RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 GYS2P54840 703 aa6.53□□□□□ -1.36
COPS3-209ENST00000486810 RIPK4P57078 832 aa6.53□□□□□ -1.36
COPS3-209ENST00000486810 TMEM132BQ14DG7 1078 aa6.53□□□□□ -1.36
COPS3-209ENST00000486810 SMAD2Q15796 467 aaKnown RBP6.53□□□□□ -1.36
COPS3-209ENST00000486810 CDC37Q16543 378 aaPredicted RBP6.53□□□□□ -1.36
COPS3-209ENST00000486810 ARHGAP44Q17R89 818 aa6.53□□□□□ -1.36
COPS3-209ENST00000486810 CC2D1AQ6P1N0 951 aaPredicted RBP6.53□□□□□ -1.36
COPS3-209ENST00000486810 TRMT10BQ6PF06 316 aaKnown RBP6.53□□□□□ -1.36
COPS3-209ENST00000486810 LRSAM1Q6UWE0 723 aa6.53□□□□□ -1.36
COPS3-209ENST00000486810 KRBA2Q6ZNG9 492 aa6.53□□□□□ -1.36
COPS3-209ENST00000486810 UBE2R2Q712K3 238 aaPredicted RBP6.53□□□□□ -1.36
COPS3-209ENST00000486810 APBB1IPQ7Z5R6 666 aaPredicted RBP6.53□□□□□ -1.36
COPS3-209ENST00000486810 NXPE1Q8N323 547 aa6.53□□□□□ -1.36
COPS3-209ENST00000486810 CXorf38Q8TB03 319 aa6.53□□□□□ -1.36
COPS3-209ENST00000486810 FOXRED1Q96CU9 486 aaPredicted RBP6.53□□□□□ -1.36
COPS3-209ENST00000486810 WRNIP1Q96S55 665 aa6.53□□□□□ -1.36
COPS3-209ENST00000486810 UCKL1Q9NWZ5 548 aa6.53□□□□□ -1.36
COPS3-209ENST00000486810 PLAAQ9Y263 795 aa6.53□□□□□ -1.36
COPS3-209ENST00000486810 RPS6KL1Q9Y6S9 549 aa6.53□□□□□ -1.36
COPS3-209ENST00000486810 GSG1L2A8MUP6 293 aa6.52□□□□□ -1.37
COPS3-209ENST00000486810 CTAGE5O15320 804 aa6.52□□□□□ -1.37
COPS3-209ENST00000486810 PRICKLE3O43900 615 aaPredicted RBP6.52□□□□□ -1.37
COPS3-209ENST00000486810 OFD1O75665 1012 aa6.52□□□□□ -1.37
COPS3-209ENST00000486810 FLT3P36888 993 aa6.52□□□□□ -1.37
COPS3-209ENST00000486810 CD151P48509 253 aa6.52□□□□□ -1.37
COPS3-209ENST00000486810 IL13RA1P78552 427 aa6.52□□□□□ -1.37
COPS3-209ENST00000486810 DSG1Q02413 1049 aa6.52□□□□□ -1.37
COPS3-209ENST00000486810 CT47A1Q5JQC4 288 aaPredicted RBP6.52□□□□□ -1.37
COPS3-209ENST00000486810 ZNF280DQ6N043 979 aa6.52□□□□□ -1.37
COPS3-209ENST00000486810 RTN4RL1Q86UN2 441 aaPredicted RBP6.52□□□□□ -1.37
COPS3-209ENST00000486810 GBP4Q96PP9 640 aa6.52□□□□□ -1.37
COPS3-209ENST00000486810 UBA5Q9GZZ9 404 aa6.52□□□□□ -1.37
COPS3-209ENST00000486810 MED4Q9NPJ6 270 aa6.52□□□□□ -1.37
COPS3-209ENST00000486810 INCENPQ9NQS7 918 aa6.52□□□□□ -1.37
COPS3-209ENST00000486810 GALNT8Q9NY28 637 aa6.52□□□□□ -1.37
COPS3-209ENST00000486810 H2AFY2Q9P0M6 372 aaPredicted RBP6.52□□□□□ -1.37
COPS3-209ENST00000486810 ARHGAP28Q9P2N2 729 aa6.52□□□□□ -1.37
COPS3-209ENST00000486810 RAPGEFL1Q9UHV5 662 aa6.52□□□□□ -1.37
COPS3-209ENST00000486810 SMC3Q9UQE7 1217 aa6.52□□□□□ -1.37
COPS3-209ENST00000486810 TMA7Q9Y2S6 64 aaKnown RBP6.52□□□□□ -1.37
COPS3-209ENST00000486810 KRTAP4-8A0A0G2JLE6 195 aa6.51□□□□□ -1.37
COPS3-209ENST00000486810 PRAMEF22A3QJZ6 481 aa6.51□□□□□ -1.37
COPS3-209ENST00000486810 MROH6A6NGR9 719 aa6.51□□□□□ -1.37
COPS3-209ENST00000486810 GOLGA6L22H0YM25 854 aa6.51□□□□□ -1.37
COPS3-209ENST00000486810 IPO8O15397 1037 aaKnown RBP6.51□□□□□ -1.37
COPS3-209ENST00000486810 F2P00734 622 aa6.51□□□□□ -1.37
COPS3-209ENST00000486810 ATP2A2P16615 1042 aaKnown RBP6.51□□□□□ -1.37
COPS3-209ENST00000486810 HSD3B2P26439 372 aa6.51□□□□□ -1.37
COPS3-209ENST00000486810 NEK4P51957 841 aa6.51□□□□□ -1.37
COPS3-209ENST00000486810 KIF11P52732 1056 aa6.51□□□□□ -1.37
COPS3-209ENST00000486810 STILQ15468 1287 aa6.51□□□□□ -1.37
COPS3-209ENST00000486810 LONRF3Q496Y0 759 aa6.51□□□□□ -1.37
COPS3-209ENST00000486810 L2HGDHQ9H9P8 463 aa6.51□□□□□ -1.37
COPS3-209ENST00000486810 CABP5Q9NP86 173 aa6.51□□□□□ -1.37
COPS3-209ENST00000486810 SYNPO2Q9UMS6 1093 aa6.51□□□□□ -1.37
COPS3-209ENST00000486810 KNSTRNQ9Y448 316 aa6.51□□□□□ -1.37
COPS3-209ENST00000486810 ASB1Q9Y576 335 aa6.51□□□□□ -1.37
COPS3-209ENST00000486810 C9orf118A6NHY6 69 aa6.5□□□□□ -1.37
COPS3-209ENST00000486810 DHX16O60231 1041 aaKnown RBP6.5□□□□□ -1.37
COPS3-209ENST00000486810 HIP1RO75146 1068 aa6.5□□□□□ -1.37
COPS3-209ENST00000486810 CYP7B1O75881 506 aa6.5□□□□□ -1.37
COPS3-209ENST00000486810 FBXO21O94952 628 aa6.5□□□□□ -1.37
COPS3-209ENST00000486810 CHGBP05060 677 aa6.5□□□□□ -1.37
COPS3-209ENST00000486810 SLC9A1P19634 815 aa6.5□□□□□ -1.37
COPS3-209ENST00000486810 PTX3P26022 381 aaPredicted RBP6.5□□□□□ -1.37
COPS3-209ENST00000486810 GJA9P57773 515 aa6.5□□□□□ -1.37
COPS3-209ENST00000486810 FRMD5Q7Z6J6 570 aa6.5□□□□□ -1.37
COPS3-209ENST00000486810 KIF18BQ86Y91 864 aa6.5□□□□□ -1.37
COPS3-209ENST00000486810 KIAA1958Q8N8K9 716 aa6.5□□□□□ -1.37
COPS3-209ENST00000486810 LSM14AQ8ND56 463 aaKnown RBP6.5□□□□□ -1.37
COPS3-209ENST00000486810 TMEM168Q9H0V1 697 aa6.5□□□□□ -1.37
COPS3-209ENST00000486810 OXSMQ9NWU1 459 aa6.5□□□□□ -1.37
COPS3-209ENST00000486810 RTEL1Q9NZ71 1219 aa6.5□□□□□ -1.37
COPS3-209ENST00000486810 FRMD4BQ9Y2L6 1034 aa6.5□□□□□ -1.37
COPS3-209ENST00000486810 KIF3AQ9Y496 699 aa6.5□□□□□ -1.37
COPS3-209ENST00000486810 MPHOSPH10O00566 681 aaKnown RBP6.49□□□□□ -1.37
COPS3-209ENST00000486810 B4GALT3O60512 393 aa6.49□□□□□ -1.37
COPS3-209ENST00000486810 IPO7O95373 1038 aaKnown RBP6.49□□□□□ -1.37
COPS3-209ENST00000486810 PEX19P40855 299 aa6.49□□□□□ -1.37
COPS3-209ENST00000486810 KCNJ4P48050 445 aa6.49□□□□□ -1.37
COPS3-209ENST00000486810 NFATC3Q12968 1075 aa6.49□□□□□ -1.37
COPS3-209ENST00000486810 C1QTNF12Q5T7M4 302 aa6.49□□□□□ -1.37
COPS3-209ENST00000486810 WDR78Q5VTH9 848 aa6.49□□□□□ -1.37
COPS3-209ENST00000486810 KANK2Q63ZY3 851 aa6.49□□□□□ -1.37
COPS3-209ENST00000486810 ESRP1Q6NXG1 681 aaKnown RBP6.49□□□□□ -1.37
COPS3-209ENST00000486810 ZNF662Q6ZS27 426 aa6.49□□□□□ -1.37
COPS3-209ENST00000486810 FERMT3Q86UX7 667 aa6.49□□□□□ -1.37
COPS3-209ENST00000486810 THNSL2Q86YJ6 484 aa6.49□□□□□ -1.37
COPS3-209ENST00000486810 CHTF18Q8WVB6 975 aa6.49□□□□□ -1.37
COPS3-209ENST00000486810 C16orf92Q96LL3 132 aa6.49□□□□□ -1.37
COPS3-209ENST00000486810 TIGD1Q96MW7 591 aa6.49□□□□□ -1.37
COPS3-209ENST00000486810 ELF4Q99607 663 aaPredicted RBP6.49□□□□□ -1.37
COPS3-209ENST00000486810 SUDS3Q9H7L9 328 aaPredicted RBP6.49□□□□□ -1.37
COPS3-209ENST00000486810 STK26Q9P289 416 aa6.49□□□□□ -1.37
COPS3-209ENST00000486810 SYNRGQ9UMZ2 1314 aa6.49□□□□□ -1.37
COPS3-209ENST00000486810 CCDC189A1A4V9 331 aa6.48□□□□□ -1.37
COPS3-209ENST00000486810 H0Y858 1186 aa6.48□□□□□ -1.37
COPS3-209ENST00000486810 H7C1D1 291 aa6.48□□□□□ -1.37
COPS3-209ENST00000486810 TGM5O43548 720 aa6.48□□□□□ -1.37
COPS3-209ENST00000486810 PDE8AO60658 829 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms