RNA–Protein interactions for RNA: ENST00000486720.1

APH1A-208, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-208ENST00000486720 RUFY4Q6ZNE9 571 aa16.32■□□□□ 0.2
APH1A-208ENST00000486720 MCPH1Q8NEM0 835 aa16.32■□□□□ 0.2
APH1A-208ENST00000486720 TCP11Q8WWU5 503 aa16.32■□□□□ 0.2
APH1A-208ENST00000486720 DHX38Q92620 1227 aaKnown RBP16.32■□□□□ 0.2
APH1A-208ENST00000486720 PLIN2Q99541 437 aa16.32■□□□□ 0.2
APH1A-208ENST00000486720 MTRQ99707 1265 aa16.32■□□□□ 0.2
APH1A-208ENST00000486720 NOC4LQ9BVI4 516 aaKnown RBP16.32■□□□□ 0.2
APH1A-208ENST00000486720 FAM49AQ9H0Q0 323 aaPredicted RBP16.32■□□□□ 0.2
APH1A-208ENST00000486720 SUGCTQ9HAC7 445 aa16.32■□□□□ 0.2
APH1A-208ENST00000486720 A0A087WWV3 80 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 TRIM43BA6NCK2 446 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 M0QZ92 97 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 USO1O60763 962 aaKnown RBP16.31■□□□□ 0.2
APH1A-208ENST00000486720 PARNO95453 639 aaKnown RBP16.31■□□□□ 0.2
APH1A-208ENST00000486720 TIMP1P01033 207 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 PLA2G4BP0C869 781 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 THPOP40225 353 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 STAT6P42226 847 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 CDC42EP1Q00587 391 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 TRIM71Q2Q1W2 868 aaKnown RBP16.31■□□□□ 0.2
APH1A-208ENST00000486720 IER5Q5VY09 327 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 CLEC17AQ6ZS10 378 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 KCNK18Q7Z418 384 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 SH3RF1Q7Z6J0 888 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 LINC01465Q8N7H1 131 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 SYT2Q8N9I0 419 aaPredicted RBP16.31■□□□□ 0.2
APH1A-208ENST00000486720 DNAJB3Q8WWF6 145 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 LARP4BQ92615 738 aaKnown RBP16.31■□□□□ 0.2
APH1A-208ENST00000486720 RAD54LQ92698 747 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 TRIM43Q96BQ3 446 aaPredicted RBP16.31■□□□□ 0.2
APH1A-208ENST00000486720 GBP4Q96PP9 640 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 PPP1R12CQ9BZL4 782 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 CUEDC2Q9H467 287 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 KCND2Q9NZV8 630 aa16.31■□□□□ 0.2
APH1A-208ENST00000486720 KAT6AQ92794 2004 aa16.3■□□□□ 0.2
APH1A-208ENST00000486720 ALPK3Q96L96 1907 aa16.3■□□□□ 0.2
APH1A-208ENST00000486720 SSBP05455 408 aaKnown RBP eCLIP16.3■□□□□ 0.2
APH1A-208ENST00000486720 CKBP12277 381 aa16.3■□□□□ 0.2
APH1A-208ENST00000486720 SELPP16109 830 aa16.3■□□□□ 0.2
APH1A-208ENST00000486720 CYP11B2P19099 503 aa16.3■□□□□ 0.2
APH1A-208ENST00000486720 CLCN3P51790 818 aa16.3■□□□□ 0.2
APH1A-208ENST00000486720 LRRC8DQ7L1W4 858 aa16.3■□□□□ 0.2
APH1A-208ENST00000486720 KIAA0319LQ8IZA0 1049 aa16.3■□□□□ 0.2
APH1A-208ENST00000486720 LRRC71Q8N4P6 559 aa16.3■□□□□ 0.2
APH1A-208ENST00000486720 IQUBQ8NA54 791 aa16.3■□□□□ 0.2
APH1A-208ENST00000486720 TMEM87AQ8NBN3 555 aa16.3■□□□□ 0.2
APH1A-208ENST00000486720 MRPS27Q92552 414 aaKnown RBP16.3■□□□□ 0.2
APH1A-208ENST00000486720 WNT8BQ93098 351 aa16.3■□□□□ 0.2
APH1A-208ENST00000486720 ZBTB10Q96DT7 871 aa16.3■□□□□ 0.2
APH1A-208ENST00000486720 TIPINQ9BVW5 301 aa16.3■□□□□ 0.2
APH1A-208ENST00000486720 BLOC1S4Q9NUP1 217 aa16.3■□□□□ 0.2
APH1A-208ENST00000486720 KCNH3Q9ULD8 1083 aa16.3■□□□□ 0.2
APH1A-208ENST00000486720 AKT3Q9Y243 479 aa16.3■□□□□ 0.2
APH1A-208ENST00000486720 LOXHD1Q8IVV2 1947 aa16.29■□□□□ 0.2
APH1A-208ENST00000486720 FAM237AA0A1B0GTK4 181 aa16.29■□□□□ 0.2
APH1A-208ENST00000486720 RSPH10B2B2RC85 870 aa16.29■□□□□ 0.2
APH1A-208ENST00000486720 RSPH10BP0C881 870 aa16.29■□□□□ 0.2
APH1A-208ENST00000486720 RFC2P35250 354 aa16.29■□□□□ 0.2
APH1A-208ENST00000486720 SLC12A3P55017 1021 aa16.29■□□□□ 0.2
APH1A-208ENST00000486720 MRPS6P82932 125 aaKnown RBP16.29■□□□□ 0.2
APH1A-208ENST00000486720 FAM26DQ5JW98 314 aa16.29■□□□□ 0.2
APH1A-208ENST00000486720 MFSD5Q6N075 450 aa16.29■□□□□ 0.2
APH1A-208ENST00000486720 SV2BQ7L1I2 683 aa16.29■□□□□ 0.2
APH1A-208ENST00000486720 TMEM199Q8N511 208 aa16.29■□□□□ 0.2
APH1A-208ENST00000486720 PDILTQ8N807 584 aa16.29■□□□□ 0.2
APH1A-208ENST00000486720 FSIP1Q8NA03 581 aa16.29■□□□□ 0.2
APH1A-208ENST00000486720 PSPC1Q8WXF1 523 aaKnown RBP16.29■□□□□ 0.2
APH1A-208ENST00000486720 LBHD1Q9BQE6 289 aaPredicted RBP16.29■□□□□ 0.2
APH1A-208ENST00000486720 PANK2Q9BZ23 570 aa16.29■□□□□ 0.2
APH1A-208ENST00000486720 LRRC27Q9C0I9 530 aa16.29■□□□□ 0.2
APH1A-208ENST00000486720 MAGEF1Q9HAY2 307 aa16.29■□□□□ 0.2
APH1A-208ENST00000486720 XPNPEP1Q9NQW7 623 aa16.29■□□□□ 0.2
APH1A-208ENST00000486720 SUCLA2Q9P2R7 463 aaPredicted RBP16.29■□□□□ 0.2
APH1A-208ENST00000486720 USP25Q9UHP3 1055 aa16.29■□□□□ 0.2
APH1A-208ENST00000486720 ZMYND8Q9ULU4 1186 aaPredicted RBP16.29■□□□□ 0.2
APH1A-208ENST00000486720 TRPV2Q9Y5S1 764 aa16.29■□□□□ 0.2
APH1A-208ENST00000486720 POLR2DO15514 142 aaKnown RBP16.28■□□□□ 0.2
APH1A-208ENST00000486720 ASAP2O43150 1006 aa16.28■□□□□ 0.2
APH1A-208ENST00000486720 PFKFB1P16118 471 aa16.28■□□□□ 0.2
APH1A-208ENST00000486720 GUCY2CP25092 1073 aa16.28■□□□□ 0.2
APH1A-208ENST00000486720 CYP2C18P33260 490 aa16.28■□□□□ 0.2
APH1A-208ENST00000486720 MXD4Q14582 209 aaPredicted RBP16.28■□□□□ 0.2
APH1A-208ENST00000486720 ZNF618Q5T7W0 954 aa16.28■□□□□ 0.2
APH1A-208ENST00000486720 RINT1Q6NUQ1 792 aa16.28■□□□□ 0.2
APH1A-208ENST00000486720 DHX58Q96C10 678 aa16.28■□□□□ 0.2
APH1A-208ENST00000486720 BMP2KQ9NSY1 1161 aaPredicted RBP16.28■□□□□ 0.2
APH1A-208ENST00000486720 HPSEQ9Y251 543 aa16.28■□□□□ 0.2
APH1A-208ENST00000486720 ARID2Q68CP9 1835 aa16.28■□□□□ 0.2
APH1A-208ENST00000486720 TCHHQ07283 1943 aa16.27■□□□□ 0.2
APH1A-208ENST00000486720 A0A087X0B3 334 aa16.27■□□□□ 0.2
APH1A-208ENST00000486720 A0A1B0GVL5 298 aa16.27■□□□□ 0.2
APH1A-208ENST00000486720 CTSHP09668 335 aa16.27■□□□□ 0.2
APH1A-208ENST00000486720 IQCF3P0C7M6 154 aa16.27■□□□□ 0.2
APH1A-208ENST00000486720 SYN1P17600 705 aa16.27■□□□□ 0.2
APH1A-208ENST00000486720 AMPD3Q01432 767 aa16.27■□□□□ 0.2
APH1A-208ENST00000486720 MKRN4PQ13434 485 aaPredicted RBP16.27■□□□□ 0.2
APH1A-208ENST00000486720 MCM6Q14566 821 aa16.27■□□□□ 0.2
APH1A-208ENST00000486720 E2F4Q16254 413 aa16.27■□□□□ 0.2
APH1A-208ENST00000486720 NAALADL2Q58DX5 795 aa16.27■□□□□ 0.2
APH1A-208ENST00000486720 FAM102BQ5T8I3 360 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms