ 0.74
PDLIM7-207ENST00000486828 LOXHD1Q8IVV2 1947 aa19.64■□□□□ 0.73
PDLIM7-207ENST00000486828 FLOT1O75955 427 aa19.64■□□□□ 0.73
PDLIM7-207ENST00000486828 SYF2O95926 243 aaKnown RBP19.64■□□□□ 0.73
PDLIM7-207ENST00000486828 TNFRSF8P28908 595 aa19.64■□□□□ 0.73
PDLIM7-207ENST00000486828 COG2Q14746 738 aa19.64■□□□□ 0.73
PDLIM7-207ENST00000486828 ODR4Q5SWX8 454 aa19.64■□□□□ 0.73
PDLIM7-207ENST00000486828 ALKBH5Q6P6C2 394 aaKnown RBP19.64■□□□□ 0.73
PDLIM7-207ENST00000486828 ZBTB9Q96C00 473 aa19.64■□□□□ 0.73
PDLIM7-207ENST00000486828 ZBED3Q96IU2 234 aaPredicted RBP19.64■□□□□ 0.73
PDLIM7-207ENST00000486828 AGBL1Q96MI9 1066 aa19.64■□□□□ 0.73
PDLIM7-207ENST00000486828 AGPAT3Q9NRZ7 376 aa19.64■□□□□ 0.73
PDLIM7-207ENST00000486828 ZNRF3Q9ULT6 936 aa19.64■□□□□ 0.73
PDLIM7-207ENST00000486828 ZNF536O15090 1300 aa19.64■□□□□ 0.73
PDLIM7-207ENST00000486828 ARHGEF35A5YM69 484 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 ITGB5P18084 799 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 IFI16Q16666 785 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 C8orf74Q6P047 294 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 KSR1Q8IVT5 923 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 BANK1Q8NDB2 785 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 GDAP1L1Q96MZ0 367 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 FERP16591 822 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 INPP5BP32019 993 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 LMAN1P49257 510 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 FMO5P49326 533 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 SLC7A5Q01650 507 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 TAF3Q5VWG9 929 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 GJB7Q6PEY0 223 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 NIPA1Q7RTP0 329 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 VPS36Q86VN1 386 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 NIM1KQ8IY84 436 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 GOLGA5Q8TBA6 731 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 STRA6Q9BX79 667 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 FRMD4BQ9Y2L6 1034 aa19.63■□□□□ 0.73
PDLIM7-207ENST00000486828 CES2O00748 559 aa19.62■□□□□ 0.73
PDLIM7-207ENST00000486828 RNF40O75150 1001 aa19.62■□□□□ 0.73
PDLIM7-207ENST00000486828 STAT1P42224 750 aa19.62■□□□□ 0.73
PDLIM7-207ENST00000486828 MAPK7Q13164 816 aa19.62■□□□□ 0.73
PDLIM7-207ENST00000486828 PPP2R5AQ15172 486 aa19.62■□□□□ 0.73
PDLIM7-207ENST00000486828 INPP4AQ96PE3 977 aaPredicted RBP19.62■□□□□ 0.73
PDLIM7-207ENST00000486828 ZNF341Q9BYN7 854 aa19.62■□□□□ 0.73
PDLIM7-207ENST00000486828 COL20A1Q9P218 1284 aa19.62■□□□□ 0.73
PDLIM7-207ENST00000486828 HIP1RO75146 1068 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 PHACTR2O75167 634 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 PPP1R37O75864 691 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 EPHB4P54760 987 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 GHRHRQ02643 423 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 MIER3Q7Z3K6 550 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 MCF2L2Q86YR7 1114 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 DAW1Q8N136 415 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 CLEC4DQ8WXI8 215 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 HINFPQ9BQA5 517 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 KCNH7Q9NS40 1196 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms